KEGG   Latimeria chalumnae (coelacanth): 102356446
Entry
102356446         CDS       T02913                                 
Symbol
NUP88
Name
(RefSeq) nucleoporin 88
  KO
K14318  nuclear pore complex protein Nup88
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102356446 (NUP88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102356446 (NUP88)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102356446 (NUP88)
SSDB
Motif
Pfam: Nup88 STX6_10_61_N
Other DBs
NCBI-GeneID: 102356446
NCBI-ProteinID: XP_014353058
Ensembl: ENSLACG00000018231
LinkDB
Position
Un
AA seq 721 aa
MAGTSGDRWRRELASHQIFLRLQENVRGEAESTAKAPAKNLLFNLDGDLFLWDGDNSVFY
TTNLRQLNSEQPSPAAPYQTLLCINPPLFEVHQVLLSPTQHHVVLIGSKGLMVLELPQRW
GKRSEFEGGKDTVNCRTISIAERFFTSSTSLTLRHAAWYPSETEEPHLLLLTSDNSLRIY
SLKEPQTPLKVLSLSQSEEESVLLPRGRSYTAPMGEVAVAFDFGPLVAVSSHLVGQKGKE
EVQAFPLYILYENGETFLMYLFLSHGIGSFGKLLGPLPMHPAAEDNYGYDACAVLCLPCV
PNILVIATESGMLYHCVVLEAEEEEDQTSSESWDPRSEMVPSLYVFECVELELALKLPSG
EEEEPMESDFSCPISLHRDPLCQSRYHCTHEAGVHSVGLTWLNKFQKFLASDEEDKDGLQ
ELAAEQKCIVEHILCTRPLPCSQSAPIKGFLIICDLSLGASMICITNAFECITRPLLSTI
RPASPPLLCSKAESELAASPLRTFAVDSFEKHIRNILKRTSTNPVFLKASEKETSPPPQE
CLQLLSRATQVFREEYIIKQDLAREEIQRRVKLLRGQKEKQLEDLEHCIEERKNLREMAE
RLADKYEEAKEKQDIIMNRMKKVLRSFSSQLPVLSDSEKDMKKELNTINGQLRHLGNTIK
QVKMKMEYQNRQTEKGASPRKSTLSLSDYQKKCIYNVLKEDGEHIAEIVKQLNDIRSHVD
F
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggggacgagcggggaccggtggcgacgcgagctagcatcccaccaaatattcctc
agactccaggagaacgtgagaggcgaggcggaaagcacagccaaggccccggccaaaaac
ctcctcttcaacttggacggcgatctcttcctgtgggatggagacaatagtgttttttat
accaccaatttgagacagctaaactcggagcagccgtcccccgccgcgccttaccagaca
ctactgtgcataaatcctcccctgtttgaagttcaccaagttctgctgagtcccacacaa
catcacgtagtgcttattggaagtaaaggcctgatggtacttgaactaccacagcgctgg
gggaagagatctgaatttgaaggcggcaaagacactgttaattgcaggacaatttctatt
gctgaaagattcttcaccagttcaacatcactaaccttgagacatgctgcctggtaccca
agtgaaacagaggagccacatctactgttgttaacttctgataactctttaaggatttat
agtctaaaggagccccagactcctctgaaagttctctccctctctcagtcagaagaggaa
agtgtgctgctgcctagagggagatcgtatacagcacccatgggtgaagttgcagtggca
tttgattttggccctttggttgcagtttctagtcacctagtcggtcagaaaggaaaggag
gaggtccaggcctttcctctgtatatcttgtatgaaaatggagagacattcttgatgtac
cttttcctctcacacggcattggaagttttgggaagttactaggtcctttacccatgcac
ccagctgctgaagataactatgggtatgatgcctgtgctgtgctgtgcctgccctgtgta
cccaacattctggttattgctacagagtcagggatgttgtatcactgtgtggtactggag
gcagaggaagaggaagaccaaacttcaagtgagtcctgggacccgaggtctgagatggta
ccctctctatacgtctttgagtgtgtggagttggagctggcattgaagctcccatctgga
gaagaggaggagcccatggagtcagatttctcctgtccaatcagcttacatagagaccct
ttatgtcagagccggtatcactgcacacatgaagcgggagtgcacagtgttggacttacg
tggctcaataaattccaaaagttccttgcctcagatgaggaagacaaagatggccttcaa
gagctggcagcagaacagaagtgcattgttgaacacatcctttgtaccagaccgctgcca
tgcagccaatctgctccaatcaaaggattcttgatcatctgtgacctgtctctaggagcc
tcaatgatctgcatcactaatgcatttgaatgcatcacaagacctctgctcagcacaata
cggccagcttcaccacctcttctgtgttccaaagcagagtcagaattggcagcatcacca
ctacggacctttgcagttgattcatttgaaaagcatatcaggaatattctgaaacgcacc
tcaactaacccagtgttcttgaaggcatctgaaaaggagactagcccccctccacaggag
tgtcttcagctcctaagccgagccacacaggtgttccgggaggagtatataattaaacag
gacctggccagagaagagatacagcgcagagtgaagctcctgcgtggacaaaaagaaaag
cagcttgaagaccttgaacattgtatcgaggaaaggaagaatctgcgggaaatggccgag
cgactggctgataaatacgaggaggcaaaagagaaacaagacattatcatgaatagaatg
aagaaagtgttacgtagctttagctcacaacttccagttctgtccgacagtgagaaagac
atgaaaaaagaactaaacactataaatggtcagctacggcacctgggaaacactatcaaa
caggtaaagatgaaaatggaataccagaatcgacagacagaaaagggagccagtccgcgg
aaatccactctctcactcagcgactatcagaagaaatgcatttacaatgtactgaaggag
gatggtgaacacatagctgaaatagtaaagcagctgaatgacattcgaagccatgtggat
ttctga

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