KEGG   Latimeria chalumnae (coelacanth): 102356465
Entry
102356465         CDS       T02913                                 
Symbol
FMR1
Name
(RefSeq) fragile X mental retardation 1
  KO
K15516  fragile X mental retardation protein
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102356465 (FMR1)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102356465 (FMR1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     102356465 (FMR1)
   mRNA cycle factors
    Stress granule specific factors
     102356465 (FMR1)
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 FXMR_C2 Tudor_FRX1 KH_1 Agenet KH-I_KHDC4-BBP KH_2 KIF2A-like_1st DUF7636
Other DBs
NCBI-GeneID: 102356465
NCBI-ProteinID: XP_005991925
LinkDB
Position
Un
AA seq 564 aa
MEELLVEVRGSNGAFYKAFVKDVHEDSVTVTFENNWQPERQIPFHDVRFPPPVGYQKDLN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRPINPSKP
ATKNTFNKIRLDVPEDLRQMCAKESSHKDFKKAIGAFSVTYDSESNQLIILSINDVTAKR
ATMLSDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDHEAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKKNPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGASSRPPPNRSDKDRGYIADESVGLGRGGKPYSARGRSRRGP
SYTSGTNSEASNASETESDHRDELSDWSLAPTDEDRDGYPRRGDGRRRGGGRGHGGRGRG
GYKGSEEFLRTDNRPRNLRETKGRTTDVSLQIRIDCSNERSVHTKPSQNTSSEGSRQRMG
KERSQKKEKSEILDSSQVLVNGVP
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggaggagttacttgtggaggtgcggggttccaatggggccttttataaggcgtttgtg
aaggatgtacatgaagattcagtgaccgtaacgtttgaaaacaactggcagccagaacgt
cagattccattccatgatgtacggtttccaccaccagtagggtatcagaaagatcttaat
gaaagtgatgaagtagaggtttattccagagcaaatgaaaaagagccttgttgctggtgg
ctagcaaaagtcagaatgattaaaggcgagttctatgtaattgagtatgcagcctgtgat
gctacttacaatgaaatcgtcacaattgaaaggttacgacctatcaatccaagcaaacca
gcaacaaagaacacttttaacaaaatcagactggatgttccagaagatttacggcaaatg
tgtgccaaagagtcgtcacataaagactttaaaaaggccattggagctttttctgttaca
tatgattctgaaagcaaccagcttattatattgtccatcaatgatgtaacagcaaaacga
gcaactatgttgagtgatatgcactttcgaagtcttcgtaccaagttgtctttgatcttg
aggaatgaagaagccagcaaacaactagagagctccagacagcttgcatcccgttttcat
gaacaatttgttgtgcgagaagatctcatgggtcttgcaattggtactcatggtgccaac
atccagcaagctaggaaagtacctggggtaacagctattgatttggatgaagacacatgt
acttttcacatctatggggaggatcatgaggctgttaagaaagccagaagttaccttgag
tttgctgaggatgttatacaggtgccaagaaatttagtaggaaaagtaattggaaaaaat
ggaaaactcattcaggagatagtggacaaatcaggtgttgttcgtgttaggattgaagct
gaaaatgataaaaagaatccacaagaggagggtatggtcccatttgtgtttgttggtaca
aaggatagtatcactaatgctactgtacttctagattatcatcttaattatctgaaggaa
gtggatcagctgcgcctggaaagattacagatcgatgaacaattacgacagataggagca
agttcaaggcccccaccaaaccgttcggataaagaccgaggatatattgctgatgaaagc
gtggggctagggcgtggtggcaaaccttacagcgctcgagggcgcagtaggcgaggtcca
agctatacatcaggaacaaactctgaagcatcaaatgcttctgaaacagaatctgatcac
agagatgaactgagtgattggtcactggctccaacagatgaagatcgagatggatatcct
cgcagaggtgatggccgcaggcgtggtggtggacgtggtcatggagggaggggccgtgga
ggatacaaaggaagtgaggagtttttgagaactgataaccgaccacgcaatttaagagaa
acaaaaggaaggacaacagatgtttccctacagatcagaattgattgtagtaatgaaagg
agtgtacatacaaagccatctcagaatacctccagtgaaggtagtcgacagcgcatgggt
aaagaacgcagtcagaagaaggaaaagtcggaaattctggatagctcacaagtgctggtg
aatggagtaccttaa

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