Latimeria chalumnae (coelacanth): 102356588
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Entry
102356588 CDS
T02913
Symbol
GRIK5
Name
(RefSeq) glutamate ionotropic receptor kainate type subunit 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102356588 (GRIK5)
04082 Neuroactive ligand signaling
102356588 (GRIK5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102356588 (GRIK5)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Glutamate (ionotropic)
102356588 (GRIK5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
102356588
NCBI-ProteinID:
XP_005998054
Ensembl:
ENSLACG00000011972
LinkDB
All DBs
Position
Un
AA seq
802 aa
AA seq
DB search
MLTVLAGLLRLEDLIRQFLISKDTLSIRMLDDTNDPTPLLKEIRDDKVATIIIDANASVS
YLILKKASELGMTSAYYKYILTTIDFPLLRLDGIVDDHSNILGFSMFNTSHPFYMEFVRS
LNMSWRENCELTPYPGPALSSALMFDAVHVVAGAVRELNRSQEIGVKQLSCNTPQIWPHG
TSLMNYLRMVEYDGLTGHVEFNSKGQRTNYTMRILEKSQDGHREIGVWYSNNTLAMNATT
LDINISETLTNKTLIITTILENPYVMRKVNYQDYHGNERYEGFCVDMLRELSGILKFNFK
IKLVDDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISI
LYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCILFLAARLSPYEWYNPHPCLRERH
DVLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFL
TVQRMEVPIESADDLADQTNIEYGTIHGGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVK
STEEGIARVLNSKYAFLLESTMNEYHRRHNCNLTQIGGLLDTKGYGIGMPLGSTFRDEIT
LAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAI
MEFVWSTRRSAETDEISVCQEMLSELRNAVSCKKNSRSRRRRRHGRIMLSMSKPLRMARE
MRLSNGKLYSGAPSSETGPGPGPQQRLIEEPALPARSCTHIRICQECRRIQTLRAARAPR
IPIPPGEDTERRGQPADISEQE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgctaacagttctggcaggtctcctgcgattggaagacctgatccgccagttccttatc
tccaaggacaccctgtcgatccggatgctggacgacaccaacgaccctacgccgctgctg
aaggagatccgggacgacaaggtcgccaccatcatcatcgatgccaacgcttccgtctcc
tatctcatactgaagaaggcctcggagctgggaatgacctctgcttattacaaatacatc
ttaaccacaatagacttcccgctgctgagactggacggcatcgtggatgaccactccaac
atcctgggcttttccatgttcaacaccagccaccctttctacatggagtttgtccgaagc
ctcaacatgtcctggcgtgaaaactgtgaactcaccccctacccgggtcctgccttatct
tctgcactgatgtttgatgcggtgcacgtggtggcgggtgctgtgcgggagctgaacagg
agtcaagagattggcgtgaagcagctgtcatgcaacaccccccagatctggccacatgga
accagtctgatgaactacctacggatggtggagtacgacgggttaacaggtcacgtggag
ttcaacagtaaaggtcaaaggacaaattacaccatgaggatactggagaagtcccaggat
gggcacagagagataggtgtctggtactccaacaatactttggccatgaacgcaaccacc
ttggacatcaacatctccgagaccctcacgaacaaaactctcattataaccaccatcctg
gaaaatccctacgtgatgcggaaggtgaactaccaggattaccatggcaatgagcgctac
gagggtttctgcgtggacatgctgagggagctctctggcatcctcaagttcaacttcaag
atcaagctggtggacgacggtttatacggcgctccagagcccaacgggtcctggactggc
atggtgggggagctcattaaccggaaagccgacctggctgtagctgccttcaccatcacg
gcggagagagagaaagtgattgacttctccaagcccttcatgacgctgggaatcagtatt
ctctatcgggtccacatgggacggaagccgggttatttttccttcctggatccgttctcc
ccagcagtctggttgtttatgctccttgcgtacctcgctgtcagctgcatcctcttcctc
gccgctaggttgagcccgtatgagtggtacaacccccacccgtgcctaagggagagacat
gacgttttggaaaaccagtacaccttggggaacagcctgtggttcccagttgggggattc
atgcaacagggctcagagattatgcctcgggcactctccacacgctgtgtcagtggggtc
tggtgggcttttacgttaattattatctcctcctacacagccaacttggctgcctttctc
actgtccagcggatggaggtcccgatcgagtcagcagatgacctcgctgaccagacgaac
attgagtacgggacgatccatgggggctcaaccatgaccttcttccagaactcccgttac
cagacgtaccagcggatgtggaactacatgcagtcaaagcagcccagcgtcttcgtgaag
agcacggaggagggcatcgccagggtcctgaactccaagtacgcctttctgctggagtcg
accatgaacgagtatcatcggcggcacaactgcaacctcacgcagatcggggggcttctt
gacaccaagggttacggcatcggtatgccactggggtccacgtttcgagatgagatcacg
ctggcgatcctgcagcttcaggaaaacaaccgtctggagatcctgaagcggaagtggtgg
gagggggggaagtgtccgaaagaggaggaccaccgagccaaaggtttggggatggagaac
attggaggaatctttgtggttctgatttgtggtttgatcatcgccgtgttcgtggcgatc
atggagtttgtatggtcaacccggcgctcggcagaaacagacgagatttcggtttgtcag
gagatgctgagtgagctacggaacgctgtatcctgcaaaaaaaactcgcggtcacgccgg
aggagacgtcacggccggataatgctgtccatgtccaagcctttgcgcatggcgcgggag
atgagactcagcaacgggaaactgtactccggggccccctcctccgagacggggcccggc
cccggcccccagcaacgccttatagaggaaccggccctgccggcccgcagctgcacgcac
atccgcatctgtcaggaatgcagaaggatacagactctaagggcggcccgcgctccgaga
attccgatcccaccgggggaggacactgagaggagaggccagccagcggacatcagtgaa
caggagtga
DBGET
integrated database retrieval system
