Latimeria chalumnae (coelacanth): 102356645
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Entry
102356645 CDS
T02913
Symbol
LRRC4B
Name
(RefSeq) leucine rich repeat containing 4B
KO
K16360
netrin-G3 ligand
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04514
Cell adhesion molecule (CAM) interaction
lcm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102356645 (LRRC4B)
04517 IgSF CAM signaling
102356645 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102356645 (LRRC4B)
Cell adhesion molecules [BR:
lcm04515
]
Immunoglobulin superfamily
NGL family
102356645 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRR_NXF1-5
VEGFR1-3_N_Ig-like
LRRNT
LRR_RPS2
DUF7617
Calcyon
Big_6
Motif
Other DBs
NCBI-GeneID:
102356645
NCBI-ProteinID:
XP_005991042
Ensembl:
ENSLACG00000010297
LinkDB
All DBs
Position
Un
AA seq
647 aa
AA seq
DB search
MTTEHRTRKISGPPAFRMIARRVLLVLWVSALATGMAEAASSTSCPDVCNCSNQASRVIC
TRRDLVDVPESISINTRYLNLQENVIQVIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGL
TSLRRLWLMHAQVAIIERNAFDDLKSLEELNLSHNNLMSLPHDLFTSLHRVERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHSPPNLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTATATLNVTAADVTNSYSYFTTVTVETVETVVEEKPTLNDPGPTPAV
NWETPHSTTSLMPRSTRSTEKTFTIPITDVTENIIDGLDDVMKTTKIIIGCFVAITFMAA
VMLIVFYKLRKQHQLHKHHGPTRTIEIINVEDEIPATATATSGNPGDSHMTLPVIERDHL
NHYATYKAHYNNNTGTLNCVKNPILNSVHEPLLFKSSSKENVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgactacggagcatcgaacccgaaaaatttcgggacctccagcctttagaatgatcgcc
cgtcgtgtcctgctggtgctgtgggtgtctgcactggccacgggcatggcagaggcggcc
tcctccacttcctgcccggacgtgtgcaactgtagcaaccaggcgagccgtgtgatctgt
accaggagggacctagtggacgtgccggaaagcatctccatcaatacacgctacctgaac
ttgcaggagaacgtcatccaggtcatcaaaactgacaccttcaaacacctgaggcacctg
gagatcctacagctcagcaaaaacttaatccgtaagatcgaagtgggagccttcaatggc
ttgcccaacctcaacactttggaactctttgataatcggttgaccactgtcccaacgcaa
gcctttgagtacctctccaagttgagggagctgtggttgaggaacaaccccatcgagagc
atcccttcatatgccttcaaccgggtgccttccttgcggaggctggacctgggggagttg
aaaaagttggaatacatctcggaggctgcttttgagggcttggtcaacctccggtatctc
aacctgggcatgtgcaacctgaaggacattcccaacctcacggccctagtgaggttggaa
gagttggagttatctgggaaccggctggagataatccggccagggtccttccagggcttg
acgagtctgcgtcgtctgtggttaatgcatgcccaagtggccatcattgagaggaacgct
tttgatgatctcaaatctttggaagagctcaacctgtcccacaacaacctcatgtctctt
ccccatgacctcttcacatctctccaccgggtggagagggtgcacctcaaccacaatccc
tggcattgcaattgtgatgtgctttggcttagttggtggctgaaggagacagtgcccaac
aacaccacctgttgtgcccgctgccattccccgcccaacctgaagggacgctacataggt
gagctggaccagagccattttacctgctatgcgcctgtcattgtggaacccccaactgac
ctcaacgtgacagagggcatggcggcagagctcaagtgtcgcacaggcacctccatgacc
tcagtgaactggctgactcccaatggcacgctgatgacacatggctcctatcgggtgcgg
atctcagtcctgcacgacggtacactcaatttcaccaatgtgacggtccaggacacaggc
cagtacacgtgcatggtgactaactctgcgggcaacaccacggccactgccacgcttaat
gtcacagcagccgatgtcaccaacagctacagctacttcaccacagtgacggtggagaca
gtggagactgtggtggaagaaaaacctacattaaatgacccaggaccaaccccggctgtt
aactgggagacaccacactctaccacctcactgatgccacgcagcacccgctctacggag
aagaccttcaccatccccatcacggatgtaacagagaatatcattgatgggttagatgat
gtcatgaagacgacaaagatcatcattggctgctttgtagccatcaccttcatggcagct
gtgatgctcattgtgttttacaaactgcgcaagcagcaccagctccacaagcaccacggg
cccacacgcaccatcgaaattatcaatgtggaggatgagatcccggctaccgccaccgcc
acctctggcaaccctggcgacagccacatgacactgcctgtcattgagagggaccacctc
aaccactatgccacatataaggcacactacaacaacaatacgggcacgctgaactgcgtg
aaaaaccccatcctcaactccgtccatgagcctttactcttcaagagcagctccaaggag
aatgtgcaagagactcagatttga
DBGET
integrated database retrieval system
