KEGG   Latimeria chalumnae (coelacanth): 102356687
Entry
102356687         CDS       T02913                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog
  KO
K11988  sonic hedgehog
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    102356687 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcm01002]
    102356687 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lcm00536]
    102356687 (SHH)
Peptidases and inhibitors [BR:lcm01002]
 Cysteine peptidases
  Family C46: hedgehog family
   102356687 (SHH)
Glycosaminoglycan binding proteins [BR:lcm00536]
 Heparan sulfate / Heparin
  Morphogens
   102356687 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 DUF6212
Other DBs
NCBI-GeneID: 102356687
NCBI-ProteinID: XP_006001335
Ensembl: ENSLACG00000011470
UniProt: H3ATP8
LinkDB
Position
Un
AA seq 421 aa
MDEMLLLTRIVLVGLICSSLVSSGLTCGPGRGYGRRKYPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGLATVTLEDGGTKFVKDLSPGDRVLAADDQGKLVYSD
FLMFLDKEEESQKVFYVIETKEPLKRITLTAAHLLFVAQNSSDNLSPFKATFASEIKPGQ
IIFVAHGDDTHLMAATVERVVLEEDTGAYAPLTNQGTILINRVWASCYAVIEQHKWAHWA
FAPVRMGYVISSLFFPKDILKYNGTFQENGVHWYSKTLYQIGTWVLDNDYIHPLGMPERS
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaattgtgttggtgggcttgatttgctcttctttg
gtctcctccgggctgacttgtggaccaggcagaggctatggaagaagaaagtaccccaaa
aagctgacccctttagcctacaagcagtttatcccgaatgtggcagaaaagaccttgggg
gccagtggtagatatgaagggaagatcaccagaaattccgagcgatttaaagagctgacc
cctaattacaaccctgacatcatttttaaagatgaagagaatacgggggctgataggcta
atgacacagagatgtaaggataaactgaattcgttggctatctcagtgatgaaccagtgg
ccaggggtaaagctaagggtgactgagggctgggatgaagatggacatcattctgaggaa
tccctccactatgagggcagagctgtggacatcaccacttcagacagggacagaagtaaa
tacggcatgttggccagactggctgttgaagctggatttgactgggtctactatgaatct
aaagcccatattcattgctctgtcaaagcagagaactctgtagcagcaaaatcagggggt
tgctttcctggattagccactgtgactctagaggatggaggcaccaagtttgtcaaagat
ctgagccctggggaccgagtcctagcagcagatgatcagggaaagctggtctacagtgac
ttcttaatgttcctggacaaagaagaagaatcccaaaaagttttttatgtaatagaaaca
aaagaacctctcaaaagaattaccctcactgcagctcaccttctgtttgtagcacaaaac
tcgagtgataacttatcacctttcaaggcaacttttgccagtgaaattaaacctggtcaa
ataatatttgttgctcatggggatgatacgcatcttatggccgctacagtagaaagggta
gttttggaagaggatactggtgcttatgccccactgacgaaccaaggaactatcctcatt
aatcgagtttgggcttcttgctatgctgtgatagaacaacacaaatgggcacattgggca
tttgcacctgtaaggatggggtatgtgatctcttccttattttttccaaaagacattcta
aagtacaacggcacgtttcaagaaaatggtgttcattggtattccaaaactctatatcaa
ataggaacatgggtcttagacaatgactatattcatcctcttgggatgccagaaaggtct
agttga

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