Latimeria chalumnae (coelacanth): 102356715
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Entry
102356715 CDS
T02913
Symbol
CACNA1S
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04020
Calcium signaling pathway
lcm04260
Cardiac muscle contraction
lcm04261
Adrenergic signaling in cardiomyocytes
lcm04270
Vascular smooth muscle contraction
lcm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102356715 (CACNA1S)
04020 Calcium signaling pathway
102356715 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102356715 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
102356715 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
102356715 (CACNA1S)
04270 Vascular smooth muscle contraction
102356715 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102356715 (CACNA1S)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102356715 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
CAC1F_C
PKD_channel
DUF2670
Motif
Other DBs
NCBI-GeneID:
102356715
NCBI-ProteinID:
XP_005988501
Ensembl:
ENSLACG00000017615
LinkDB
All DBs
Position
Un
AA seq
1858 aa
AA seq
DB search
MEPNAVPDTNSLQRKKQKEKAKKQMNAGSPRPARALFCLNLQNPIRKACISIVEWKPFEI
IILLTIFANCIALAVFLPMPEDDTNNTNSSLEKVEYIFLIIFTIEATLKIIAYGFLFHPD
AYLRNGWNILDFIIVFVGLCTVALEQISRIQGGTAPVGGKGAGFDVKALRAFRVLRPLRL
VSGVPSLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIIGLELFMGKMHKTCYYVGSDVVA
TVENEKAAPCASAGHGRHCTLNMTECRTGWPGPNNGITHFDNFGFAMLTVYQCITMEGWT
DVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGAFQKLRE
RQQLEEDLKGYLDWITHAEVMDPDQERGEGILQSDENGSETDSLYEIEGMNKCILFFRRW
RRWNRLFRRKCRAVVKSKFFYWLVILLVFLNTLTIASEHHNQSDWLTSVQDTANKVLLAL
FTAEMLLKMYALGFQPYFMSLFNRFDCFVVCGGILETILVEANIMSPLGISVLRCIRLLR
IFKITRYWTSLSNLVASLLNSVRSIASLLLLLFLFMIIFSLLGMQVFGGKYNFDDLEVRR
STFDNFPQALISVFQILTGEDWNSVMYNGIIAYGGPSFPGVLVCIYFIILFVCGNYILLN
VFLAIAVDNLADAESLTSAQKAKAEEKKRRKMARSSHPEKSEEEKQLLLKKLEQKAKGEG
IPTTAKLKIDEFESNVNEIKDPYPSADFPGDDEEEEPEIPLSPRPRPLAELQLKEKAVPM
PEASAFFIFSPTNKIRVLCHRIVNATTFTNFILLFILLSSISLAAEDPIRPDSFRNQILN
YFDIVFTVIFTTEIVLKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAISVV
KILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFACIGVQLFKGK
FYSCTDVSKMTEEECKGYYVMYKEGDVHQLELRERKWVNSDFNFDSVLSAMMALFTVSTF
EGWPQLLYKAIDSHAENMGPIYNYRIEIAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGE
QEYKNCELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFALILLNTI
CLGMQHYGQSDEISYLSDMLNVVFTGLFTLEMVLKLLAFKVKGYFSDPWNVFDFLIVIGS
IIDVVLSEIDDSEDTSRISITFFRLFRVMRLVKLLSRGEGVRTLLWTFIKSFQALPYVAL
LIVMLFFIYAVIGMQVFGKVAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLGC
SYGKLCDPESDYNPGEEYTCGSSFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWS
ILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVSMN
MPLNSDGTVTFNATLFALVRTALKVKTEGNFEQSNEELRAIIKKIWKRTSMKLLDQVIPP
IGDDEVTVGKFYATFLIQDHFRKFMKRQEEYYGYRPKKSAVEIQAGLRSIEEEAAPEIHR
TISGDLTAEEELERAMEEEIYRRSGGLFGNHVDHFPMETSSPLQPHVTSQRPLQFSESRG
EDLESPVFLPNEVEFFPSGSSANVNNANNNAIARMYLEDELNKEIPQACDSTERGLSIKR
RSRPLSMPERKLSFHLDHLKRRLTQQTDDTTIEMTELRGFAQQEPEVIVDPGSEQDGRVS
QSSDPERLRASGQHQQRETVLRTPATDKLIQKVLVSGGLGCLASDPSLVAVTKQEMASAC
HMAIDDLESAAVGLLHDWKSQAGLSHPPQHTPSETSLCNVHELEDTSSDGEVTSVSTL
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacgctgttcccgacacaaattcgcttcagcgaaagaagcaaaaggaaaag
gccaaaaaacagatgaatgctggatctcccagaccagccagggctttattctgtttgaat
ttacaaaaccccatccggaaagcctgcatcagcattgtggaatggaaaccctttgagatt
atcatcttgctgaccatcttcgccaactgcatagccctggcagtgttcctccctatgcca
gaggatgataccaacaacaccaactctagtctggaaaaagtcgagtatatcttcctaata
atcttcacaatagaggcaaccttaaagatcatagcgtatggattcctgtttcacccggac
gcatacctccggaatggctggaatatattggacttcataatagtatttgttgggctctgc
acagtggctctggaacagatcagccggattcaaggcgggaccgctccggtgggtggcaaa
ggagcagggtttgatgtgaaggcattgagagctttccgagtcctgaggcctctccgtctt
gtgtcaggagtgccaagcttgcaggttgtgttgaattccattatcaaagccatggttcct
ctgctgcacattgcactgctggtgctcttcatgatcatcatctatgccatcatcgggctg
gagctattcatgggcaagatgcacaaaacctgctattacgttggatcagacgtcgtcgcc
actgtggagaacgagaaagcggcaccctgcgccagtgccggtcacggccgccattgcacc
ttaaacatgacagagtgcaggactggttggcctggaccaaacaatggcattacccacttt
gataacttcggattcgccatgctgacagtgtaccagtgcatcactatggagggatggacc
gatgtcctttattgggtcaatgatgcgattggtaatgaatggccctggatctattttgta
agcctgatcttgctgggctctttcttcgtcttgaacctggtgctgggtgtcctcagcggg
gagtttacgaaggagcgagagaaagcaaaatctcggggtgcatttcagaagctgcgtgag
agacagcagctagaggaggatttgaagggctatttggactggatcactcatgctgaggtt
atggacccagaccaggaaagaggagaagggattttgcagtctgacgagaacggctctgaa
acggacagtctgtacgagattgaggggatgaacaagtgcattctcttcttccggcgttgg
cgccgctggaaccgcctgttccgcaggaagtgccgggctgtggtgaagtccaagttcttc
tactggcttgtgatcctgttggtgttcctcaacaccttgaccattgcgtcggaacaccac
aaccaatccgactggctcaccagcgtgcaagacacagcaaacaaagttctcctggccttg
ttcacggctgagatgttactgaagatgtacgccctgggcttccaaccctacttcatgtct
ctctttaaccgctttgactgctttgtggtatgtgggggcattctggagaccatcctcgtg
gaagcgaacatcatgtctcccctcggcatctctgtgctgaggtgtattcgcctcctgagg
atctttaaaatcaccagatattggacttccctgagtaatctggtggcctctctgttgaac
tcagtccgctccatcgcctccttactgctcctgctctttctcttcatgatcatcttctcc
ctgctggggatgcaggtcttcggagggaaatacaactttgatgacttggaggtcaggagg
agtacctttgataactttccccaggcgctcatcagcgtcttccagatcctgacgggagag
gactggaactcggtgatgtacaatgggatcattgcatatggagggccctccttccccggt
gtcctcgtctgcatttacttcattattctgtttgtctgtgggaactatatcctactgaat
gttttcctggccatcgccgtagataatctcgctgatgcggaaagcctaacctcagctcag
aaagccaaggcagaggagaagaagagaagaaaaatggccaggagtagtcacccagagaaa
tcagaggaggagaagcagctgttgttgaagaaactggagcagaaagccaagggcgaagga
attcccaccactgctaagctcaaaatagatgagtttgaatcaaatgtgaatgaaatcaag
gacccctatccttctgcagacttcccaggtgatgacgaggaggaggaacccgaaatcccc
ctaagtccccgcccacgtccactggcagagctacagctcaaagagaaggcagtgcctatg
cccgaggctagcgctttcttcatctttagtccaacaaacaagatccgagtgttgtgtcac
agaattgtcaatgccaccactttcaccaacttcatcctgctcttcatcctgctcagtagc
atctcattggccgctgaggaccccattcggcctgattctttcagaaaccagatccttaat
tattttgacattgtcttcacggtcatctttactacagaaatcgtcttaaagatgacagca
tatggggctttcctgcacaagggttccttttgccgtaactacttcaacattcttgacttg
ctggtggtcagtgtgtctctaatatcctttggaatacagtccagtgctatctctgttgtg
aagattttgagggtgttgagggtcctgagaccactaagagccattaacagagcaaagggg
ttgaagcacgtggttcagtgtgtctttgtagccatcaaaacgatagggaacattgtgatt
gtcaccactctactacagttcatgtttgcctgcatcggagttcagctgttcaaggggaaa
ttctacagctgcacagatgtctctaagatgacagaagaagaatgcaaggggtactatgta
atgtacaaggagggggatgtacaccagttggagctgcgggagaggaagtgggtgaacagc
gattttaatttcgatagtgtcctctcggccatgatggcactcttcactgtttccaccttt
gagggctggcctcagctcctgtacaaagctattgactcccacgcagagaacatgggtccc
atttacaactatcgcatcgagatcgccatcttcttcatcatctacatcatcctcatcgcc
ttcttcatgatgaacatctttgtggggttcgttattgtcaccttccaggagcagggtgag
caggagtataagaactgtgagctggacaagaaccagcgccagtgcgtccagtatgcgcta
aaagctcggccgctgaggcgctacatcccgaagaacccttatcaatatcagatctggtat
gtggtaacgtcatcctactttgagtatctcatgttcgccttgatccttctgaataccatc
tgtcttggtatgcagcactatgggcaatctgatgagatcagctacctctctgacatgtta
aatgtggtcttcactgggctctttactctggaaatggttctcaaactgctcgcctttaaa
gtaaaaggttacttcagtgacccctggaacgtgtttgatttcctcattgtgattggcagc
atcattgatgtcgttctcagtgagattgatgattctgaggacacgtcccgcatttctatc
accttcttccgtctgttccgtgtgatgaggctggtgaaactgctgagccgaggggaagga
gttcggacccttctgtggacttttatcaagtccttccaggctctgccgtatgtagctctg
ctgattgtcatgctgttctttatttatgctgtcatcggcatgcaggtgtttggcaaagtt
gctatggtggatgggacccaaatcaaccggaacaacaatttccaaacgttccctcaggcc
gtgttgctgctgtttaggtgtgcaactggagaggcctggcaggagatcttactgggctgc
tcctatgggaagctctgtgaccccgaatcagactacaacccaggggaagagtacacctgc
ggatccagcttcgcctatttctacttcatcagcttctatatgctctgtgcattcctgata
attaacctgtttgtagctgtcatcatggacaactttgactacttgacccgggattggtct
attttgggtccccatcacctggatgagtttaaacgaatctgggcagagtatgacccagaa
gccaagggaagaattaaacacctggatgtggtgacactgttgagacgcattcagccacca
cttggattcggtaaattctgtccccaccgcgtggcctgtaagaggctggtaagcatgaac
atgcctttaaatagtgacggcacggtcaccttcaatgccaccctcttcgcccttgttaga
acagccctcaaagttaaaactgaaggtaattttgagcaatccaatgaagaactgagggcc
attattaagaagatttggaaaaggaccagtatgaaactacttgaccaggttattcctcca
attggagatgacgaggtgaccgtgggtaagttctatgccaccttcctcatccaggatcac
tttaggaagttcatgaagcgtcaggaggagtactatggttatcgaccaaagaagagtgct
gttgagatccaggctggtttgaggagcattgaagaggaagcagccccagagatccatcgt
accatttctggggacctaactgctgaggaggagctggagagagcaatggaggaggaaata
tacaggcggtcaggtggtttgtttggtaaccatgtcgaccatttccccatggagacgagc
agccccttgcagccccacgtgacaagccagcgccccctgcagttctccgaatccagagga
gaagatttggagtcccctgtattcttaccaaatgaggttgaattcttcccttcaggctcc
agtgctaacgtgaacaatgccaacaataatgccatagccaggatgtacttagaagatgag
ctaaacaaagaaattccgcaggcatgtgattccactgagagaggcttgtccatcaagaga
cgatcacgtcccctttccatgccagaaaggaaactctcatttcacttggaccacttgaag
aggcgactgacccaacagacagatgacacaacaatagaaatgacagagctacgtggcttt
gcacagcaggagccagaggtgattgttgacccgggaagcgaacaagacggtagagtgtca
cagagttcagatcccgagaggctccgtgccagcgggcagcaccagcagagggagacagtc
ttacgcacgccggccacagacaaactcatacagaaggttttggtttcaggaggtcttgga
tgcttagccagtgatccatccttggttgctgtgacaaagcaggaaatggccagtgcctgc
cacatggctatagatgacctggagagtgcagctgttgggctactacatgactggaagagc
caagctgggctttcccatcctccgcagcataccccctctgaaacatccttgtgcaatgtc
catgagcttgaagataccagctctgatggagaggtcacctcagtcagcacattgtag
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