Latimeria chalumnae (coelacanth): 102356720
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Entry
102356720 CDS
T02913
Symbol
ZC3H12A
Name
(RefSeq) zinc finger CCCH-type containing 12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102356720 (ZC3H12A)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102356720 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
RuvA_C
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
102356720
NCBI-ProteinID:
XP_005988845
Ensembl:
ENSLACG00000017365
LinkDB
All DBs
Position
Un
AA seq
724 aa
AA seq
DB search
MNIDRIQYEASTAVDFQSRGRKFSNAMLNSSQACPSLSWNMSSHEPFLNDNSFLSLNCIS
TQDRTQDGTDTSSKADQEQGAPHGGQGSWETVPMDQNEVHMKVDFFRKLGYSPEEVSAVV
QKLGSEADTNTLLGELVKLGTTTAEREAMPEDTPTPILVPRGGNSTNNQPASLPPEEKDD
GNNLRPVVIDGSNVAMSHGNKEVFSCRGIQLAVNWFLERGHTDITVFVPAWRKEQPRPDV
PITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIIVSNDTYRDLQN
ERPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVIPESKRQHCPYGKK
CTYGVKCKFYHPERINQPQRAVADELRANARLSPTKSMSPAFPLKEEKKLNLPKKQSHPD
LTSIAPSEPDMGSLKRMNLERRNSLHKGHTTENSVKVKGSNRPSKNAIYGPSEWYQHPSS
SNMDSIPFISQEHFDSGIGSLEQQMAEMWPSRPQNSNDHYLSEESGSSNCCSCSRQRHIY
KHSQSLDHERHHHFNSCSPKSVPSACSNSNFLPYHQEVPHARSSQGSNLVTPHGASRCFS
GYGAPVHPASVGQYSLSNDYSSASAHPREYWSEPYQLTPQGARNNSLPDPHRLHLVSQPP
YSDHCQWPQHDRYSEERANVRMKLCGIFHPHVVDTVMNHYPQLLDPQRLAAEILRYKSQN
PSMQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagacagaatacagtacgaagcaagcactgcagtggacttccaaagccggggc
agaaaattttccaatgcaatgctgaacagcagccaggcttgccctagcttaagctggaat
atgagctctcatgaaccttttttaaatgacaacagttttctcagccttaactgtatctca
acacaggacaggactcaggatgggacagacacaagcagcaaggcagaccaagagcaagga
gccccacatgggggccaggggtcctgggagacggtgccaatggaccaaaatgaagtgcac
atgaaagtggacttcttccgcaagttgggctattcccctgaagaggtctctgctgttgtc
caaaagcttggatctgaggctgacacaaacacattattaggcgagctggtaaaactagga
acaactactgcagagagagaggccatgcctgaagacaccccaacacccatcctagttccc
cgtgggggcaactccaccaacaaccaacctgcttctctgccacctgaagaaaaagatgat
ggcaacaacctgaggcctgttgtgattgacgggagtaacgtagctatgagccatgggaat
aaagaggtgttttcatgcagaggaattcaattggctgtaaactggttcctggagagaggc
cacacagatatcacagtcttcgtgccagcatggaggaaagagcagcccaggcctgacgtc
ccaatcacagaccaacatattcttcgggagcttgaaaagaaaaaaattttggttttcaca
ccttcacggcgggttggcgggaagagggttgtctgctacgatgatcgtttcattgtgaag
ttggctcatgaatctgatgggattattgtttccaatgacacgtaccgtgacttgcagaat
gaaaggcccgagtggaagaaatttattgaagaacgcctgctcatgtattcctttgttaat
gacaagtttatgcctcctgatgacccacttggacgacatgggcccagtttagataatttt
ctgaggaagaaaccagtcataccagagagcaagcgacagcattgtccatatggaaaaaaa
tgcacttatggggtgaaatgtaaattttaccatccagaaagaatcaaccaaccacagcgt
gctgtggcagatgaactccgagcaaatgccagactctcccctacgaaaagcatgagtcct
gcttttccactcaaagaagagaagaagctaaacttgccaaagaaacaatcccaccctgac
cttacttcgatagcaccatctgaacctgacatgggctcgctgaagaggatgaatttggaa
cgacgcaactcattgcataaagggcacacaactgaaaattcagtcaaggtaaaaggaagc
aacaggccttccaaaaatgccatttatggtccttctgaatggtaccagcatccatcttct
tccaacatggactcaattccttttatctctcaagagcactttgattcaggaattggttct
ctagagcaacaaatggctgaaatgtggccaagcagacctcaaaatagcaatgatcactac
ttgtctgaagaaagtggatccagtaattgctgtagttgcagtaggcaaaggcatatttac
aaacactctcaaagcttagatcatgagagacatcaccactttaacagttgctcccctaag
tctgtgccatcagcatgctccaatagcaacttccttccatatcatcaagaagtgccacat
gctaggtcttcccagggttctaacttggtgacccctcatggggcatcacgctgtttttca
gggtatggagcccctgtacacccagctagtgttggacagtacagtctttccaatgattac
tcttctgcctcagcacatcctcgggaatattggtctgaaccttaccaacttactcctcag
ggagctagaaacaacagtttgccagatccccataggttgcacttagtgtcccagccacca
tacagtgatcactgccagtggccacaacatgaccgatactcagaggagcgagcaaatgtg
cgcatgaaactatgtgggatcttccacccacatgtggtggacactgtcatgaatcattac
ccacagctactcgacccacaaaggcttgctgctgaaattttaagatacaaatcacaaaat
ccaagcatgcaataa
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