Latimeria chalumnae (coelacanth): 102356727
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Entry
102356727 CDS
T02913
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04510
Focal adhesion
lcm04520
Adherens junction
lcm04810
Regulation of actin cytoskeleton
lcm04820
Cytoskeleton in muscle cells
lcm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102356727 (VCL)
04520 Adherens junction
102356727 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102356727 (VCL)
04810 Regulation of actin cytoskeleton
102356727 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102356727 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcm04812
]
102356727 (VCL)
04147 Exosome [BR:
lcm04147
]
102356727 (VCL)
Cytoskeleton proteins [BR:
lcm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102356727 (VCL)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102356727 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Motif
Other DBs
NCBI-GeneID:
102356727
NCBI-ProteinID:
XP_006012034
Ensembl:
ENSLACG00000000259
LinkDB
All DBs
Position
Un
AA seq
853 aa
AA seq
DB search
MPVFHTKTIESILEPVALQISQLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTDDQMMKRDMPPAFIKVENACTKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDDRQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTAKSQGMEEAPKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWTNKDTEAMKRALALIDSKMNQAKGWLRDPSGQPGDVGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSDLRARGQGATPIAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGPPEGEEQVRGILAEAMKIAE
LCEDPKEREDIVRSLGEISALTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNRA
VANSRPAKAAVNLEGKIEQAQRWIDNPMIDDRGVGQTAIRGLVAEGRRLANAMMGPYRQD
LLAKCDRVDQLAAQLAELAARGEAETPQARAIAVQLQDALKDLKGKMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREELFEERAINFETHAAKLGATAEKAAAVGTANKATVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWMDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDIDKCKVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
ESVKAASDELSKTVSPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLDQLH
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgaagacgatagaaagtatcttggagccggtggctctgcagatt
tcccagctggtgataatgcatgaggaaggggaggtggacggcaaagccatcccagaccta
accgcacctgtggcagccgtgcaggcggctgtcagtaacctcgtcagggtgggaaaggac
acagtccagacgactgatgaccaaatgatgaagagggacatgccaccagcattcattaag
gttgagaatgcttgcactaaactggtccaggctgcccagatgttgaaagcagatccatac
tccgttcctgctcgggattacctcatcgatggatcaagaggaatcctgtctggaacttct
gacctgttgcttacttttgatgaggctgaggttcgcaaaattattcgtgtctgcaagggc
attttggaataccttactgtggcagaagtggtggaaaccatggaagatcttgtgacttac
actaagaacctgggaccaggaatgacaaaaatggcaaaaatgattgatgaccgacagcag
gagctgacccatcaggaacacagagtgatgctagtgaactccatgaacactgtgaaagag
ctattgccggttcttatttcaggtataaagatttttgtgactaccaaaactgccaaaagc
cagggaatggaagaagcgccgaagaaccgaaacttcactgtagagaagatgagtgcggag
atcaatgaaatcattcgtgttttacagcttacatcgtgggatgaggacgcttggactaac
aaggacacagaggccatgaagagagcactagctctaattgactccaagatgaatcaagcg
aaaggatggctccgagaccccagtggccaaccaggtgatgttggtgaacaagcaatcaga
cagatcctggatgaagcagggaaagttggagagctttgtgccggaaaagaacgaagagac
atccttggaactgctaagaccttggggcagatgactgatcaagtgtcagatctccgagcc
aggggtcagggtgccacacctattgcaatgcagaaggcccagcaggtgtctcaaggtttg
gacctgctgacagccaaggtggagaacgcagcccgtaaactggaagccatgaccaattcc
aaacaagccattgcaaagaaaatcgatgctgctcagaattggctggcagatcctaacggg
cctccagagggtgaagaacaggtccgtggaattttggcagaagctatgaaaattgcagaa
ctgtgcgaggatcccaaagaaagagaagacattgtccgttcccttggagaaatctctgct
ctcacagccaaactctctgacttgcggagacagggtaaaggagacactccagaggctcgt
gctttggccaagcagattgccactgcacttcaaaacttacagtccaagacgaaccgagct
gtagccaatagtaggcccgccaaggcagctgtcaacttggagggcaagatcgagcaagcc
cagcgctggattgacaacccaatgattgatgatcgtggcgtggggcaaactgcgatccgt
ggactggtggcagaaggccggcgcctggcaaacgccatgatgggaccctatcggcaggac
ctgcttgctaagtgtgaccgggtggaccagttggctgctcagttggctgaattggcagct
cgaggagaggcagaaacgccccaggccagagccatagcagttcagcttcaagatgcgctg
aaggatttgaaaggtaaaatgcaggaggccatgactcaggaagtgtccgatgttttcagt
gacaccaccactccaattaaactgttggctgtggcagccacggcacccccagatgcacct
aacagagaagagctgtttgaagaaagagcgatcaactttgagacccacgctgccaagctt
ggagcaactgctgagaaggccgctgctgttggaactgctaacaaagccactgtggagggg
atccaggcaactgtaaagtcggccagagagctaaccccacaggtggtatcagctgctcgt
atcttactgagaaaccctgggaaccaggctgcctatgaacattttgagactatgaagaat
cagtggatggataatgtggagaaaatgacaggattggtggatgaagctattgataccaaa
tctctgttggatgcctcagaagaagccattaagaaagacatagacaagtgcaaggtagcc
atggccaacgtccaacctcagatgcttgttgcgggtgcaaccagcattgcccgccgtgcc
aaccgaattctgttggttgcaaagcgggaagtggagaactctgaagaccctaagttccgt
gaatctgtcaaagctgcttctgatgagctgagcaaaacagtttctccgatggtgatggat
gctaaagctgtggcaggaaacatatctgatccaggtctgcagaagagtttcttggattct
ggatacaggatcctaggagctgtagctaaagtgagggaagccttccagccacaagagcct
gactttccaccaccacctcctgatcttgatcagttacat
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