Latimeria chalumnae (coelacanth): 102356805
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Entry
102356805 CDS
T02913
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03030
DNA replication
lcm03420
Nucleotide excision repair
lcm03430
Mismatch repair
lcm03440
Homologous recombination
lcm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102356805
03420 Nucleotide excision repair
102356805
03430 Mismatch repair
102356805
03440 Homologous recombination
102356805
03460 Fanconi anemia pathway
102356805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102356805
03032 DNA replication proteins [BR:
lcm03032
]
102356805
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102356805
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102356805
DNA replication proteins [BR:
lcm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102356805
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102356805
MMR (mismatch excision repair)
102356805
DSBR (double strand breaks repair)
HR (homologous recombination)
102356805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
102356805
NCBI-ProteinID:
XP_006010868
Ensembl:
ENSLACG00000007210
LinkDB
All DBs
Position
Un
AA seq
611 aa
AA seq
DB search
MPVRLSEGAIGEILQGRNPENPIVQINNIRPISTGNGPPRYRLLVNDGLHTLSSFMLATQ
MNHMIDDQLLTANCIIKIKRYLVNSLKDRRQVIMIMDLEILQSGEQVNGKIGNPTPYNEG
QGQQLLPAPTASKPQQHAFGSSVAVSSLNGNPAKQFGKTGGMGGASPTPVGSQPKAVPIS
SLNPYQTRWTIRARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNEQVDKFFHL
IEVNKVYYFSKFNMKIANKQYTAVKNDYEMTFNGESMLIPCDDVDTLPMVQFEFVPIDTL
EALKKDTLVDIIGICRSYEDATKVTVRSNNREVSKRNLHLMDMSRKVVTVTLWGEDADLF
DGSGQPVVAVKGARLSDFGGRSLSVLASSTFVKNPDIPEAFKLRGWFDSEGRALEAVSIS
DMKSDLLLRDGATNWKTLLEIEAEAMDLAGKTEYYSCVGTVIFLRKETCLYRACISEGCN
KKVVDQQNGFYRCEKCDREFPNFKYRLVLSVNIADFGSHRWVTCFQDVAETLLGQNAAYI
GELKDTNEEAFEEVFQQACFCSYMFRIRVQMETYNDESRIKATVMNFKPVNHKEYSKKLI
MNIRNYAAQLN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcagactgagcgaaggagccattggagaaatcctgcagggaagaaacccggag
aatcccatcgtacagattaacaatatccgtccaatttccactggaaacggacctcctcga
tatcgtctccttgtgaatgatggactccacaccctttcctctttcatgttggcgacccaa
atgaatcacatgattgatgaccagcttctaactgcaaattgcatcatcaaaatcaagaga
tatcttgtcaactcgctgaaggatagaagacaagtgattatgattatggatttggaaatc
cttcaatcaggagaacaggtcaatggaaaaattggcaatcctacaccttacaatgaaggt
cagggacagcagctgctaccagctcctacagccagcaagccccagcagcatgcatttggc
tccagcgttgctgtttcatctctgaatggcaatcctgctaagcagtttggtaagactggt
ggaatgggaggtgcttccccaactcctgttggatcccagcccaaggcagtaccgataagc
agcctgaacccctaccagacaaggtggaccatacgagcccgtgttaccaacaagagtcaa
attcgaacttggagcaattcccgcggagaaggaaagctcttttctatagagctggtggat
gagagtggagagatccgagctactgctttcaacgaacaggtggacaagttctttcacctc
attgaagtcaacaaggtctactatttctctaagtttaatatgaaaatcgccaacaagcag
tacacagctgtgaagaatgattatgagatgacgttcaatggggagagcatgctgatccca
tgtgatgatgtggacaccctgcctatggtgcagtttgagtttgtacccatagatacctta
gaagccctgaaaaaggacacgctggttgacattattggaatttgcaggagctatgaagat
gctacgaaggtaacagtgagatccaacaaccgtgaagtatccaagaggaacctgcatctg
atggacatgagtaggaaggtggtcactgttacactgtggggcgaggatgcagatttgttt
gatggctcaggacaaccggtggtggcagttaaaggcgcaagactctctgattttggtgga
cgaagtctttctgttttggcatcaagtacctttgttaaaaacccagatattccagaggcc
ttcaaactccgcggatggtttgactcagaaggtcgtgcccttgaagcagtttccatctct
gacatgaagtcggatttgctgttgagagatggtgctacaaactggaaaaccctgttggaa
atcgaagcggaggccatggaccttgctgggaagacagaatattacagctgtgttggcaca
gtgatttttctgcggaaggaaacctgcttgtatcgggcctgcatctccgagggctgcaac
aagaaagtggtggatcagcagaatggtttctaccgctgtgagaagtgtgatcgcgagttc
cctaatttcaaatatcgcttagtcttgtcggtaaatattgcagattttggttcacacagg
tgggtgacttgtttccaagatgtggctgaaacactccttgggcaaaatgctgcttacatt
ggagagcttaaggacacgaatgaggaagcctttgaggaggtgtttcaacaggcctgcttc
tgctcctacatgtttaggatccgtgtccaaatggagacgtacaacgatgaatctcgtatc
aaagccacagttatgaatttcaagcctgtgaaccacaaagaatacagtaagaagttgatc
atgaacataagaaactacgcggctcagctaaactga
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integrated database retrieval system
