KEGG   Latimeria chalumnae (coelacanth): 102356937
Entry
102356937         CDS       T02913                                 
Symbol
THOC6
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102356937 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102356937 (THOC6)
   03041 Spliceosome [BR:lcm03041]
    102356937 (THOC6)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102356937 (THOC6)
Spliceosome [BR:lcm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102356937 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_IFT122_1st WD40_like WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EIPR1 WDR54 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 102356937
NCBI-ProteinID: XP_006000935
Ensembl: ENSLACG00000013237
UniProt: H3AZH3
LinkDB
Position
Un
AA seq 333 aa
MIAATEVDIQRSLELLHMTVFSQSVSPCGKYLAAGNSYGEIAVFSLAAALSAEAREESHK
PLVRFTAHDGPVYSLVSSDSQLISAGNGEVRAWNWSELVKKSCKEAWVRRPPSRINLEIP
EINSLLLNQKDNSVLMAGGDNNIHAMDLESGTFTHVFEGHMDYIHCLSLREQFRECLSGS
EDGTVRLWDLRTGGLVQSIEVHKYQECTRPQYGKWISCLTTDSDWMLCGGGPALTLWHLR
SVTPTTVFPLPGCQKQVMFYQELILSAGDSPMIHHSQISGDIKAQIPCTPPSIYSLSINE
QSQEHKVLTAAGSSSKIDVFTNFGYRAFSLTFS
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgatagctgccactgaagtggatattcagcgcagcctggagctgcttcacatgaccgtt
ttctcgcagagcgtgtctccgtgtggcaagtacctggccgccggcaacagctacggggag
atagctgtgttcagtttggcagcagctctgagtgcggaagctcgcgaggaaagtcacaaa
ccgctggtacgtttcacagctcacgatggtccagtttatagcctggtgtcatcggacagt
cagctgatcagcgccgggaacggtgaggtccgagcgtggaactggagtgagctggtgaag
aagagttgtaaggaagcttgggttcgacgcccaccttccaggataaatttggaaattcca
gagatcaacagtcttctcctcaaccaaaaggataactctgtgctgatggccggaggggat
aacaacatccatgcaatggacttggaatcgggaaccttcacgcacgtgtttgagggtcac
atggattacatccactgtttgtccctgagggagcagttccgagagtgtctgtccgggagc
gaggacgggacagtgcgcctttgggatctgcggactggcggtctggtgcagtccattgag
gtccacaagtaccaggaatgcacgagaccccagtatggaaaatggatcagctgcctaaca
acggattccgattggatgctctgcggtggtgggccagccctgaccctctggcatctgcga
tcagtgaccccgacgacagtgttccccctcccggggtgtcagaagcaggttatgttctac
caggagctgatcctgtctgctggggacagcccgatgatccatcactctcagatcagcgga
gacatcaaagcccagatcccatgtacaccgccatccatctactccctcagtatcaacgaa
cagtcccaggaacacaaggtactcacggctgcaggaagcagcagcaaaatcgacgttttc
acaaacttcggataccgagcgttttcactgacgttttcctaa

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