Latimeria chalumnae (coelacanth): 102357018
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Entry
102357018 CDS
T02913
Symbol
CAPRIN2
Name
(RefSeq) caprin family member 2
KO
K18744
caprin-2
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102357018 (CAPRIN2)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102357018 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
DUF3947
Motif
Other DBs
NCBI-GeneID:
102357018
NCBI-ProteinID:
XP_006002191
Ensembl:
ENSLACG00000006297
LinkDB
All DBs
Position
Un
AA seq
998 aa
AA seq
DB search
MVQLSPLQPLSPSGEPEEKMSMKKDDKAGREPGLFQAYENYIENGLICLKHKIRNMEKRK
LKLEDYRDRLKQGDALNPDQLEAVDKYDEVIHNLEFAKDLQKTFAGLSQDLLKVQKKTLR
REQMMRIEAEKKRFHTILQVQYVLRNLTQEHVQKDFRGGLNGAKYLTSKELDHLVKFSKL
SCYERDESMSLEDQMEQTSLYFWDLLEGSEKPVAGTTYKRLKDMLSNLLKCGYFESIPVP
HYEMQEEEVPEKKPVVMEPEKPRQLPKPRMMPKSEPIVEPVRSMDPFLQSDEIQPREFLN
KRYLPEGSFASSKSPPEIVSWDVEYVETKQEKPKLWEAQFTVKKPEEKPPQPPLPLQQQQ
LPQEQRPFLKQSRAAGFVAKEQPPDPKNCVVPEPREKRERRPKIEPEVKQVPKPVHQPEA
EFCSSSSLPKDPVLRRQKLQDLMAEIQGTCDFMQESVLESDRPSPSALPLSQRPSTPPPV
RSPPASKEQRKPSQPEILPQSTQVTSAVTLHSPKADLVAADHTLSGSESDSNSPCSPPQT
PVSLLPEAEPYIPPQQLYQASPRIPEQLPRKKSVDSTQAPISLPSDLPQVASPTTSMSPL
PQGQVFPSAQASTSSIAKNTTPFQAMQTVFNMSAPVPSRNDREMKEIPYSPSYSQSFSTA
STQTPPQCSLQTTQVVEQSVVVNETQQTVNPYQPEVIIPVTSGNLMFHPTGQQASTFPRG
NQGYFSSRGSIRGAARGGRSLINSYRPANGFKGGFDGYRGPSPIIFNGSYGQPPFPAREY
QGVPYPQRDVGYQQNYKRGGSSGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRS
ITPVDVPMTSQAATILPVHVYPLPQQMRVAFSAARTSNFTPGCLDQLIVFDLLLNNLGDS
FDFMLGRFICPVSGTYVFIFHMLKLAVNVPLYVNLMKNDEVLVSAYANDGAPDHETASNH
AVLQLLQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcgcctttgcagccgctgtctccttcaggcgagcccgaggagaagatg
agcatgaagaaggacgacaaagccggcagagagcctggccttttccaagcttatgaaaac
tacattgagaatggactcatctgcctaaaacacaaaatcaggaacatggaaaaaagaaag
ctgaaactagaagattatagagatcgtctgaagcagggagacgcgctcaatccagaccaa
ctggaggcagtggacaagtatgatgaagtcatacacaatctggagtttgcgaaagatctt
cagaaaacatttgctgggctcagccaagatcttttaaaagtacagaagaagactttgaga
cgagagcagatgatgagaattgaagctgagaagaagcgctttcacaccattttgcaagtg
caatacgttctacgcaatctgacccaggagcatgtgcagaaggacttcaggggaggccta
aatggtgccaaatacttgacttccaaagaactagaccaccttgttaagttctccaaactg
agttgctatgaaagggatgaaagcatgagccttgaagatcaaatggaacaaacatcactt
tacttttgggacctgttggaaggcagtgagaagccagtggctggaacaacctataagcgt
ctaaaggatatgttgagtaacttgttgaagtgtggctattttgagagtattcctgttcct
cactatgagatgcaggaagaggaggtgccagagaaaaagccagtggtaatggagcctgaa
aaaccaaggcagttaccaaagccaagaatgatgccaaagagtgaacctatagtggagcca
gtgaggtctatggacccatttttacagtctgatgaaattcagcccagagagttcctcaac
aagcgctacctgccggaagggagttttgcctctagcaagtctccaccagagattgtatcc
tgggatgtggagtatgtggaaaccaagcaagagaagcccaagttgtgggaagcccagttc
acagtgaagaagccagaagaaaagccaccacagccaccattacctctccagcagcagcag
ctgccgcaagagcagcgtccctttctcaagcaaagtagagctgccggatttgtggcaaaa
gaacaaccaccagaccccaagaactgtgtggtacctgaacccagagagaaacgggaacgg
agaccgaagattgaaccagaagtaaaacaagtgcctaagccagtgcaccagccagaagca
gagttctgctcgtcctcttccctgcctaaggaccccgtgctcaggagacagaaactgcag
gatctcatggcggagatacaagggacatgtgatttcatgcaagagtctgttttggaaagt
gatcgtccatcaccaagtgcccttcctttgtcacagcggccttccacccctcctcctgtg
aggagtcctccagcttctaaagaacaaaggaagccaagccaaccagaaattcttccacaa
tctacacaggttacatctgctgttacactgcatagtcctaaagctgacttggttgctgct
gaccatacactgtcaggatctgaatcggactctaattcaccatgctctcctccacagact
ccggtgtcccttctaccagaggcagagccctacattccacctcagcagttgtaccaggca
agtcctcgcatccctgagcaactccctcgcaaaaaaagtgtggactccacccaggcaccg
atctctctgccaagtgacctgccgcaggtagcctcccccaccacctccatgtctcccctg
ccccagggacaggtctttccttctgcgcaagcaagtaccagttctatagccaagaacacc
accccctttcaggccatgcagactgtttttaacatgagtgcccctgtgccttcacgtaat
gatcgggagatgaaagaaataccatattccccttcctatagccagagtttctccacagca
agtacccagactccaccccagtgttctctgcagaccacacaggttgtggagcagagtgtg
gtggtcaatgagacgcagcagacagtcaatccatatcagcctgaagtaattattcctgtg
actagtggtaacctgatgttccacccaacaggtcagcaagccagcaccttcccaagaggt
aaccagggctattttagtagtcgaggctcgatccgtggagctgcccgtggtgggagaagt
ctgattaactcctatcgcccagctaatggcttcaaagggggctttgatggttacagagga
ccatcgccaataatcttcaatgggagctatgggcagccaccttttcctgctcgagagtac
caaggagtgccatatccccagagggatgttggctatcaacagaactacaaacgtggagga
tcatctggaccgcgagcgaactccagagcagggtggagtgactcctcacaggtgagcagc
ccagaacgggacaacgagacgtttaacagtggggactctgggcagggggactcccgcagc
atcaccccggtggatgtgcctatgacaagccaagcggccacgatcctgccggtgcacgtc
taccctcttcctcagcagatgcgagtggccttctctgcagccaggacttccaacttcacc
ccagggtgcctagatcagcttattgtctttgacctgctgctcaacaatctgggcgactcc
tttgactttatgcttggccggttcatctgtccggtaagtggcacctacgtcttcatcttc
cacatgctgaagctggcggtcaatgtcccgctgtatgtcaacctaatgaagaacgatgag
gtgctggtgtctgcatatgccaatgatggtgcccccgaccacgaaaccgcaagcaaccat
gcagtcctgcagctcctgcaaggagaccagatttggcttcgactacaccggggtgccatt
tatggcagcagctggaaatattccactttttcaggctaccttctctatcaggactga
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