Latimeria chalumnae (coelacanth): 102357042
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Entry
102357042 CDS
T02913
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102357042 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102357042 (IRF6)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102357042 (IRF6)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102357042 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102357042
NCBI-ProteinID:
XP_014347913
Ensembl:
ENSLACG00000018600
UniProt:
H3BH00
LinkDB
All DBs
Position
Un
AA seq
446 aa
AA seq
DB search
MAVHPRRVRLKPWLVAQVDTGKYPGLMWLNREAKRFQIPWKHATRHSPQLEDENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFKLMYDGTKEVPMNPVKIYEVCDIPQAN
GLISNPGSTGSVPWEDNDIEIEDEEDGDLNSSQPHSQLQESFPYLTIHDSPMAPASVASC
SPVEVWPKTESVDAVDMEIPQTQFPSPEIWISSLPMTDLDIHFHYRGKEVGQTTTVSNPQ
GCRLFYGDLGPMPDQEELFGPINLEQVKFPGTDAIHNEKQRLFTNRLLDVMDRGLILEVN
GHAIYGIRLCQCKVYWSGPCAPSTTPNLIERQKKVKLFCLETFLSELVAHQKGQASRQPG
YEIYLCFGEEWPDGKPKERKLIMVQIIPVVARMLYELFSAEGARSFDSGSVRLQISTPDI
KDNIVAHLKQLYRLLQTQQGQDTWPV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcacccacgtcgtgtccgcttaaagccctggctagttgctcaagtggacact
ggcaagtaccctggtctcatgtggttaaacagggaagccaaacgatttcaaatcccctgg
aaacatgctaccagacatagccctcagcttgaagacgagaacaccatatttaaggcatgg
gcagtggaaacaggaaagtatcaggaaggtgttgatgaaccagacccagccaaatggaaa
gcacagctgcgttgtgcgctcaataaaagtcgtgaatttaaattaatgtatgatggaaca
aaagaagtacccatgaatcctgttaaaatctatgaagtctgtgatatcccacaagccaat
ggactaataagtaacccaggttcaacaggttctgttccctgggaggacaatgacattgag
atagaagatgaagaagatggtgacttaaactcttcacagcctcatagtcagcttcaggag
tcttttccatatctaactatccatgactctccaatggctccagccagtgtagctagttgt
tctcctgtggaagtgtggccaaagactgagtcagtagatgcagtggacatggagattcca
caaacgcaatttccatctccagaaatttggatcagttctcttcccatgacagatctagat
attcacttccattatcgtggaaaagaagttgggcaaactacaactgtcagtaacccccaa
ggctgcaggttattctatggtgaccttgggccaatgccagaccaggaagagctttttggc
ccaatcaatttagagcaggtaaaattccctgggacagacgctatccacaatgaaaagcag
cgactcttcacaaaccggctactggatgtcatggaccgtggacttattctggaagtcaat
ggccatgcaatatatggcatccggctgtgccagtgcaaggtgtattggtctggaccctgt
gcacccagtaccacacctaacttgattgagaggcaaaagaaagtgaaactcttctgttta
gaaacatttctaagtgagttggttgcccaccagaaaggacaggcaagcagacagcccggc
tatgaaatatacctttgttttggggaagaatggcctgacggcaagcccaaggaaagaaag
ctgattatggttcagattatcccagttgttgctcggatgttgtatgaattgttttctgca
gaaggcgctcgctcatttgacagtggcagtgtgcggttacaaatttccacccctgatatt
aaggacaatattgttgctcacctaaagcaactataccgcctactacagacccaacagggg
caagatacctggcctgtatag
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