Latimeria chalumnae (coelacanth): 102357067
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Entry
102357067 CDS
T02913
Symbol
GABRA4
Name
(RefSeq) gamma-aminobutyric acid type A receptor alpha4 subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102357067 (GABRA4)
04082 Neuroactive ligand signaling
102357067 (GABRA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102357067 (GABRA4)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
GABA-A
102357067 (GABRA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102357067
NCBI-ProteinID:
XP_014354055
Ensembl:
ENSLACG00000002509
LinkDB
All DBs
Position
Un
AA seq
563 aa
AA seq
DB search
MVSAKKETLIAMSSSCVSTLIYCLCVTACIAQPSGEIRKDEKLYPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWEDKRLKYDGPIEILRLN
NLMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTIRAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLVGQTVSSETVTSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNSQIEKAKKKTAKLPA
GPSPTPTKKANEREEALQVNPDSNSNLRKRINMPQMEPRIAAGHRTSSGNNSSGAIRPSI
VGQVPAALGPAHVPISSPNPFSRINVPLPETPFSSKSTPPAPPSTPTLTGQIPTHTTTGP
ASMQHLLGSKLEHIQAAANTFGPSAKNLSPTPAPPAPSPSGSGTSKIDKYARILFPVTFG
AFNMVYWVVYLSKDTMEKTESQM
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagacactgatcgcgatgtcctccagttgcgtttccacttta
atttactgtctctgcgtgacagcttgtattgcacaaccttcgggggagatcagaaaggat
gagaaattatatccagaaaattttacacgtatcctggacagtcttttggatggttatgac
aacaggctgcgaccgggattcgggggtcccgttactgaagtcaaaacggatatatatgtg
acaagctttggaccagtgtctgatgtggagatggaatataccatggatgtcttctttcgt
cagacctgggaagataaaaggctaaagtatgatggtccaatcgaaatcctaaggcttaat
aacctcatggtcaccaaagtgtggacacctgatacttttttcaggaatggaaaaaaatct
gtctcacataatatgacagctccaaacaagctgtttagaataatgagaaatggtaccatt
ctatacacaatgaggctcaccatacgtgcagaatgcccaatgcgactagtggattttcca
atggatggtcatgcctgccctcttaaattcggaagttatgcttatccaaaaagtgagatg
atttacacatggacaaaaggaccagaaaagtcagtagaagtcccaaaagagtcttctagt
ttggttcagtatgatctggttggacaaacagtatctagtgaaactgttacatccattact
ggtgaatatattgtaatgacagtttactttcatttaagaaggaaaatgggctactttatg
attcagacatacattccttgcattatgacagtgattctctctcaagtatctttttggatt
aataaagaatctgttccagctagaacagtatttggtataacaactgttctgactatgaca
acactcagcatcagtgcacggcattccttgccaaaggtttcatatgctactgccatggac
tggttcatagctgtctgcttcgcctttgtattctctgctcttattgagtttgctgctgtt
aactactttactaacagccaaatagagaaagccaaaaagaagacagcaaagcttccagct
ggaccttcacccacaccaacaaagaaggctaatgagagggaggaagcacttcaggtaaat
ccagatagcaattccaacttaagaaaaagaataaacatgccacagatggaacctaggatt
gctgcaggccatcgaacttcatcaggaaataatagtagtggagctattcgaccttccatt
gttggtcaggtgcctgctgcacttggcccagcacatgttcctatatcaagcccaaatcca
ttcagtcgtatcaatgtacctttgccagaaactcccttttcttcaaaaagtacacctcct
gctcctccttccactcccacgttaactggtcaaatacctacccatactaccactggccca
gcatccatgcagcacttgcttggatcaaaacttgagcacattcaagctgcagctaatact
tttggaccatctgcaaagaatttgtcacccactcctgctcctcctgcgccctcaccttct
ggttctgggaccagtaagatcgacaaatatgcacgcattctttttccagtgacttttggg
gcattcaacatggtctactgggtggtctacctttcaaaggataccatggagaaaacagaa
agtcaaatgtag
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