Latimeria chalumnae (coelacanth): 102357293
Help
Entry
102357293 CDS
T02913
Symbol
VPS50, CCDC132
Name
(RefSeq) VPS50, EARP/GARPII complex subunit
KO
K23288
syndetin
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102357293 (VPS50)
Membrane trafficking [BR:
lcm04131
]
Protein recycling
Others
EARP complex
102357293 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SUV2_N
Motif
Other DBs
NCBI-GeneID:
102357293
NCBI-ProteinID:
XP_006007154
Ensembl:
ENSLACG00000001900
UniProt:
H2ZXK3
LinkDB
All DBs
Position
Un
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGPKSPPENVHDLSPTENFRIPNKEEQRELREQPTDPQKEQEIINSIEEV
YFSSDSFDIVKYELEQLPPVLNIQELEDYRNNLQQQQAAVSKKVADLILEKQPAYVKELD
RVTSLQTSLQLAAVICTNGRRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVTHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITPDSYIPCLSDLCKALWEVMLSYNRTMGWHEEHDNEDTTPATDG
TNVMGAGESNFDRSYVKKKLEHGLTRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSI
LQLHEFKFMGQPRSPSVSPSKQHGTTPLASVPLFEQYCNGGNPFEMQAESKDDETEDVLA
ANGYESDELEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSLKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAIYTFFGRNDFH
ESTGLGLISSRLRTTLNRIQENLIDLEIPSEVSGNLSAAEERKEKVPSPHLSQLVVLTCS
ESLYGLAERVVATESLVFLAEQFEYLQPHLDAMMPAVKKPFLQQFYSQTVSTAGELRKPI
YWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNVLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPDK
EFVETYIKAYYLTENDMERWIKDHKEYSTKQLTNLVNVCLGSYINKKTRQKLLAAIDDLD
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaagtcacttatgacccgacagggtccaaagagtcctccagaaaatgtt
catgaccttagcccaactgagaattttcggatccccaacaaggaggagcaaagagaactg
cgagagcagcccactgacccacagaaagagcaagaaataataaacagtatcgaagaagtg
tatttctccagtgactcgtttgacattgtgaaatatgagttggagcaactcccccctgtt
cttaacattcaagaactagaagactacagaaacaacttacaacaacaacaggcagctgtt
tctaagaaagtggctgaccttattctagagaagcagcctgcttatgttaaggaacttgac
cgagttacttcgttgcagactagcctgcagttagctgctgtcatatgtacaaatggaaga
agacaattaaatatagcaaaggaaggttttacacaagctagcttgggcctacttgcgaat
cagaggaagagacaattgctgattggactgctgaaatcattgaggacaataaaaacactg
caaaggactgatgtacgactgagtgaaatgttggaggaggaagattatcctggagcaatt
caactgtgtttggaatgccagaaggcagctagtacatttaaacactacagctgtataagt
gaactaaattcaaaactacaggacactttagaacaaatagaggagcaactagatgtagcc
ctgtctaaaacgtgcaaacactttgatgtcactcactatactaaagttcaacaagcctac
aggctattaggaaaaacacaaactgcaatggaccagctacacatgcacttcactcaggct
attcataatacagtgtttcaggtggtactagggtatgtggagctgtgtgcaggaaataca
gacacgaagtttcagaaactacaatataaagacctctgtacgcatattactccagacagc
tacattccatgcctctctgatctctgcaaagccctctgggaagtcatgctaagctacaat
cgaactatgggttggcatgaagagcatgacaatgaagacacaactcctgctacagatggc
accaatgtgatgggtgctggcgagtcaaactttgatcgtagttatgtgaaaaagaagtta
gaacatgggcttactcgcatctggcaggatgttcagttaaaagtcaaaacgtatctgctt
ggcactgacatgtccaacttcaaatatgatgatttcatttttgtactggatatcatcagc
aggcttatgcaagttggagaggaattctgtggcagtaagtcagaggttttgcaagaatcg
attagaaaacagagtgtaaattatttcaagaactatcacagaacacgtcttgaagagttg
cgcatgttcttagagaatgagacctgggaactgtgccctgtaaagtcaaattttagtatt
ttgcaacttcatgagttcaagtttatgggtcaaccgcgttccccttcagtatcacctagc
aagcagcatggaactacacccttagcatccgtacctttgtttgaacaatattgtaatggc
ggtaatccatttgagatgcaagcagagagtaaagatgatgaaacagaagatgtgctggct
gctaatgggtatgagtctgatgaattagagaagagtgcttatcaggagtatgacagcgac
agtgatgttcctgaagagctcaagagagattatgtggatgagcagactggggatgctccc
gtgaaaagcatttcccgagaaactttgagaagcctgaagaagtcagattacagtctgaac
aaggtgaatgcaccgatcttgacaaacactacactgaatgtaataaggcttgtaggaaaa
tacatgcagatgatgaatatcttgaagccaatagcatttgatgtcatccattgcatgtct
cagctatttgactactacttgtatgcaatctacacattctttggccggaatgattttcat
gaatcaacgggactgggcctaatcagcagcaggctgcgaacaaccttgaacagaatacag
gagaatctgattgacctggagattccttcagaagtctctggtaacctgtcagctgctgaa
gagagaaaggagaaggttccaagtccgcatttgagccagttagtggttttgacctgtagt
gaatctctatatggccttgcagaaagggtagtagctacagaatctctggtatttctggct
gaacagtttgaatatcttcagcctcatcttgatgctatgatgcctgcagtcaagaaaccc
ttcctccagcagttctactctcagactgtgtctactgctggcgaactacgtaaaccaatc
tattggatcgtggctgccaaagcaattgattatgaacagatgctactccttatggctaat
gtgaaatgggacgtgaaagaaattatgtcgcaacacaacgtatatgtcgatgcccttcta
aaggagtttgagcagtttaataagaggctgaatgaagtctccaaacgtgtccgcattccc
ttgccagtgtctaatgtcctctgggagcactgcatccgcttggccaatcgaaccatcgta
gaaggttatgctaatgttaagaagtgtagcaatgaaggccgtgctttgatgcagctggat
tttcagcagtttttaatgaaactggagaaactgacggatctaaggcccatccctgataaa
gagtttgtggagacgtacatcaaagcttattaccttactgagaatgatatggaaaggtgg
atcaaggatcacaaggaatactccacaaaacagctgaccaacttggtgaatgtttgcctg
ggatcctacataaacaagaagacaagacagaaactgttagccgctattgatgaccttgac
agacctaaaagatag
DBGET
integrated database retrieval system
