Latimeria chalumnae (coelacanth): 102357340
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Entry
102357340 CDS
T02913
Symbol
UBTF
Name
(RefSeq) upstream binding transcription factor, RNA polymerase I
KO
K09273
upstream-binding transcription factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102357340 (UBTF)
03021 Transcription machinery [BR:
lcm03021
]
102357340 (UBTF)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
102357340 (UBTF)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
102357340 (UBTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
102357340
NCBI-ProteinID:
XP_005992274
Ensembl:
ENSLACG00000016842
LinkDB
All DBs
Position
Un
AA seq
730 aa
AA seq
DB search
MNGEPEEATDIEMASSKEQDHWSKEDMLNLLECIRVNIPTNDNCKFKTTESHLDWHKVAF
KEYTGDMCRQKWLEISHEIRKFRTLTELILDAQEHVKNPYKGKNLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQEFQREKIAFEQNMARFR
EEHPDLVDSSKQVDHPEKPKTPQQLWFNHERKVLLKLRPSATSKDIKEALSKQWSQLSDK
KRLKWINKALEQQKQYEEIMRDYTKHHPELNISEEEITKSTLNKAERQLKDKFDGRPTKP
PPNSYSLYCAELMSNMKDVRSTERMALCSKQWKMLSQKEKDAYQKLCEQKKKDYEIELHR
FLVSLPQEEQRRVMAEEKMLGLNRKSATKSSSKKAKGGSEKPKRPISAMFIFAEERRKKL
QEERPELSESELTRFLARMWNDLSDKKKAKYKAMEAAMKAESEKQMDDRVKLPESPKNAE
EIWQQSVIGDYLARFKNDRTKALKTMEATWNTMEKKEKLMWIKKAAEDQKRYERELSEMR
SSTSSVNPKKVKFEGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRLTQH
QKDQYKKLAEELQKQYKVKLENWLKSLTLQERQTYKEHTSNKRKSTGKAGVLNAKVKPGI
QPKSESEEEEEEEDEEEEEKDDSSEEGGDSSGSGSEEESGDENEDDDDNESESSSSSSSS
SEDSSDSESD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaaccagaagaggctacagatattgaaatggcttcttcgaaggaacaagac
cattggtccaaggaggatatgctgaatcttctggagtgcattagagttaacattcctact
aacgacaactgcaagtttaaaacgacagagtcacacttggactggcacaaggtagccttt
aaagagtatactggggacatgtgtaggcagaagtggcttgaaatctcacatgagataagg
aagttccgtacattaacggaactgattctggatgcccaagaacatgtgaagaatccatac
aagggcaaaaacctcaagaaacatccggattttccgaagaaacctttaactccatacttc
cgtttctttatggaaaagagagcaaagtatgccaagctgcatcccgagatgagtaatcta
gacctgaccaaaattctctccaagaagtataaggagcttcccgagaagaaaaagatgaaa
tacatccaagagtttcagagagagaagatagcgtttgagcaaaatatggccagattcaga
gaggagcacccagatctggttgatagttcaaaacaggtggaccatccagagaaacctaaa
actccccagcagctttggtttaatcacgagaggaaagtcctcctaaaactacggccaagt
gcaacatcaaaggatatcaaagaggcactgagcaagcagtggtcccaactgtctgacaag
aagagattgaagtggattaacaaagctttggagcagcagaaacaatatgaggagataatg
agagactatacgaagcatcatcccgaactaaacatcagcgaagaagaaatcacaaaatct
actctgaacaaggcggaaagacagctgaaggataaattcgatggccgaccaaccaaacct
ccacctaacagttattccctatattgcgctgagctgatgtccaacatgaaggatgttcgc
agcacagaaagaatggctctgtgcagtaagcagtggaagatgttatcccagaaagagaag
gatgcttatcaaaagctttgcgagcaaaaaaagaaggattatgaaatagaattgcatcgc
ttcttggtgagcttgcctcaagaggagcagcggagagtcatggctgaagaaaaaatgctg
ggcctaaacagaaaatctgccaccaaatcttcatctaaaaaagccaagggagggtcagaa
aaacccaaacgacccatatctgccatgtttatctttgctgaagagaggcggaagaaactc
caggaagaaaggcctgagttgtcagagagtgagctgacccgattccttgccaggatgtgg
aatgatctctctgacaagaaaaaggcaaagtacaaggcaatggaggcagcaatgaaagct
gagtcggagaagcagatggatgacagggtgaaattgccggagtcgccaaaaaatgctgaa
gagatttggcagcaaagcgtcattggggattatcttgccaggttcaaaaacgaccgcaca
aaggcattgaagaccatggaagccacctggaatacgatggaaaagaaggaaaaactgatg
tggatcaagaaggcagctgaagatcagaaacgatatgaaagagagttgagtgaaatgagg
tcatcaacttcatcggtaaatcctaagaaagttaaatttgagggcgaacccaaaaaacca
ccaatgaatggttatcagaagttttcccaggagctgctgtccaatggggagttgaatcac
ctcccgctaaaggagagaatggtggaaatcgggagccggtggcagagactaacccagcat
cagaaagatcagtacaagaaactagcagaggagctgcagaaacaatacaaggttaaacta
gagaactggctgaagagtttgactttacaagaaagacaaacctataaggagcacacgtca
aataaacgcaaaagtactggcaaggctggggttctgaatgctaaagtgaagccagggata
caacccaaatctgaatcggaagaggaggaggaggaggaagatgaggaggaagaagagaaa
gatgattcttcagaagaagggggggactcctctggatctggcagtgaggaggagagtgga
gatgagaatgaagacgatgacgacaatgaatctgagagcagcagcagttcatcctcttcc
tcagaagattcttcagactctgagtcagactga
DBGET
integrated database retrieval system
