KEGG   Latimeria chalumnae (coelacanth): 102357354
Entry
102357354         CDS       T02913                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm00310  Lysine degradation
lcm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102357354 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102357354 (PLOD1)
Enzymes [BR:lcm01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     102357354 (PLOD1)
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102357354 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 DUF6492
Other DBs
NCBI-GeneID: 102357354
NCBI-ProteinID: XP_005996627
Ensembl: ENSLACG00000005666
UniProt: H3A9R3
LinkDB
Position
Un
AA seq 775 aa
MGQSSLLFKNPKSAEKLLLRKSLHLPEDWSQDCSIREISDINRYIPTMLFLPAILLFFLS
GVSSASSKTLGKENLLVLTVATKETDGFQRFMRSAKFFNYSIQVLGKGEDWQYGHGMNAF
GGGQKIRLLKSALEEYADKEDSVILFTESYDVIFASSPMELLKKFQQTRSRVVFSAETLI
YPERRLEVKYPPVLDGKRFLSSGGFIGFAPNLNKLVSEWEGKDDDSDQLFYTKIFLDPEK
REKINITLDHKCRIFQNLNGALDEVVLKFEDGRVRARNVAYNTLPVIVHGNGPTKLHLNY
LGNYIPRIWTFETGCTICDENLVKLSELKDSDFPLVMVGVFIEQPTPFISEFFKRLHALQ
YPKGRLQLFIHNSESHHEPHVQKFLTEHGTEYQGVKLVGPDEGILGADARNMGIDLCRED
IECRYFFTVDAEVVITNSLTLQILIEQNKSVIAPLVSRPGKLWSNFWGALSADGYYARSE
DYVDIVQGRRAGIWNVPYISSIHLVKADALRMELAQKDLFHSSRLDADMAFCQNARNQGV
FMFITNRHEFGRTVSIATYKTTQLHNDLWQIFENPLDWKEKYIHKNYSKSLEKNLIEMPC
PDVYWFPLFTDTACDELVEEMEHYGEWSGGKNRDYRIQGGYENVPTIDIHMNQIGFQREW
HKFLLDYAAPITELMYPGYYTQAQFDLAFVVRYKPDEQPFLRPHHDASTFTINIALNSVG
KDYEGGGCRFLRYNCSIGAPRKGWALLHPGRLTHYHEGLPTTKGTRYIVVSFVDP
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgggtcagtccagcctcctttttaagaatcccaaatctgccgagaagctgcttttacgc
aaatcactgcatttaccagaggattggagtcaagattgcagtattcgggagatcagcgat
attaatcgatatattccgaccatgctctttctgcctgcgattctcctcttctttctctcg
ggagttagtagtgcttctagcaaaaccctcggaaaagagaatctgctggttttaactgtt
gccacaaaagaaactgatggcttccaacgatttatgagatctgccaagttcttcaactac
agcatccaggtgctgggaaagggagaagactggcagtatggacatggcatgaatgctttt
ggtgggggccagaagattcggctcttgaaatctgctctagaagaatatgcagataaagag
gactcggtcattctgtttactgaaagttacgatgtgatctttgcatccagtcccatggag
ctactgaagaaatttcagcaaaccaggagcagggtggtgttttctgccgagacactgatt
taccccgagcgtcggctggaggttaaatacccccctgtgctggatggcaagcgctttctc
agctctggagggttcattggctttgctcccaacctgaacaagctggtatcagagtgggag
gggaaggatgacgacagcgaccagctcttttatacaaagatattcctggatcccgagaaa
agggagaagatcaacatcactttggatcacaaatgcagaattttccaaaacctaaatgga
gctttagatgaagtagttttgaaatttgaggatggtcgtgtgagagcacgaaacgtggct
tataatactctgccagtcatagtccatggcaatgggcccacgaagcttcatctgaactac
cttggtaactacataccccgcatctggacctttgagactggctgcaccatctgtgatgag
aacctggtgaagctctcggagctgaaggatagtgacttcccactggttatggttggagtt
tttattgaacagcccaccccctttatctctgagttcttcaagcgacttcatgctcttcag
tacccaaaggggagactgcagctcttcattcacaacagtgaatctcaccatgagcctcat
gtacagaagttcctcacggagcatggtactgagtaccaaggggtgaagctggttggtcca
gatgaagggattctaggtgctgatgcacgcaacatggggatagatctgtgccgtgaggac
atagaatgccggtactttttcactgtggatgctgaggtggtgatcaccaactctctcact
ttgcagatcctcattgagcaaaacaagtctgtaattgcccctctggtgagtcgccctggg
aagctatggtcgaatttctggggtgcactgagtgctgatgggtattatgctcgttccgag
gattacgtggatattgttcaaggaaggagagctggaatttggaatgttccctacatctcc
agtatccacctggttaaggctgatgctctgcggatggaactcgctcagaaggatctgttt
cacagcagcaggctggatgctgacatggccttctgtcaaaatgcacgaaatcagggagta
ttcatgttcatcacaaacagacatgagtttggacgcactgtctccatagcaacctacaag
acgacccagctccataatgacctgtggcagatcttcgagaacccactggactggaaggag
aaatatatccacaaaaattactcaaaaagccttgaaaagaacttgatagagatgccctgc
cccgatgtgtactggttccccctgttcactgacactgcctgtgatgaactggtggaagag
atggaacactatggcgaatggtctggtggcaaaaatcgggactacagaatccagggtggc
tatgagaatgttccaacaattgacatccacatgaaccagattgggtttcagagagagtgg
cacaaattcctcttggattatgcagcaccgattacggagttaatgtacccaggttactac
acccaggcacagtttgatttggcctttgtggtgagatataaacccgatgagcagcccttc
ctacgacctcaccatgacgcatccaccttcaccatcaacattgccctgaatagtgttggc
aaagattatgagggaggaggctgtcgatttctccggtataactgcagcattggagcacca
cgcaagggctgggcactgctccacccaggacggctgacacattaccatgaggggcttcct
accaccaaggggacaagatacattgttgtttcatttgttgatccataa

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