Latimeria chalumnae (coelacanth): 102357520
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Entry
102357520 CDS
T02913
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lcm
Latimeria chalumnae (coelacanth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102357520
NCBI-ProteinID:
XP_005996274
LinkDB
All DBs
Position
Un
AA seq
1154 aa
AA seq
DB search
MQVNNDNVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLDPEDTARKKAPPPPKRAPTTAL
TLRSKSMTSELEELVDKASMRKKRDKVDEIMSASKPPRAGDNIGMDSRVATIKQRPTSRC
FPLAIEMNSMYDRQGIAVMPPTVPGSPRSPYLGLPRGTMRRQKSIGMRIFIGITEEEKQF
LAPPMLKFTRSLSMPDSSEDIPPPPSTSAPSPPYNSPKSPTTRSYGTIRPGFNQNSGTKS
PTSNRPDSMGTIRRDKGTYYRQESDQYSVDSEDPYKQNSSSQQQNFKRNQMPENPYSEVG
KIANKAVYVPAKPARRKGTLVKQSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSM
EIETQCSEHAGQLRPEDSLSVNNPFAAAIAGAVKDREKRLEARRNCPAFLSTDMGDEDIG
LTPGPRLRHSKSIDEGMFSNEEHFGHLRVQPPLTTSRGSTSTFNSTDSNSQNELNSTRTF
NTTTKEDDSDSNPGTTKSYCTTTTNNYVHPVTGKLLDPNSPLALALAARDRAMKEQIQQS
AGKGEAGKADLNKPLYIDTKVKSNIETTFPVTSTINRQTQRAPLRRQETEAKYETEVVKE
DKKAEEKKNMLISIVDTSQQKTAGLLMVHTMDGTKTDDNAICDSEKEERKIALENSSTEL
LGSNQAVEDASKMSTTSDLPASPAKAIITVSSVDEPVILPFRIPPPPLASVDIDEEFIFT
EPLPPPLEFANSFESPEDPPAIPTLSDFIKQRKNGTSTSPSYNPNLSTNALDSKKQVGLS
NCLPAAFVPPPENFDSVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENLDT
CTVYADGQAFLVDKPPVPPKPKMKLIINKSNALYKDALIEENTDNFVVPPPAPPPPPAGA
QANAPVQQRTSKLWGDAPELKSIIPPDPKANVISELNSILQQMNRDRSSKPGETMDSPTG
SRVTTFGSRGTEGFSTASGFRNTTVTFTIRPGSNQPITVQNRTSDFDGRASTRRAPSPVV
SPTETNKEMRPSSLPASASSPTLSDVFCLPSQQGSGDPFGLNTGRSRSPSPSALQQPISN
KPFTTKLVQLWTKQDVADWLESLNLGEHKETFMDNEIDGTHLPNLQKEDLIDLGVTRVGH
RMNIERALKQLLER
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttaacaatgacaacgtagtgaaggtgggccacaggcaagtggtaaacatgatt
cgtcaggggggtaaccacttagttctaaaggttgtcacggtaaccagaaatctggatcca
gaggacacagctcggaagaaagcccctccacctccaaaaagagcaccaactactgcactg
accttgcgatctaagtcaatgacctcagaacttgaagagctagtggataaagcttccatg
cgaaagaagagggataaagtagatgaaataatgtcagcttccaaaccacctagagctgga
gacaacataggaatggactcaagggtagcaactataaaacaacgtccgaccagcagatgt
ttccccttggctatagaaatgaattccatgtatgatcggcaaggtattgctgtgatgcct
cccactgttcctggaagccccagaagtccctatttgggtttacctcgaggcacaatgaga
aggcaaaaatctataggtatgaggatttttataggaattacagaggaagagaagcaattc
ttggctcctccaatgttaaaatttacaagaagtttatctatgccagactcctctgaggat
atcccacctccaccatcaacgtcagccccttctcctccttataacagtccaaaatcacct
acaacaagaagttatggaacaatcagacctggctttaatcagaattctggtacaaaaagc
cccacttcaaataggcctgacagtatgggaacaatacgaagggacaaagggacatactat
agacaagaatcagatcaatattccgtagactcagaggatccctataagcaaaacagctct
tcccaacaacaaaatttcaaaagaaaccagatgcctgaaaacccatattctgaggttgga
aagatagctaacaaagcagtgtatgttccagcaaagccagccaggagaaagggaacttta
gtgaagcagtccaatgtagaggatagcccagaaaagacctgttctattcctattcccact
atcattgtgaaagagccttccaccagcagcagtgggaaaagcagccaaggaagcagtatg
gaaattgagacccagtgttcagagcatgctggacagcttagaccagaagacagcctaagt
gttaacaatccatttgccgcagccatcgctggggcagtaaaagatagagaaaagaggtta
gaagccagacgcaactgtccagcatttctttcaactgacatgggggatgaagatattggg
ctaacaccaggtccaagattgaggcattccaagtctatagatgaagggatgtttagtaat
gaagagcattttggtcatcttagagtacagccaccattaactacatccagggggtctaca
agtacttttaatagtactgactcaaacagtcaaaatgagctgaatagtacaagaacattt
aatactactactaaagaagatgatagtgatagtaacccaggaaccacaaagagctactgc
acaactactacaaataattatgtacatccagtaactgggaagctgctagatccaaactca
cctttagctcttgctttagctgccagagacagagccatgaaagaacaaatacagcaaagt
gctggcaagggggaagctggaaaggctgaccttaataagccattatatattgatacaaaa
gtaaagtcaaatattgaaactactttccctgtgacctctacaataaacagacagacacag
cgtgctccattaaggagacaggagacggaggccaagtatgaaacggaagtggttaaagag
gacaaaaaggcagaagagaagaaaaacatgttgattagcattgtagatacctcacagcaa
aagacagctggattgttgatggtacatacaatggacgggacaaaaactgatgacaatgcc
atttgtgatagtgaaaaagaggaaaggaaaattgctctagagaattcttctactgagtta
ctaggtagcaatcaggctgtggaagatgcgtcgaaaatgtctacaacctcagatctccct
gcttctcctgcaaaagctatcatcacagttagttcagttgatgagcctgtcattttgcct
ttccgtatcccaccacctcctttggcttcagttgatattgatgaagagttcatttttact
gagccgttaccccctccattggagtttgctaatagctttgaaagccctgaggatccacca
gcaatccccactttgtcagattttataaaacaaagaaaaaatggaacttctacatcacct
tcatacaaccccaacttatcaacaaatgcattagatagtaagaaacaagttggtctttca
aactgtttgcctgctgcctttgtgccaccccctgagaattttgatagtgtcactgactct
gggattgaggaggtggacagtcgaagtagcagtgaccatcacttggaaacaaccagcact
atctcaacagtatccagtatctcaaccttatcttccgaaggtggggagaacctggatact
tgtacagtctatgcagatgggcaagcttttctggtggataagcccccagtacctccaaag
ccaaaaatgaagctcataatcaacaaaagcaatgcactttacaaagatgccctgatagag
gaaaacacggataattttgttgtccctccacctgctccacccccacctcctgctggtgca
caggcaaatgcacctgtacagcaaaggacctcaaaactgtggggtgatgcaccagagttg
aaaagcattatacccccagacccaaaggctaatgtcattagtgaattgaattcaatatta
caacaaatgaacagagacaggtcctctaaacctggggaaactatggattctcctacagga
tcaagagttaccacatttggatcaaggggtacagaaggattcagcactgcctcaggtttt
cggaatacaactgtcacttttactattcgacctggaagtaaccagcccataacagtgcag
aacaggacctcagactttgacggtagagcatctacgcgacgagctcccagtcccgtggtc
tccccaacagaaactaacaaagaaatgagaccatcatctctcccagcatctgcctcatcc
ccaaccttgtctgatgtattttgtctgcctagccagcaaggttcaggagatccctttggc
ctgaatacaggacgcagtagatccccttctccctcagctctgcaacagccaatctcaaat
aagccttttacaaccaaacttgtccaactatggacaaaacaggatgtagcggactggttg
gaaagtctaaatctaggagaacacaaagagacatttatggacaatgaaatagatggaact
catttaccaaaccttcagaaggaagatttgatagatcttggagtgactagagttgggcat
agaatgaacatagaacgagccttaaaacagcttttagagagataa
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integrated database retrieval system
