Latimeria chalumnae (coelacanth): 102357521
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Entry
102357521 CDS
T02913
Symbol
CROCC
Name
(RefSeq) ciliary rootlet coiled-coil, rootletin
KO
K16469
rootletin
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102357521 (CROCC)
Cilium and associated proteins [BR:
lcm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102357521 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
102357521
NCBI-ProteinID:
XP_014344015
LinkDB
All DBs
Position
Un
AA seq
2048 aa
AA seq
DB search
MSGRNPFKCGYMNFGCCFICQKLESSVLSSGDEKSFTLRGDSEDSPPTLLPARIREIVTR
NLTEQKSPVSPSKMASLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLE
QALRLESGERERESMENKSLAQQNIELRRRLDEEQAAYKRKLQAYQEGQQRQAQLVQKLQ
AKVKQILKSCSSLANKLLSRLDLTDSRLRQEEEHSNDLENALIRLEEEQQRSASLAQVNA
MLREQLDQANSANQALSEDIRKLTTDWTKAREELEQKEAEWRREEESFNSYFSNEHSRLL
TLWRQVVGFRRHFGEMKTVTERDLAELRNNLSKSCRTIHASCLNLSTNLRVSETSSVVTM
EKQAIQLTQLEEQLRDKVREMIQLQAQGDKQKAELNARITELKVTIERLNAQNAEKDKSI
DTLTQKIENMESSRAQEQVALEGEEIDALRAETEVLQQTLKDIAQAVISDADSGVQLTSE
ERTGEVPEVDTSILGGLGLSSSLRTPSPRRRSSPHRGRSPGRSLSPSLSNPTFSVVQSAL
QKRQLQVQDLRGKYEVSQDTLSSLKKQLQANENERCSLEQKLLQLKEEIENSSRAKDDAK
RDADRLRSSVDILGSKKSNLEKSIQALQQQIEMLRQENEKLQLANNELHRHRDNLEDEKE
DVLKDKERAQKEIERSHKAVEQLEVKHSNVKKELLLVKEALNRASLDKEVLENEKAGIAE
ALSKVETMNAEQELTLNKLKTEEASLRDSLSKMSTLNEGLVQDKTELNKIINQLEEERAA
LVGQKREVEQEKASIRDELVRLEQEKLDLDTERHGLDHSLQIVEQSREKLELDLLGLQRE
RGDLQEQLGQMTRQRNSLNDELIQAQREIERQCELLVRAAKEKEDLTKDKASLVVQLTAS
ERENRALAEEGAGLRSEKEALETTLYDIQQQLTQLETRKEQLEGENQIILLAKEALQAEV
SRVRKEMEVEMTKLERDRELLTQKLAHTEQEAQVTLKNEQASHEEDVDHLQREKEGLRLE
MEAEREELFHRLTQEREELVARHEAEKDELSEEITSLQQERDESLLISENEKQQALSLKE
SEKTILSEKLSNLQHELASSAMEIERLKRDALNRQEQDRSTINDLTAELKSFREQFEEAV
MAHEREVKALYEQIKDLGKQREASLREVEELKVQLRIAEDARDGIRRDLIEAQRRIRESQ
ESHEIQRKEILDLKRALSDEVKEKEAVQRSNEELRACIKKTESDRISLKRVVGEREQKLC
VLEEAKTIIEKEVSDLRAGLREVEKSRLEARRELQELRRQVKMLDSENTKKSKEVAELQA
RVALDEQREEESRRESFGLKQKIVETEASRESARKEITNLHRKISEIENEFRVREKDLLS
SLEEARGNEKKLLDNAKNLEIKLDNACGDISELSLKLSAAEGRINGLEAELARVEGMKRD
VEFKLGSLHSALRRTLGISRTGRTHSPAIRGHSYSPQRSRSPPKGFDNTFTTTTDGRGSP
IPRTGTPERSPGSRPVSPERSFSPTRSEQFVADIDPEVVRAALRDFLQELRDTQRDRDEN
RIHVSNLTRQLGEMEADRDGVNLRLQQLQKSLAESEEGKRGADGRLSSAQTALMLQEETI
RRNERERKGLLDKVATLERSLQSSESDKRALQEKMNKMKANEAKLENDKRKLKEILDASE
SRATKLELVRRSLEGELQRMKLVMGDRETEIQTLQDRIETLQRQVAESETKANSLKLAVD
KVTASLARAEDNEKSLREKVQTLSISLSESNASTSSFQEKMLQLQKALTASEHDRRILQE
RLDVARQAVSEAKKQNALLLDRVQVLQNEQSELELQQVELEGQIRQNQEMLRQHQESEDA
ALRNIQKLQEEKQVFQERLSSLQRALAQLENEKREVERSSVRLEKDKSALKKTLEKVERE
KLRSEEDTMRLSAEKGRLDRSLTTVEQELVEAQRQVQQFQAQLVDMEQTHTQSLVEATAR
HRQELQLETERLRSAQLQAERTLEARERAHRQRVKGLEEQISTLKDQLQQELRRRQPHYS
HSSILSGN
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagaaatccattcaagtgtggctatatgaattttggatgttgttttatttgt
cagaagcttgaaagcagtgtattgagttctggagacgaaaaaagtttcacattgcgtgga
gactcagaggattccccacctaccctccttcctgccagaatccgagaaattgtaaccagg
aacctaacggaacagaaaagcccagtgtcaccctcaaagatggcatccttgctgtctctc
caggaagaaaaccggatcctgcagcaggagctttcccgggtcgaagacctcctggcacag
agccgtgccgagcgagatgagctggctattaaatacaacgccatcagcgagcggctggag
caagccttgaggctcgagagtggtgagcgggagagggagtccatggagaacaagagcctg
gcccagcagaacattgagctccgacggcgcctggacgaggagcaggcagcttacaaacga
aagctgcaggcttatcaagagggccagcaaaggcaggctcaacttgtccagaaactgcag
gccaaggtaaaacaaattttaaaatcgtgtagtagcttggccaacaagctgcttagtcgt
ctggacttgacagattctcgcttgcgtcaggaggaagagcacagcaacgacttggaaaat
gcactcatccgtttggaagaggaacagcagaggagtgcaagcctggcccaggtcaatgcc
atgctgagggagcagctggaccaggcaaactctgctaaccaagctttaagcgaagacatc
cgcaagctgacaactgattggacaaaagcccgtgaagaactggaacagaaggaggcagag
tggaggagagaagaggagtctttcaatagctacttcagtaatgagcacagcaggctgctg
accctctggagacaagtggtgggattcaggcgtcactttggagaaatgaaaactgtcacg
gaaagggacctggccgaattgcgtaacaatctgtccaagtcctgccgcaccatccacgct
tcgtgccttaacctaagtactaacctgcgtgtgtctgagaccagctcagtggtgaccatg
gagaagcaggccatccagctgacccagctggaggaacaactaagggacaaggttcgggag
atgatacagctacaggcccagggagacaagcagaaagcagaacttaatgcaagaattaca
gaactgaaggtgacaattgagcgtttgaatgcccagaatgcagaaaaagataaatccatt
gatactttgacccagaaaatagaaaacatggagtcaagtcgagctcaagagcaggtggca
ctagaaggggaggagatcgatgccctgagagcagagacagaggtgctacagcagacactt
aaggacattgcacaggcggttatctcagatgccgacagtggtgtccaacttacctctgag
gagagaactggagaagtaccagaggttgataccagcatccttggaggtctgggcctgtct
tccagtctgcgcaccccgtctccacgccggcggtcatcaccacacagaggtcgctcgccg
ggacgaagcctttctccttccctgtcaaatcccaccttctctgtagttcagtctgcccta
caaaagcgtcagctgcaggtccaggacctgcgtggaaagtacgaagtcagccaggacaca
ctgagctccctgaagaaacagttgcaggcaaacgagaacgagcgctgctccctagagcag
aagctgttgcagctgaaagaggaaattgagaactcatcacgggccaaggatgatgccaag
agggatgctgaccgccttcgctcatctgtagacatcctgggcagcaagaagagcaacttg
gagaagagcatccaggctcttcagcagcagattgagatgctgcggcaagagaatgaaaaa
ctgcagctggccaacaacgagctgcatcggcaccgagacaaccttgaggatgagaaggag
gacgtcctgaaagataaagagagagcccagaaagaaattgaacgaagccacaaagctgtg
gagcagctagaagtgaagcactctaatgtgaaaaaagaactgctgctggttaaggaagcc
ctgaacagagcctcactggacaaggaggtgctggagaatgagaaagcaggaatagccgag
gcactctccaaggtggagacgatgaatgcagagcaggagctgaccctcaacaagctgaaa
actgaagaagcctccctccgagactcgctgtccaaaatgagcacgctcaatgaaggcctt
gtccaggataaaactgagctcaacaaaataatcaaccagcttgaagaagaaagagctgcc
ttggtgggacagaagcgtgaggtggagcaggagaaagcatcaatccgagatgagctggtc
aggctggagcaggagaagctggacctggacacggaaaggcacggcctggaccattcctta
cagattgttgagcagagccgggagaaactggaactggacctgctgggcttgcagagagag
aggggcgatctccaggaacagctggggcagatgacacggcagaggaactctctgaatgat
gagctgatccaggcgcagagggagattgagcgtcagtgtgagttgctggtccgggctgca
aaagagaaggaagacctgacaaaagacaaggcaagtctggtggtgcagctgaccgcttca
gagcgagagaatcgggctctggctgaggaaggggcaggactcaggtcagagaaagaagcc
ttggagacaactctgtatgatatccagcagcagcttacccaactggagacccgcaaggag
cagctggagggagaaaaccagatcattctcttggccaaggaagcactgcaagctgaggtt
agccgtgtgcgtaaggagatggaggtggagatgaccaagcttgagagagaccgggagctg
ctgacccaaaaactggcccatactgagcaggaggctcaggtcactctgaaaaatgagcag
gccagccatgaagaggatgtagaccacctccagagggagaaggaagggctacgactggag
atggaggcagagagagaagagctgtttcaccgtctgactcaggagcgtgaggagcttgtt
gctcgccatgaagcagaaaaagacgaactgagtgaggaaatcacgtctctgcagcaggaa
cgggacgagagcctgttgatttcagagaacgagaagcagcaggccctgtcgctcaaggag
tctgagaagacaatcctgtctgagaaactcagcaacttgcagcacgagctagccagttct
gccatggagattgagcgcctgaaacgggacgcccttaacaggcaggagcaggaccggagc
acaattaatgacctaaccgcagagctgaagagcttccgtgagcagtttgaagaagcagtg
atggcccatgagcgggaggtgaaggctctttatgagcagattaaagacttgggaaagcaa
cgagaggcgtcactgagggaggtggaggagttaaaggtccagttgagaattgcagaagat
gcccgcgatggaattcgccgagacctgattgaagctcagcggaggattcgggaaagccag
gaatcccatgagatacagcggaaagagatccttgacctgaagcgggccttaagtgatgag
gtaaaggaaaaagaggcagtgcagaggtcaaatgaggagctgcgagcctgcataaagaaa
actgaaagtgaccgaatcagtttgaaacgagtggttggagagagagagcagaagctgtgt
gtgctggaggaagccaagaccattatagagaaagaggtttctgatctcagagctggcctc
cgtgaagtggagaaatctcgtctggaggcccgcagggagcttcaggagctgagacgacag
gtgaagatgctggacagcgaaaacacaaagaaaagtaaggaggtggcggagctgcaggct
cgggtggcgcttgatgaacagcgtgaggaggaaagcaggcgggaatccttcgggctgaag
cagaagatcgtagagactgaggccagcagagagtctgccaggaaagagatcacaaacctt
catcggaaaatatccgagattgagaacgagttccgagtccgtgagaaggacctgctaagt
agcctagaagaggctcgtggcaatgagaagaagctcttggacaatgctaagaacctggag
atcaagctggataatgcctgtggcgatatctccgagctgagtctgaagctgagtgcggct
gaagggaggatcaacgggctggaggcggagttggctcgtgtagaggggatgaaacgagat
gtggaatttaaactggggagcctgcactctgcgcttaggcgtacactggggatcagtcgt
actgggcgaactcacagtccagcaatccgtgggcatagctactctccccagaggtcccgc
tctcctcctaaaggttttgataacacctttaccaccacgactgatggccgaggcagcccc
ataccgcggactggaacacctgaacgcagcccaggctctcgccctgtgtcacctgaacgc
tccttctccccaacccgcagcgagcagtttgtggcggacattgatccagaagtggtgcgg
gcagcactgcgagacttcctgcaagaactgagggatactcagagggatagggatgaaaat
cgcattcacgtatcaaacctcactcgtcagcttggagagatggaggcagatcgagatggt
gtcaacctccgactacagcaactccagaagtcactggctgagtctgaggaaggtaagcgt
ggcgcagacggaaggctaagcagtgcccagactgccctgatgctgcaagaagagaccatc
cgccgtaatgagcgtgaacgcaaagggcttctggataaggttgctaccctggaaagaagc
ctgcagtcttctgaaagtgacaaaagagccttgcaggagaagatgaataaaatgaaggcc
aatgaggccaaattggagaatgacaagcgtaagctgaaggagatcctggacgcctcggag
agccgtgctaccaagctggaactggtcaggcgctcgttggagggggagctgcagaggatg
aagctggtgatgggcgaccgagaaaccgagatccagacactgcaggatcgcattgagaca
ctgcagagacaggttgctgagagtgagacaaaggcaaattccttgaagcttgcagtggat
aaggtgactgcgtctctggccagagctgaggacaatgagaagtctctgagggagaaggtt
caaactctgtccatatcgctatcagaaagcaatgccagcaccagctcgtttcaggagaaa
atgttacagctgcagaaagcattgaccgccagcgagcatgaccgcagaatactgcaggag
cgccttgatgttgcccgccaagctgtctctgaagcaaaaaagcaaaatgccttgctgttg
gatagagtccaagttcttcagaacgagcagtccgaactagagctgcagcaggtcgagctg
gaggggcagatccgacagaaccaggagatgttgcgtcagcaccaggaaagtgaagatgct
gctctgaggaacattcagaagctgcaggaggagaaacaagtgttccaggagcgtcttagt
agcttgcagcgagccctagcccagctagaaaatgagaagcgagaggtggaacgttcttct
gtcaggctggagaaggataaaagtgctctgaaaaagacccttgagaaagtggagcgagag
aagctgagatcagaggaagacaccatgcgcctttctgcggagaagggccggctggaccga
tcactgacaacagtggagcaggagctggtggaagctcagagacaggtccagcaatttcag
gctcagttagtagacatggagcaaacccacactcagagtttggttgaagcgacagcacgc
catcgtcaggagctacagctggagacggagcgactacgcagtgcacagctacaggccgag
cgcacattagaggcacgagagagagcacacaggcagagggttaaaggactagaggaacag
atctcaactttgaaggatcagctacaacaggagctgcgtagacgccagcctcactattct
cattcctccatcctctcaggaaactaa
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integrated database retrieval system
