KEGG   Latimeria chalumnae (coelacanth): 102357590
Entry
102357590         CDS       T02913                                 
Symbol
WDR61
Name
(RefSeq) WD repeat domain 61
  KO
K12602  WD repeat-containing protein 61
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102357590 (WDR61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102357590 (WDR61)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     102357590 (WDR61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML CFAP251_N WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SCAP DSE1_N Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR41 Tricorn_2nd Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_IFT140_1st PD40 Ge1_WD40 NBCH_WD40 ASA1 Beta-prop_SPT8 PAC11 Cytochrom_D1 NUP37_N PROPPIN Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st Beta-prop_DCAF12 WDR54 WD40_like Beta-prop_pof12 UCP007778 Beta-prop_IFT122_2nd DUF2415 DUF8135
Other DBs
NCBI-GeneID: 102357590
NCBI-ProteinID: XP_006012114
Ensembl: ENSLACG00000005071
LinkDB
Position
Un
AA seq 337 aa
MMKTFLRLLDYLMVLQYPISAKKQSVSGLTGRMSTQYSILFKQEQAHDDAIWTVAWGMSE
KDGSETIVTGSLDDLVKVWKWADEKLELQWALEGHQLGVVSVDISHTGTIAASSSLDAHI
RLWDLETGKQIKLLDAGPVDAWSVAFSPDSKYLATGSHLGKVNIFGVESGKKEFSLDTRG
KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA
SDDGYIKIYDVQHASLAGTLSGHGSWVLSVAFCPDDTHFVSSSSDKSVKVWDAGSRTCVH
TFFDHRDQVWGAKYNGNGSKIVSVGDDQEVHVYDCPI
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgatgaagactttcctgcgtctgttagattatctgatggttttgcaatatcctatatca
gccaaaaagcaaagtgtttcagggttgaccggaagaatgagcacacagtacagtatactc
ttcaaacaagagcaggcacacgatgatgccatatggactgtggcctggggaatgagtgaa
aaagatggttcagagaccattgtaactggctcattagatgacctagtgaaagtctggaaa
tgggcagacgaaaagttagaactacagtgggcactggagggccatcagttaggggtggta
tcagttgacatcagtcatacagggactattgcagcctccagttctttggatgcacacatt
cgcctctgggatttggagactggcaaacaaataaagttactggatgcaggacctgttgat
gcctggagtgtggcattttctcctgactccaaatatctagcgactggaagtcacttagga
aaagtgaacattttcggtgttgaaagtggaaaaaaagaattctctttggacacaagagga
aaatttatccttagcattgcatatagcccggatggaaagtatttggctagtggagcaata
gatggaattatcaacatttttgatattgcaacaggaaaacttctgcacacgttagaaggt
catgctatgccaatcagatctttgaccttttcccctgactcacagcttttagtaaccgct
tcagatgatggttacatcaaaatttatgatgtacaacatgcaagccttgcaggtaccctg
agtggtcatggttcttgggtactgagtgttgctttttgtccagatgatacccactttgtt
tcaagttcttcagacaaaagcgtaaaggtttgggatgctggatcaagaacatgtgtacat
acattctttgatcatcgggatcaggtctggggtgcaaagtacaatggaaatggttccaaa
atcgtatctgttggagatgaccaggaagttcatgtttatgactgtccaatctga

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