KEGG   Latimeria chalumnae (coelacanth): 102357660
Entry
102357660         CDS       T02913                                 
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta 1
  KO
K05636  laminin, beta 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102357660 (LAMB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102357660 (LAMB1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN F5_F8_type_C MscS_porin ATG17_like
Other DBs
NCBI-GeneID: 102357660
NCBI-ProteinID: XP_006008503
Ensembl: ENSLACG00000006123
LinkDB
Position
Un
AA seq 1396 aa
MTRLQLQLLTVLVFWVGGLAQEPEYSYGCAEGSCYPATGDLLIGRAKNLSATSTCGVSKP
EPFCIVSHLQEEKKCFTCDSREPYDKTSNTNSHCVENVVTTFAPNRLKTWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGRTWEVYRYYAYDCESSFPGVASGP
MKKVDDIICDTRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRINFTRLH
TLGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGYDEEVEGMVHGHCMCR
HNTKGLNCEQCMDFYHDLPWRPAEGRNSNTCKKCNCNAHSTKCHFDMAVYMATGNSSSGV
CDDCQHNTMGRNCEQCKPFFYQHPERDIRDPNICEPCNCDPNGSQNKGVCDRHTDLSVGL
IAGQCRCKQNVEGERCDRCKEGFFELSADPVGCQPCECSPLGTLPGGNPCNSETGNCFCK
RLVTGKNCDECLPEHWGLSNDLDGCRPCDCDHGGSWNNDCSPETGQCLCRDHMIGRQCSE
VESGFYFIALDHYTYEAENANLGPGANIVQREYPPPDRSPTWTGLGFVRVPEGSYLEFYI
DNIPYSMEYDLLIRYEPQLPEQWEEAIITVIRPGKIPTSSRCGNTVPDDDNQVVSLPPGS
RYVVFPHPVCFEKGLNYTVRLELPRYSSSGDVEAPYTLIDSLVLIPHCKSLEIFTAGGSG
DDFVTNSAWETFQRYRCLENSQSVMKTPMTDVCRNIIFSISALLHEGALSCQCDQQGSVS
SMCDPNGGQCQCRPNIVGKNCDKCAPATYGFGPNGCRSCECNPEGSLDSFCHPVTGQCHC
ASGAYGRQCEKCLPGFWGFPNCRQCQCNSHTDYCNLQTGECIDCRDHTTGHNCERCLAGY
YGNPVLGSGDHCRPCPCPDGPGSGRQFAMGCYQDHASLQIVCACSPGYTGVRCGECAPGF
YGNPDENGGGCQQCKCNNNIDMTDPNACDKHTGMCLKCLYHTEGESCHICKLGYYGDALR
KDCRKCVCNYLGTIRDQCISSEECHCNLTTGQCPCLPNVIGQNCDRCAPNTWKLAGEEGC
KPCNCDLAHSLGPSCNEFTGQCQCMPGFGGQACSECQELFWGDPNVECQACDCDARGIQT
PQCNHTTGHCICYEGVAGPRCNMCARGYSGVFPDCKQCHRCFADWDVLIRELTTKTEQLI
ERANSVKTSGITGPYQLTINAIEEKANEIRSILAQNPATEPLSNIGNLMEEAGKIIATVT
DKVNKIEITLSATADRHNVTDSELNALQIDAQSLSNVIKELEEQLEFIKNSDVRGALDSV
SKYSQQSLDAELKVNASVADPDSIVEQSISIRQQVEDMINESIAHFEEGQKKYSDHLNEF
AGKLQSLDLSTVNEKV
NT seq 4191 nt   +upstreamnt  +downstreamnt
atgacgcggctccagctgcaacttttaactgttttagtgttttgggttggtggccttgcc
caggaaccagagtacagctatggttgtgctgagggaagctgttacccagcaacaggagat
ttattgattggtagagctaaaaatctttctgctacttccacctgtggtgtgtccaaacct
gagcccttttgtattgtcagccatcttcaggaagaaaagaagtgttttacttgtgactct
cgggagccttatgacaaaaccagcaacacgaacagccattgcgttgaaaacgtggtcact
acctttgcaccaaaccgccttaaaacttggtggcagtcagaaaatggtttggaaaatgtt
actctacagctggatttggaggcagaattccatttcactcatctcattatgaccttcaag
acttttcgtccagctgctatggtgattgagagatcatctgattttggaaggacctgggag
gtttataggtactatgcatatgactgtgagtcctcattcccgggtgttgcatctggacca
atgaaaaaagtagatgatatcatctgtgacacccgatactctgacattgagccttcaact
gaaggagaggttatttttcgtgttctggatcctgcttttagaattgaagatccgtatagc
ccaagaattcaaaacatgttaaaaatcacaaacctgaggatcaactttactagactccac
accttgggggataacctgctggactcaaggatagaaataaaagaaaaatactactatgct
atttatgacatggtggtccgtggaaactgcttttgctatggacatgctagtgaatgtgcc
cctgtcaatggatatgatgaagaagttgagggaatggtacatgggcactgcatgtgtaga
cataacactaagggtttgaactgtgagcaatgcatggacttctatcatgatctaccttgg
agaccagctgaagggcgtaacagcaatacatgcaaaaaatgcaactgcaacgcacactcc
acaaaatgtcactttgatatggctgtttatatggcaactggaaactccagcagtggagtt
tgtgatgactgtcagcataacacgatgggacgcaactgtgaacaatgcaaaccttttttc
tatcagcatccagaaagagatatacgtgatcccaacatctgtgaaccgtgcaactgtgac
ccaaatggttctcagaataagggagtctgtgaccgccacacagatttatctgttggtctt
attgctgggcagtgccgttgcaaacaaaatgtagagggtgagcggtgtgatcggtgcaaa
gaagggttttttgaattgagtgcagatccagtgggatgtcaaccttgtgaatgtagtccc
ttgggaacccttcctggaggaaatccatgtaattctgaaaccggaaactgtttttgcaaa
cgtctggtaacgggaaagaattgtgatgagtgtctgcctgaacactggggtctgagcaat
gatcttgatggatgtcgtccttgtgactgtgaccacgggggatcttggaacaatgactgt
tctccagaaacagggcagtgtctgtgcagggaccacatgattggtcgtcagtgcagtgaa
gttgaatctggtttttattttattgctcttgaccattacacttatgaggccgagaatgcc
aaccttggtccaggagcgaacatagttcaacgggagtatccccctccagaccgcagccca
acctggacaggacttggatttgtgagggttccagaaggatcgtatctggaattttatatc
gataacattccctattctatggagtatgacctcttaatcagatacgaaccacagttacca
gagcagtgggaggaagcaattattactgttatacgtcctggcaaaattccaaccagcagt
cggtgtggtaatactgttcctgatgatgacaatcaggtcgtgtctttgcctccaggatca
aggtatgtggtttttccacaccctgtatgttttgaaaaaggcttgaattacactgtccgc
ttggagctgccacgatactcctctagtggtgatgtggaagccccatatactctgatagat
tcacttgtgctcatacctcattgcaagtctctggaaatatttacggctggaggttcaggt
gatgattttgttactaacagtgcctgggagacattccaaagatatcgctgtttagagaat
agccagagcgttatgaagactcctatgactgatgtatgcaggaacattatcttcagcatt
tctgcacttttacatgaaggagcgttgtcctgccagtgtgaccaacagggctcagtaagt
tcaatgtgtgacccaaatggagggcagtgccagtgtcgtcccaatattgttggaaaaaac
tgtgacaaatgtgctcctgccacatatggatttgggcctaatggctgcagatcttgtgaa
tgcaatccagaaggttctttggattctttttgccaccctgtgactggtcagtgtcactgt
gcttctggtgcttatgggcgtcagtgcgaaaaatgcctgccagggttctggggattccct
aactgtcgccagtgtcagtgtaatagccatacagattactgcaatttgcaaactggtgaa
tgcatagactgcagagatcacacaacaggccacaactgtgaaagatgtctggcaggatac
tatggaaacccagtcttgggatctggagatcattgccgtccttgcccatgccctgatggc
ccaggcagtggacgccaatttgcaatgggttgctatcaggaccacgcttcgttgcaaatt
gtgtgtgcttgtagccctggatatacaggtgttaggtgtggtgaatgcgctcctggtttc
tatggcaacccagatgagaacggtggaggttgtcagcaatgtaaatgcaataacaacatt
gatatgactgatccaaacgcttgtgataagcatacaggaatgtgcttaaagtgtctgtac
cacacagaaggtgaaagctgccacatctgtaaacttggttactatggtgatgcattgcga
aaagactgcagaaaatgtgtgtgtaattacctgggcacaattcgtgaccaatgcatttca
tcagaggagtgtcattgtaacctgacaactggccagtgcccatgtcttcctaatgtgatt
ggacagaactgtgaccgctgtgcaccaaatacttggaaactggctggtgaagaaggatgc
aaaccttgtaattgtgatcttgcccattccttaggcccatcttgtaatgagttcacaggg
cagtgtcagtgtatgcctgggtttggagggcaggcctgcagtgagtgccaggagttattc
tggggggatcctaatgtggagtgtcaggcttgtgactgtgatgccagaggtatccagaca
cctcagtgtaaccataccactggccattgcatctgttatgaaggtgtcgcagggcctcgc
tgcaatatgtgtgctcgtggatactcgggtgtctttccagactgcaagcagtgtcatcgg
tgctttgccgattgggatgtcctcataagagaactgaccaccaagactgaacaacttatt
gagagggcaaactctgttaaaaccagtggaatcactggaccataccagcttactatcaat
gcaatagaggaaaaagctaatgaaatcagaagtattcttgctcagaatccagccactgaa
cctcttagcaacattggaaatctcatggaagaagcagggaaaattatcgcaactgttaca
gacaaagtcaataaaattgaaattacgctctctgcgactgctgatcgccataatgtcact
gattcggaattgaatgcacttcagattgatgcccagagcttgagtaatgtgattaaagaa
cttgaagagcagcttgagtttatcaagaactcagatgtccgtggggctttggacagtgtc
agcaagtattcccaacagtccctggatgcagaactgaaagttaatgcttctgtcgctgac
cctgacagtatcgtagagcaatccatttccatccgacagcaagtagaagacatgattaat
gaaagtatagcccattttgaagaagggcagaagaagtattcagaccatctgaatgagttt
gctggcaagttacagagcttagatctgtcaacagttaatgaaaaggtatga

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