Latimeria chalumnae (coelacanth): 102357660
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Entry
102357660 CDS
T02913
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta 1
KO
K05636
laminin, beta 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102357660 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102357660 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
MscS_porin
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102357660
NCBI-ProteinID:
XP_006008503
Ensembl:
ENSLACG00000006123
LinkDB
All DBs
Position
Un
AA seq
1396 aa
AA seq
DB search
MTRLQLQLLTVLVFWVGGLAQEPEYSYGCAEGSCYPATGDLLIGRAKNLSATSTCGVSKP
EPFCIVSHLQEEKKCFTCDSREPYDKTSNTNSHCVENVVTTFAPNRLKTWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGRTWEVYRYYAYDCESSFPGVASGP
MKKVDDIICDTRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRINFTRLH
TLGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVNGYDEEVEGMVHGHCMCR
HNTKGLNCEQCMDFYHDLPWRPAEGRNSNTCKKCNCNAHSTKCHFDMAVYMATGNSSSGV
CDDCQHNTMGRNCEQCKPFFYQHPERDIRDPNICEPCNCDPNGSQNKGVCDRHTDLSVGL
IAGQCRCKQNVEGERCDRCKEGFFELSADPVGCQPCECSPLGTLPGGNPCNSETGNCFCK
RLVTGKNCDECLPEHWGLSNDLDGCRPCDCDHGGSWNNDCSPETGQCLCRDHMIGRQCSE
VESGFYFIALDHYTYEAENANLGPGANIVQREYPPPDRSPTWTGLGFVRVPEGSYLEFYI
DNIPYSMEYDLLIRYEPQLPEQWEEAIITVIRPGKIPTSSRCGNTVPDDDNQVVSLPPGS
RYVVFPHPVCFEKGLNYTVRLELPRYSSSGDVEAPYTLIDSLVLIPHCKSLEIFTAGGSG
DDFVTNSAWETFQRYRCLENSQSVMKTPMTDVCRNIIFSISALLHEGALSCQCDQQGSVS
SMCDPNGGQCQCRPNIVGKNCDKCAPATYGFGPNGCRSCECNPEGSLDSFCHPVTGQCHC
ASGAYGRQCEKCLPGFWGFPNCRQCQCNSHTDYCNLQTGECIDCRDHTTGHNCERCLAGY
YGNPVLGSGDHCRPCPCPDGPGSGRQFAMGCYQDHASLQIVCACSPGYTGVRCGECAPGF
YGNPDENGGGCQQCKCNNNIDMTDPNACDKHTGMCLKCLYHTEGESCHICKLGYYGDALR
KDCRKCVCNYLGTIRDQCISSEECHCNLTTGQCPCLPNVIGQNCDRCAPNTWKLAGEEGC
KPCNCDLAHSLGPSCNEFTGQCQCMPGFGGQACSECQELFWGDPNVECQACDCDARGIQT
PQCNHTTGHCICYEGVAGPRCNMCARGYSGVFPDCKQCHRCFADWDVLIRELTTKTEQLI
ERANSVKTSGITGPYQLTINAIEEKANEIRSILAQNPATEPLSNIGNLMEEAGKIIATVT
DKVNKIEITLSATADRHNVTDSELNALQIDAQSLSNVIKELEEQLEFIKNSDVRGALDSV
SKYSQQSLDAELKVNASVADPDSIVEQSISIRQQVEDMINESIAHFEEGQKKYSDHLNEF
AGKLQSLDLSTVNEKV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggctccagctgcaacttttaactgttttagtgttttgggttggtggccttgcc
caggaaccagagtacagctatggttgtgctgagggaagctgttacccagcaacaggagat
ttattgattggtagagctaaaaatctttctgctacttccacctgtggtgtgtccaaacct
gagcccttttgtattgtcagccatcttcaggaagaaaagaagtgttttacttgtgactct
cgggagccttatgacaaaaccagcaacacgaacagccattgcgttgaaaacgtggtcact
acctttgcaccaaaccgccttaaaacttggtggcagtcagaaaatggtttggaaaatgtt
actctacagctggatttggaggcagaattccatttcactcatctcattatgaccttcaag
acttttcgtccagctgctatggtgattgagagatcatctgattttggaaggacctgggag
gtttataggtactatgcatatgactgtgagtcctcattcccgggtgttgcatctggacca
atgaaaaaagtagatgatatcatctgtgacacccgatactctgacattgagccttcaact
gaaggagaggttatttttcgtgttctggatcctgcttttagaattgaagatccgtatagc
ccaagaattcaaaacatgttaaaaatcacaaacctgaggatcaactttactagactccac
accttgggggataacctgctggactcaaggatagaaataaaagaaaaatactactatgct
atttatgacatggtggtccgtggaaactgcttttgctatggacatgctagtgaatgtgcc
cctgtcaatggatatgatgaagaagttgagggaatggtacatgggcactgcatgtgtaga
cataacactaagggtttgaactgtgagcaatgcatggacttctatcatgatctaccttgg
agaccagctgaagggcgtaacagcaatacatgcaaaaaatgcaactgcaacgcacactcc
acaaaatgtcactttgatatggctgtttatatggcaactggaaactccagcagtggagtt
tgtgatgactgtcagcataacacgatgggacgcaactgtgaacaatgcaaaccttttttc
tatcagcatccagaaagagatatacgtgatcccaacatctgtgaaccgtgcaactgtgac
ccaaatggttctcagaataagggagtctgtgaccgccacacagatttatctgttggtctt
attgctgggcagtgccgttgcaaacaaaatgtagagggtgagcggtgtgatcggtgcaaa
gaagggttttttgaattgagtgcagatccagtgggatgtcaaccttgtgaatgtagtccc
ttgggaacccttcctggaggaaatccatgtaattctgaaaccggaaactgtttttgcaaa
cgtctggtaacgggaaagaattgtgatgagtgtctgcctgaacactggggtctgagcaat
gatcttgatggatgtcgtccttgtgactgtgaccacgggggatcttggaacaatgactgt
tctccagaaacagggcagtgtctgtgcagggaccacatgattggtcgtcagtgcagtgaa
gttgaatctggtttttattttattgctcttgaccattacacttatgaggccgagaatgcc
aaccttggtccaggagcgaacatagttcaacgggagtatccccctccagaccgcagccca
acctggacaggacttggatttgtgagggttccagaaggatcgtatctggaattttatatc
gataacattccctattctatggagtatgacctcttaatcagatacgaaccacagttacca
gagcagtgggaggaagcaattattactgttatacgtcctggcaaaattccaaccagcagt
cggtgtggtaatactgttcctgatgatgacaatcaggtcgtgtctttgcctccaggatca
aggtatgtggtttttccacaccctgtatgttttgaaaaaggcttgaattacactgtccgc
ttggagctgccacgatactcctctagtggtgatgtggaagccccatatactctgatagat
tcacttgtgctcatacctcattgcaagtctctggaaatatttacggctggaggttcaggt
gatgattttgttactaacagtgcctgggagacattccaaagatatcgctgtttagagaat
agccagagcgttatgaagactcctatgactgatgtatgcaggaacattatcttcagcatt
tctgcacttttacatgaaggagcgttgtcctgccagtgtgaccaacagggctcagtaagt
tcaatgtgtgacccaaatggagggcagtgccagtgtcgtcccaatattgttggaaaaaac
tgtgacaaatgtgctcctgccacatatggatttgggcctaatggctgcagatcttgtgaa
tgcaatccagaaggttctttggattctttttgccaccctgtgactggtcagtgtcactgt
gcttctggtgcttatgggcgtcagtgcgaaaaatgcctgccagggttctggggattccct
aactgtcgccagtgtcagtgtaatagccatacagattactgcaatttgcaaactggtgaa
tgcatagactgcagagatcacacaacaggccacaactgtgaaagatgtctggcaggatac
tatggaaacccagtcttgggatctggagatcattgccgtccttgcccatgccctgatggc
ccaggcagtggacgccaatttgcaatgggttgctatcaggaccacgcttcgttgcaaatt
gtgtgtgcttgtagccctggatatacaggtgttaggtgtggtgaatgcgctcctggtttc
tatggcaacccagatgagaacggtggaggttgtcagcaatgtaaatgcaataacaacatt
gatatgactgatccaaacgcttgtgataagcatacaggaatgtgcttaaagtgtctgtac
cacacagaaggtgaaagctgccacatctgtaaacttggttactatggtgatgcattgcga
aaagactgcagaaaatgtgtgtgtaattacctgggcacaattcgtgaccaatgcatttca
tcagaggagtgtcattgtaacctgacaactggccagtgcccatgtcttcctaatgtgatt
ggacagaactgtgaccgctgtgcaccaaatacttggaaactggctggtgaagaaggatgc
aaaccttgtaattgtgatcttgcccattccttaggcccatcttgtaatgagttcacaggg
cagtgtcagtgtatgcctgggtttggagggcaggcctgcagtgagtgccaggagttattc
tggggggatcctaatgtggagtgtcaggcttgtgactgtgatgccagaggtatccagaca
cctcagtgtaaccataccactggccattgcatctgttatgaaggtgtcgcagggcctcgc
tgcaatatgtgtgctcgtggatactcgggtgtctttccagactgcaagcagtgtcatcgg
tgctttgccgattgggatgtcctcataagagaactgaccaccaagactgaacaacttatt
gagagggcaaactctgttaaaaccagtggaatcactggaccataccagcttactatcaat
gcaatagaggaaaaagctaatgaaatcagaagtattcttgctcagaatccagccactgaa
cctcttagcaacattggaaatctcatggaagaagcagggaaaattatcgcaactgttaca
gacaaagtcaataaaattgaaattacgctctctgcgactgctgatcgccataatgtcact
gattcggaattgaatgcacttcagattgatgcccagagcttgagtaatgtgattaaagaa
cttgaagagcagcttgagtttatcaagaactcagatgtccgtggggctttggacagtgtc
agcaagtattcccaacagtccctggatgcagaactgaaagttaatgcttctgtcgctgac
cctgacagtatcgtagagcaatccatttccatccgacagcaagtagaagacatgattaat
gaaagtatagcccattttgaagaagggcagaagaagtattcagaccatctgaatgagttt
gctggcaagttacagagcttagatctgtcaacagttaatgaaaaggtatga
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integrated database retrieval system