Latimeria chalumnae (coelacanth): 102357673
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Entry
102357673 CDS
T02913
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102357673
03015 mRNA surveillance pathway
102357673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102357673
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102357673
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102357673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
102357673
NCBI-ProteinID:
XP_005988771
Ensembl:
ENSLACG00000018608
LinkDB
All DBs
Position
Un
AA seq
370 aa
AA seq
DB search
MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDPGCKYPQCLCLS
PTYELALQTGKVIEQMGKFYPDVKLEYAVRGNKLERGQKVSEQIVIGTPGTVLDWCSKLK
FIDPKRIKVFVLDEADVMIATQGHQDQSIRIQRMLPGDCQMLLFSATFEDSVWKFAQKVV
PEPNIIKLKREEETLDTIKQFYVQCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWL
AGELSKEGHQVALLSGEMMVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFD
LPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKIVKLDAD
DLDEIEKIAN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaacagaccttccaaaatccaggagaatgctctacccatgatgcttgctgaa
cccccacagaacctgattgcccaatctcagtcaggcactggtaaaacagcagcctttgta
ctggctatgttgagtcgagtcgaccctggctgcaaatatcctcagtgcttgtgtctgtct
ccgacatatgaactggcgctgcagacggggaaggtgattgaacagatggggaagttctac
cctgatgttaaacttgagtatgcagttagaggcaacaaacttgagaggggccagaaggtt
tctgaacagatcgtgattgggacccctggaaccgtgctggactggtgctctaaactgaag
ttcattgacccaaagaggattaaagtctttgtcttggatgaggctgatgttatgattgcc
acccagggtcatcaggatcagagtattcgcattcagaggatgttgcctggagactgtcag
atgctgctgttttctgcgacttttgaagactccgtgtggaagtttgcccagaaggtggtt
ccagaaccaaatatcatcaaactgaagcgagaagaggagacgctcgacacaatcaaacaa
ttttatgtacaatgcaacagcaaagaggagaagtttcaagccctgtgtaacatctacgga
gctattacaatagcccaagctatgatcttttgccatactcggaagactgctggttggtta
gcaggtgaattgtcaaaggagggccaccaggtggcattattgagtggagaaatgatggtg
gagcagagggctgctgtaatagaccgtttccgggagggcaaagagaaagtgttggtaaca
acaaatgtctgtgcgagaggtattgacgtggagcaggtgtctgtagttataaactttgac
ttgccggtggataaagatggaaacccagataatgagacatatctgcacagaattgggcgc
actggtcgctttggcaagcggggactggctattaacatggtggatagcaagcacagcatg
aacatcctcaacagaatccaggaacacttcaataagaagatagtgaagttagatgccgat
gacttagatgaaattgagaagattgccaattaa
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