Latimeria chalumnae (coelacanth): 102357683
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Entry
102357683 CDS
T02913
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta 1, catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03030
DNA replication
lcm03410
Base excision repair
lcm03420
Nucleotide excision repair
lcm03430
Mismatch repair
lcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102357683 (POLD1)
03410 Base excision repair
102357683 (POLD1)
03420 Nucleotide excision repair
102357683 (POLD1)
03430 Mismatch repair
102357683 (POLD1)
03440 Homologous recombination
102357683 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcm03032
]
102357683 (POLD1)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102357683 (POLD1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102357683 (POLD1)
DNA replication proteins [BR:
lcm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
102357683 (POLD1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
102357683 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
102357683 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
102357683
NCBI-ProteinID:
XP_014341005
Ensembl:
ENSLACG00000015315
LinkDB
All DBs
Position
Un
AA seq
1080 aa
AA seq
DB search
MDLKRRNAFGGALPSSQAKRPRGGDWDEDGPSQFEEELAYLDDIESEMMMQMEEEKGSSP
QDVDSIRKSVLGVKNPRWLRPVLPNINPKTDVLCFQQVELEHYVGSHISGMPGATHGPVP
VIRMFGITMEGNSVCCHVHGFAPYFYVPVQNGFSQEHLSEFKRELNTVVIRDMRSNKDSI
SQAVLAVDICEKESIYGYHGKRKIPFLKITMALPRLIAPAKRLLEQGFRFGPFSVQAYQS
YEANIDFEIRFMVDNDVVGCNWIELPPGKYRIREELSRGELTRENPGKVSLCQIEVDIGV
NDFISHPAEGEWQKIAPLRVLSFDIECAGRKGIFPEPEKDPVIQIANMVLRQGEKDPFIR
NVFTLNSCAGIVGSKVLSFEKESQLLQEWADFIRVVDPDIITGYNIQNFDLPYLLNRART
LKVAAFPHLSRIPAIKSVIKDSSFQSKQMGRRENKVINIEGRVQFDLLQVLLRDYKLRSY
TLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLEKLMCVINY
MEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKSEGGEDYTGATVIEPIKG
YYDVPIATLDFSSLYPSIMMAHNLCYTTLLQHGAVDKYSLSPEDFIKTPTGDHFVKKSVR
KGLLPEILENLLAARKKAKNELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLP
CLEISQVIYGDTDSVMCKLGVSSVEEAMGIGREAAEWVSGHFVFPIKLEFEKVYFPYLLI
NKKRYAGLYFSSSSHTHDKMDCKGIETVRRDNCPLVANLINTCLQKILIDRDPTGAVEHA
KDVISDLLCNRIDISQLVITKELTRTADEYAGKQAHVELAQRMRKRDAGSAPNLGDRVPY
VIVKAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQLAKPLLRIFEPILGETKAESILL
KGEHTRCKTVLTSKVGGLTAFTKKRSTCIGCKALLKDDGAVCDYCSSRQSELYQKEISHL
SSLEEKFARLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLGDQERLVSRFGPPTW
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaagcggagaaatgcgtttggtggagcacttccctcctcccaggcaaagcgc
ccacgtggtggggactgggatgaggacgggccttcacagttcgaggaggagctggcctac
ctggatgacatcgagtcggaaatgatgatgcagatggaggaggagaaagggtcttcacca
caggatgtagattccatcaggaagtctgttttgggggtgaagaatccaaggtggctgcgc
cccgtgctcccaaatatcaaccccaagactgatgtgctgtgtttccagcaagtggaactc
gagcattatgtgggttcccacatttctggaatgccaggagccacacacggccccgtgccc
gttatccgcatgtttggaattaccatggaggggaacagcgtttgttgccatgtgcatggc
tttgcgccatatttctatgtgccggtgcaaaatggcttttcccaggagcacctcagtgag
ttcaagcgggagttgaatacagtggtgatacgggacatgagatccaacaaggatagcatc
tcgcaggctgtgctggccgtggacatctgtgagaaagagagtatctatggttaccacggg
aagaggaagatccctttcctaaagatcaccatggcattaccccgattgattgcccccgcc
aagcggctcctagaacaagggttccgcttcgggcccttctcagtccaggcctaccagtcc
tatgaggcaaacatcgactttgaaatcagattcatggttgacaatgatgtggttggctgt
aattggattgaacttcctcctgggaaatacagaattcgggaggagctctcgcgaggggag
ttgactcgagagaatcctgggaaggtttctctgtgtcagattgaggtcgacattggggtg
aatgattttatcagccaccctgcagaaggcgaatggcaaaaaattgcaccattgcgtgtg
ctgagttttgatatcgagtgtgctggcaggaaaggaatctttccggagcctgagaaggat
ccagtgatccagattgccaacatggtactgcgtcagggggagaaggacccctttatccgg
aatgtcttcacgctgaacagctgcgctggtatcgtgggctctaaggtgctcagctttgag
aaggagagccagctcctccaggagtgggcggactttattcgtgtggtggaccctgacatc
atcactgggtataacattcagaactttgacctcccttacctcctgaaccgtgcacgcaca
ctcaaggttgctgcctttccccatttgagccgaatccctgccatcaaatccgtgattaaa
gattcctccttccagtcgaaacagatgggccgtcgggaaaacaaagtcatcaatattgag
gggagagtacagtttgacctcctgcaggttctgctgcgcgattacaagctgcgctcctac
accctgaacgccgtcagtttccacttcctgcaggaacagaaagaagatgtccagcattcc
atcatcacggatctgcagaacggtaatgagcagacgcgccggcgactggccgtttactgt
ctgaaggatgcttatctgcctctccgactgctggagaaactcatgtgtgtcattaactac
atggagatggcacgagtgacaggagtgccgctcagctacctgctctccagggggcagcag
attaaagtggtgtcacagctgctcagacaggcgatgaagcaggacctagtgatgcctgtg
gtgaagtcggaaggaggcgaagactataccggggcaacagtcattgagccaataaagggg
tactacgatgtcccaatcgccacactagatttttcctctctgtacccctccatcatgatg
gcacacaatctctgctacaccacactactccaacatggggcagttgacaaatacagtctt
tctccagaagattttatcaaaactccgactggggatcattttgtgaagaaatctgtcagg
aaggggcttctccctgagattctagagaacctattagcggcaaggaaaaaggccaagaac
gagctgaaaaaggagacagaccccttcaagcaaaaggttctggacggccgacagctggcg
ctgaaagtgagcgccaactcagtctacggtttcacaggggcgcaggtgggcaaactgccg
tgtctggagatctcacaggtgatttatggtgacacggactccgtgatgtgtaagctaggg
gtcagctctgtggaagaggccatgggaattggcagagaggcagcggagtgggtctccggt
cactttgtgtttccaatcaaactggagtttgaaaaggtgtatttcccataccttctcatt
aacaagaaacgctatgctggcctctacttctcctccagctcccacacccacgacaagatg
gactgcaagggtatcgaaactgtccgtagggataactgccccctagtggccaacctcatc
aacacctgtctgcagaagattctgattgatagggatcccacaggtgcagtggagcacgct
aaggatgtgatttcagacctgctgtgcaaccggatcgacatctcgcagctggtaataaca
aaggaactgacacggacagcagatgaatatgctggaaagcaggcgcacgtggaactggcg
cagagaatgcgtaagcgagatgctggcagtgcgccgaacctgggcgaccgtgtaccttat
gtcattgtcaaagcagcaaagggtgtggcggcctacatgaagtcagaggatccaatctac
gtcctggagaataacattccgattgacacgcagtattacctggagcagcagctggccaaa
ccactcctccggatttttgagcccatccttggggagaccaaggctgagtccatcctgctc
aagggtgaacacacccggtgtaagaccgtgctgacgtcgaaagtgggcggacttacagca
ttcaccaagaagcgcagtacctgcatcggctgcaaggcgctgctgaaagacgatggtgct
gtttgcgattactgcagctcccggcagtccgagctataccagaaggagatttcacacctt
agttcgttagaggagaagtttgctcgcttgtggacacagtgccagagatgccaagggagc
ctccatgaggatgttctatgtaccagccgagactgtccgatattctacatgcgcaaaaag
gttcagaaagacctcggtgatcaggaaaggctggtaagtcgatttggacccccaacgtgg
taa
DBGET
integrated database retrieval system
