Latimeria chalumnae (coelacanth): 102358224 Help Entry 102358224         CDS       T02913                                  Symbol ARID1B Name (RefSeq) AT-rich interaction domain 1B   KO K11653   AT-rich interactive domain-containing protein 1 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     102358224 (ARID1B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:lcm03000]     102358224 (ARID1B)    03021 Transcription machinery [BR:lcm03021]     102358224 (ARID1B)    03036 Chromosome and associated proteins [BR:lcm03036]     102358224 (ARID1B) Transcription factors [BR:lcm03000]  Eukaryotic type   Helix-turn-helix    ARID     102358224 (ARID1B) Transcription machinery [BR:lcm03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      102358224 (ARID1B) Chromosome and associated proteins [BR:lcm03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     102358224 (ARID1B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  BAF250_C ARID Motif Other DBs NCBI-GeneID:  102358224 NCBI-ProteinID:  XP_005995139 LinkDB All DBs Position Un AA seq 2319 aa AA seqDB search MAAQVAAAPPANPNSKTPGLSANLNPDLNSAKAAGPGSGAGAGSMLGVAGDGTGTGTGTT TTTTNNGMNNVDHHHHHHHHHHQQQQHHQHLHLQSEMNMANATSASSNNNNNNNNSGSSS GGNNGSSGGGSSSSESGQKESGNSAVSSNSNPGASSTMETGLIPNHKLKNVGGDPPPPQH PHHHHHQLNQFQQQHHHHLPNNNINSSSQPAEMETQQPHAGKENNNNNILGNQADQQQQH HHPQQQMLSKSEEEELAGSKMGDQLGGRYDHPNLGPAASQQPQGGGGGNPGSSGSLPEFN YYGSASRGGPCFDQHGGQQSPGMGIMHPSAPNSMDPAQNSHEGGQYNQYNYPAYRPSYGG SGYGMMSSPRQGSSMMMGPGSSASHGKPALAGGGGGAAAVGFQRFSGQSQHPSGATPTLN QLLTSPSPMMRGYGSSYPDYSSPSAPLAPPPPQPQPQQQTGMGLGKDMGSQYSAVNPGWG AQQRNHPAMSPGNTGQPINRPQASPMESMMMKRPQPYGMGSNPYSQQQQQQQQQQQGGPF PGQSYGPPTPQRYPVAMQTRNHSTMGGMQYPQQQMPPQYSQQGMGGYCQQSQQPYYNQQQ QPVPSPQAPYMQQPQLRYQPQQDMSQETYGARSQAPMTPGKPNHEDINLIQQERPSSLPD LSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIRGGPSPSPV GSPVGSNQSRSGPISPASIPGSQMAPQTPGSQSEASTHPAMSQSPMPQDRGYMPGIQRNP QMSQYGPQQTGPSMSPHPSPGGGQMHPGLGGYQQSNSSGTYGPQIGQYGSQGNYSRHPNY GGMPSTNYSGPGPGMGNSMGMNTNSQIHGQVPSQPCGTMPMGRMPAGGMPSRAFSGSISN MTPNSPGMPQQGGPGMGPPMPSVNRKAQEAAAAVMQAAANSAQNRPPYIRSPAYPSQSGP GGRPMFPSQHPNYGNAQAPMMHQPDQYGQGSFPGMNQSGMMGSSSPYSQPMNSNSGMMNP QGPSYNMAANLVNSSTAPMGLGADLMTPGESKLPGPHKADSKEEGPQQTESKSKKSATSA TTGDKIVKLYEMGAEAERKLWVDRYLLFMEEKGTPVTNMPAVGKKPLDLFRLYVCAKEIG GLAQVNKNKKWRELASNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSSAE SKKQPKIQPPSPANSGSLQGPQTPQSSGSSSMAEAPDLKPPTPVSTPHGQMPPMQGSRTG AINVQDPFCDASDTTFQKRNSMTPNAPYQQGMNMQDVMGRTSYEPNKDPFGGMRKVPGSN EPFMSPGQLPNSGMQDMYNRVPSGAMSNMGMGQRQQYPYGPGYDRRPDYGMGPEGSMGPP GQTNMVPSNNDPSLYSPNRYPAQQRHESYGQQYPGQGPPSGQSPYGGHQPGMYPQQQNYK RHLDGMYGPPVKRHHEGDMYNMQYSNQQQDMYNQYGSTYSGPERRPLQGQYPYPFNRERM QGPGQMQQHGMPPQMMGGPMQSSGGDVPQQNIWQSRNDMPYPYQNRQGPGGPSQAPQYSA MNRNEDMMVPDQRINHESQWPSHINQRQPSYITTSASMPPITRPPQSSYQTPPSMPNHIS RAPSPASFQRSLENRMSPSKSPFLPSVKMQKGMPPVPASQVTVPPAQPPPIRREITFPPG SVEATPPVLKARRKITSKDIGAPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSVSTF NLTQLPGFLELLVEYFRKCLIDIFGILKEYEVGDPGQNALLDKAAVKKDEETESKADDSG QEDKEDEDENSEDNGENLPETMENGIAGDSPNAELGIIVEKPKQASKFDKLPVKIVKKDD LFVIDRSDKLGRVQEFNSGLLHWQIGGGDTTEHIQTHFESKLEVPPRKQVVSPMGTQNKE KKKKEVERMGQSKTEQLEKSIMATIDDVLSARPGALPEDHCSSLSLQKANSMFLFEIHQA RNHRNIKLVEDEPRSRDETPLCTITDWQDSLTKRCICVSNIMRSLSFVPGNDTEMSKHPG LVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGIACSKDEWWWDCLEVLRENTLVTLAN ISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGLNSVLSPQRLVLETLCKLS IQDNNVDLILATPPFSRQEKLYATLVRYVGERKNLVCREMSVALLSNLAQGDTLAARAIA VQKGSIGNLISFLEDGVTMAQFQQSQHNLMHMQPPLLEPPSVDMMCRAAKALMAMAKVDE NRSEFLLHEGRLLDISISSVLNSFVASVICDVLFQIGQL NT seq 6960 nt NT seq  +upstreamnt  +downstreamnt atggccgcgcaagtggcagcagctcctccggcgaatccgaacagcaaaactcccggtttg tctgcgaatctaaatccggatctgaactcggcaaaagcggcggggccaggctccggggcc ggcgccggatcgatgctgggggtggccggcgatgggaccggcaccggcaccggcaccacc accaccaccaccaacaacggcatgaataatgtagatcatcaccatcaccaccaccaccac caccaccaacaacaacaacaccaccagcacctccacctccagagtgaaatgaacatggcc aatgcaacttctgcttcttcaaacaacaacaataataacaataatagtggcagcagcagt ggtggtaacaacggtagcagcggcggcggcagcagcagctcggagagcgggcagaaggaa agtggcaactcggctgtctcctccaactcgaatccaggcgcgtcttccaccatggagacg ggtctgatccccaatcataaactgaaaaacgttgggggagatcccccaccaccccagcac ccgcaccaccatcaccaccaactgaaccaatttcagcagcagcaccaccaccaccttcca aataacaacatcaacagcagcagccagccggcagaaatggagacccagcaacctcacgcc ggcaaggagaacaacaacaataatattttaggaaatcaggccgatcagcagcagcagcat catcatccccagcagcaaatgctgagtaaaagtgaggaggaagagctggctggcagcaaa atgggggatcagctgggcggcaggtacgaccaccctaacctggggccagccgccagccag cagccccaaggcggcgggggtgggaaccccggtagcagcggcagcctgccggagtttaat tattatggcagtgctagcagaggagggccttgctttgatcaacatggcggacaacaaagc cctgggatggggataatgcacccttcggctccgaatagcatggatccagcgcagaactcc cacgaaggcggccagtataaccagtacaattaccccgcctacaggcccagctatggcggc tctggctatggcatgatgagctctccacgccaagggagcagcatgatgatgggcccaggc agcagtgctagtcatggcaagcctgctcttgctggagggggagggggtgctgctgctgtt ggtttccagaggttttcagggcagagccagcacccttctggggctacccccaccctcaac cagctcctgacttcccccagccccatgatgaggggttacggcagcagctacccggattac agcagccccagtgcccccctggcaccaccaccgccacagccacagccacagcaacagaca ggcatggggctgggcaaagacatgggctctcagtattcagctgtaaacccaggctgggga gcacaacaaagaaatcaccctgctatgagccctggaaacactggacaacccatcaacaga ccacaggctagtcctatggaatctatgatgatgaagagacctcagccatatggaatgggc agcaacccttactcccagcagcaacaacagcagcagcaacaacaacaaggtgggcctttc cctggacagtcatacgggccgccaaccccacagcgatatccagtggccatgcagacaagg aaccatagcaccatgggaggaatgcagtatccacagcaacagatgcctcctcagtacagt cagcagggtatgggtggctactgccagcagagccaacaaccctactacaaccagcagcag cagccggtgccatcaccgcaggccccatacatgcagcagccacagctgaggtaccagccc caacaggacatgtctcaggaaacctatggagccaggtctcaagcccccatgactcctgga aaacccaaccatgaagacattaacttaattcaacaggagagaccctccagtttaccagac ctctctgggtcaatcgacgacttgcctacaggaactgaagccaccctgagctcagcagtg agtgcttcggggtctacaagcagtcagggggagcagagtaacccggcacagtctccattc tcacctcatgcctctccacacctgtctggcatccgagggggcccgtcgccttcccctgtt ggctctcctgtgggaagcaaccagtccagatctggacccatttctcctgcaagtattcca ggcagtcagatggcgccccagactccaggtagccaatcagaggcgagcacccatcccgcc atgagccagtcgccaatgcctcaggatcgaggttatatgccaggcatccaaaggaaccct caaatgtctcaatatggacctcagcaaactggcccttccatgtcgcctcacccctcacct ggaggagggcagatgcaccctggtttaggaggttaccaacagagcaactctagtggtacc tatggccctcagattggccagtatggatctcaaggtaactattccagacatcccaactac gggggaatgcccagcaccaactatagtggcccaggaccgggtatgggcaatagtatgggc atgaacactaacagccagatacacggccaggtcccaagccagccttgtggcaccatgccc atggggaggatgccagcaggtgggatgccaagcagggctttctctggaagcatcagcaac atgacccccaactctcctggcatgccgcagcagggtggcccagggatgggcccacccatg ccttcagtgaaccgtaaggcacaggaggcagctgctgctgtgatgcaggctgcggctaac tcagcacaaaataggccaccatacattaggtcgcctgcttatcccagtcagtctgggcct ggcggacgccccatgtttccttcacagcatcccaactatggcaacgctcaggctcccatg atgcaccagcctgatcagtacgggcaaggtagtttcccaggtatgaatcagagtggtatg atgggttctagctccccctacagccaacccatgaacagtaactcgggaatgatgaatcca caaggtccttcttacaacatggcggctaacctggtgaacagctccacagcacctatgggt ctgggggcagacctgatgactcctggagaatccaagcttccagggcctcacaaagccgac agcaaagaagaaggaccccagcagaccgagagcaagtctaagaagtctgccacgtccgct acaactggagataagatcgtgaagctgtacgagatgggggctgaagcagagcgcaagctg tgggtggatcgctacctgttgttcatggaggagaaggggacgcctgtgaccaacatgcct gctgtgggcaagaagcccctggacctgttccgactctacgtctgtgccaaagagatcggg ggactggcacaggttaataaaaacaagaaatggcgtgagctggcaagcaatctgaacgtt ggcacctcaagcagcgcggccagctccctcaagaagcagtacatccagtacctcttcgcc tttgagtgcaagattgaacgtggggaggaacccccgccggaggtcttcagctcagcagaa tccaagaagcaacctaagatccagccgccatctcctgctaattccggctcactacaaggt ccgcagaccccgcagtcttcaggcagcagttcgatggcggaggcgccagatctgaaacct ccaactccagtatctacgccacatggacaaatgcctcccatgcagggcagtagaactggt gccattaatgtgcaggatcccttctgcgatgcaagtgacacaacattccagaaacgaaac tccatgacgccgaatgccccctaccagcaggggatgaacatgcaggacgtgatgggcaga acgtcctacgagcccaacaaggacccatttggtggcatgagaaaagtgcctggaagcaat gagcccttcatgagtcctggacagctgcccaatagtggaatgcaggatatgtacaatcgt gttccttccggagcgatgtccaacatgggcatgggccagcggcagcagtacccatacgga cctgggtatgacaggaggccagattatgggatgggtcctgaaggcagtatgggacctcct ggtcaaactaacatggtgccttctaacaatgacccgagcctgtactccccaaatcgctac cctgctcaacagaggcacgaatcctacgggcagcagtatccagggcaaggacctccctcg gggcagtcaccatatggaggccatcagcctggaatgtaccctcagcaacagaattataaa cggcatttggatgggatgtatggtcctccagtgaagcgccatcatgaaggagacatgtac aacatgcagtatagcaaccagcagcaggacatgtacaaccagtatggaagcacttactct ggaccagagaggaggcctctgcagggccagtacccctatccctttaacagagagaggatg caaggtccagggcagatgcagcaacacgggatgccaccacagatgatgggaggacctatg cagtcatctgggggggatgtccctcagcagaacatatggcaatcacggaacgacatgcct tacccataccagaataggcaaggccctggaggcccctcgcaggccccacagtattcggcc atgaaccggaacgaagacatgatggtgcctgaccagaggattaaccacgagagccagtgg ccttcgcacatcaaccagcgtcagccttcctacattaccacctcggcctcaatgccgcca atcacacggccgcctcagtcgtcctatcagacgccgccttcgatgccaaaccacatttcc agggcccctagtccggcttccttccagcgttctctggagaaccgcatgtcaccgagcaag tcccccttccttccctcggtgaagatgcagaagggcatgccaccggtcccggcctctcag gtcaccgtgcctccagcccagccaccaccaatacgacgagagatcacgttccccccaggg tctgtagaagcaacaccgccagtcttgaaagcaagacgaaagattacctcaaaagatatc ggtgccccagaggcatggcgagtaatgatgtctctgaaatctggtctcctggctgaaagc acttgggctttggacaccattaatatccttttgtatgacgacagcagtgtttctactttt aacctcactcagttgcctggtttcctagagcttttggttgagtacttcagaaaatgcttg atagacatttttggaatacttaaagagtatgaagttggtgatccaggtcaaaacgcactt ctggacaaagcagccgttaagaaagacgaggagacagagtccaaagcagatgattctggg caggaggacaaagaggatgaggatgagaacagtgaagataatggtgagaacttgcctgaa accatggaaaatggcattgccggtgattctcccaatgcagagcttggcatcatagttgag aagcctaagcaagccagtaagtttgacaagctacctgtaaagattgtgaaaaaggatgac ctctttgtgattgatcggtctgacaaactaggccgggtccaggagttcaacagcgggctg ctccactggcagataggtggaggcgacacaacggagcacatccagactcactttgagagc aaactggaagtacctcctcgcaagcaagtagtttccccaatgggcacccaaaacaaagag aaaaagaaaaaagaggtagagaggatgggccagagcaaaacagagcaactggagaaaagc attatggctaccatcgatgatgttttgtctgctcggcctggggctctgcctgaagatcac tgcagcagcctgtctcttcaaaaagcaaacagcatgtttttatttgagatccaccaagcc aggaaccacagaaacatcaaactggtggaggatgagcctaggagccgtgatgagactcct ttgtgcaccataactgattggcaggactccttgacaaagcgctgtatctgtgtatcaaat attatgcgtagcttgtcctttgtacctggcaatgatacagagatgtccaaacatcctggt ttggtgctcatcttgggaaagctgatcctcctccaccatgagcaccctgagaggaaacgg gcgccacagacatatgaaaaagaagaagaggaggacaagggcattgcatgcagcaaagat gagtggtggtgggactgtcttgaagtcttacgggagaacaccttggtcacattagccaac atttcagggcagctggacctgtctgcctacacagaaagcatctgtttgccaattttggat ggcttgctacactggatggtgtgtccgtctgccgaagcccaggatccttttccaactgtg gggcttaattcggtcttgtcacctcaaagacttgtactggagaccctgtgtaaactcagc atccaagacaataatgtggaccttatattggctactcctcctttcagccgtcaggagaaa ctatatgcgacattggttaggtacgttggggagcgcaaaaaccttgtctgtcgggagatg tccgtagctctcttatcaaaccttgctcaaggggacacattggcagcaagggccatagct gtacagaaaggaagcattggaaacttaattagcttcctggaggatggggtcactatggcc cagttccagcaaagccagcataacctcatgcacatgcaacctccactgctagaaccaccc agtgtggacatgatgtgcagggcagccaaggccttgatggccatggccaaagtggatgaa aatcgctcagagttcttgttgcatgagggtcgcttgctggatatctcaatatcgtctgta ctgaactcttttgttgcatcggtcatttgtgatgtactgtttcagatagggcagttatga

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