Latimeria chalumnae (coelacanth): 102358316
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Entry
102358316 CDS
T02913
Symbol
RHOT1
Name
(RefSeq) ras homolog family member T1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102358316 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcm03029
]
102358316 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcm04031
]
102358316 (RHOT1)
Mitochondrial biogenesis [BR:
lcm03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
102358316 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
102358316 (RHOT1)
GTP-binding proteins [BR:
lcm04031
]
Small (monomeric) G-proteins
Rho Family
Miro
102358316 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
RsgA_GTPase
EF-hand_6
SRPRB
EF-hand_7
EF-hand_1
Arf
MMR_HSR1
AAA_22
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
102358316
NCBI-ProteinID:
XP_014342588
Ensembl:
ENSLACG00000016689
LinkDB
All DBs
Position
Un
AA seq
708 aa
AA seq
DB search
MRKDVRILLVGEPRVGKTSLIMSLVSEEFPDEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLHHEISRANVICIVYAVNSKTSIEKLTSRWIPLISERTDKDSRLPLILVGNKS
DLVEHSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPPCIKALTRIFKISDQDNDGILNDAELNFFQRTCFNTPLAPQALEDVKNVVRKNLSDG
VADNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTHEYLFPLFKIPHDCSTE
LNHHAYLFLQSIFDKHDMDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTSERGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSVLTEQESQISAITVTRDKKIDLQKRQTQRNVFR
CNVIGMKGCGKSGLLQAFLGRNLMRQQLIRADHRSYYAISTTYVYGQEKYLLLHEVVTDS
EFLSASDTACDVVCLVYNVNNPKSFEYCARIFKQYFMDSKIPCLLVAAMSDLHEMKQDYN
ISPADFSKKHKMPPPQSFTCNTVDAPSKDIFVKLTTMAMYPHARLRCMCTCNRCTFCICQ
NFLNSDLLQSVKTKLFTAVLNRLRPHVEDLGAMLLADEESSIIHQVHAVSFVEDSIFMGS
SLDPCLLEERHMTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagacgtaaggattttgctggtgggagagccaagggttgggaaaacctcttta
attatgtcccttgtgagtgaggaattccctgatgaggttcctccacgtgcagaagaaatc
acgatccctgctgacgttactccagaacgagttccgacacacattgtggactactcggaa
gcagaacagagcgatgaacagcttcatcatgaaatatcaagggctaatgttatctgcata
gtatatgcagtcaacagcaagacttctatagaaaagctaacaagtcgatggattcctctc
atcagtgaaagaacggacaaagacagcagattgcctcttatattggttgggaacaaatct
gatcttgttgagcacagtagcatggagactattcttcccatcatgaatcagtatacagaa
attgaaacttgtgtcgagtgctctgcaaaaaacctgaagaatatctctgaactgttttac
tatgcacagaaggctgtattgcaccccactggtccgttgtattgtcctgaggaaaaagag
atgaaacctccctgtataaaagctctgactcgcatcttcaagatttcagaccaggataat
gatggaatcctaaacgatgcagagctaaacttctttcagagaacgtgttttaacacccca
ctagctcctcaggctttggaagatgtaaagaatgtagtacggaaaaacctaagtgatgga
gtggcagataatggattaacgttaaaaggctttctgtttcttcacacgctgtttatccaa
agaggaagacatgagaccacatggactgtactacgtcgctttggctatgatgatgatctg
gagctcacacatgaatatttgtttccactgttcaaaattcctcatgattgttcaactgaa
ttgaaccaccatgcttatttattccttcaaagtatttttgacaagcatgatatggatcgg
gattgtgctttgtcgcctgatgaactcaaagacctgtttaaagtatttccttacatgcca
tggggtcctgatgttaacaacactgtctgcaccagtgagaggggctggatcacataccag
ggctacctttcacagtggacattgactacatacttagatgttcagaggtgccttgagtac
ttgggttacctgggatactctgtacttacagaacaagaatctcaaatttcagctattaca
gttactagagataaaaagatcgaccttcagaagaggcagactcagaggaatgtgtttcgg
tgcaatgtaattggaatgaaaggctgtggaaagagtgggcttctacaggccttcctggga
agaaacctaatgagacaacaactaatcagagctgaccacagatcttattatgcaattagc
actacctatgtatatggacaagaaaaatatttgttgcttcatgaggttgttaccgattca
gaatttctttctgcctctgataccgcctgtgatgttgtttgcctggtttataatgttaac
aatcccaagtcctttgagtattgtgcaagaattttcaagcaatacttcatggatagcaag
ataccctgtctgcttgtagcagcaatgtccgacctgcatgaaatgaagcaggattacaac
atctcaccggctgacttctccaagaagcataaaatgccaccaccgcagtcctttacgtgt
aacactgttgatgccccaagcaaggatatctttgtaaaactgaccacaatggccatgtat
ccccatgcccggttacgctgtatgtgcacctgcaacaggtgtacgttttgcatctgtcag
aacttcctcaactcagacttgctgcaatctgtaaagacaaaactcttcaccgcagttctt
aacaggttaagaccccatgtagaggatttgggtgccatgctgttggcagacgaggagagc
agtatcattcaccaagtgcacgccgtcagctttgttgaagattccatcttcatggggtcc
tctcttgatccctgtttacttgaagaaaggcatatgactcaagcagatttaaagagttcc
actttctggcttcgagcaagttttggtgctactgtctttgctgtcttggggtttgcaatg
tacaaagcattgctgaagcaacggtga
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