Latimeria chalumnae (coelacanth): 102358444
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Entry
102358444 CDS
T02913
Symbol
FREM2
Name
(RefSeq) FRAS1 related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102358444 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lcm04091
]
102358444 (FREM2)
Lectins [BR:
lcm04091
]
C-Type lectins
Lecticans
102358444 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF3377
Syndecan
Motif
Other DBs
NCBI-GeneID:
102358444
NCBI-ProteinID:
XP_006007794
LinkDB
All DBs
Position
Un
AA seq
3126 aa
AA seq
DB search
MAGVVHLFLQQHRIAPLAFATPGKLLLIAAFLTSSIRAETLDSSVLFYGLRSEASEDAIL
IANSGIRVPFGRSVFIDPINDLVIQVQPGDRCTITVLENDPLSQRPGHLLPKKFPCDFGP
NEVKYSHLGSRSPSKDRVKLQLRYDTQTDTLVIPFMMEVEVVFTQLEIVTRNMPLAVEKL
LGNSNPIDGKVLEFTFDKGSELCKITTLVGAGGLPRYGRIINDDRGGQMVDCEEFLKLNI
RYQHTATTKSPNRDYIPMLVELHDKEGNLLKQEYFQIMVRIRQGVENTAPKPSFVAMMMM
EVDQFVMTAITSEMLAAEDAESDPDDLIFNVTSTLSGEQGCIVSTDDQTLPITSFYQRDL
NDLKIAYKPPSADSDVERIFQIELEVIDTEGAASDTFAFMIVVKPMNTLAPVVTRNTGQL
LYEGQSRPLSSSKNLEISDEDNLKDVRVTVIDGLRHGELTIVGSRKKFFTPADLEAGIVV
YQHDGSDTYSDNIIFRMTDGKHEVEFLFPITIVPTDDEPPIINANTGLLLSKNEIVPISA
SVLSATDIDSEDSTITFTIEPPFSVIGEVVLRQSEPPEDPSSWRFIESEEVYEKVASEWF
QRDIVDGKLFYRHVGPHSTTTVMDRFVFRVQDDNDPPNLSGEHTFIVKIQPVDDLPPELY
PGTSLQMIVQEYQLTHFRKKFLRYTDLDSDDRDLKYTIINPPTDTDENNPVQMGFIVLTE
NPNIIVTDFTQAQINHHKIAYKPPDLELGIIPHVVQFQFAVEDTAGNSIEGTFTIFLQPV
DNKPPQITNTGFFVFERGTHIITRAELDATDADTNGNQMSFTLVRPPNHGEVQYSGETMY
VGETFSIEDISSGKIAYIHNGDESTNDLFNVDVSDGVHVVSITVRITVSPVDDEVPTIML
PAGTIGSYLDVLENSATEITTNVIQGTDVDTDDLMLTFIVEDTPQFGEILVEGVPADSFS
QRDIIDGAVVYAHTSGEIGLEKKEDSFNLTLSDLSDEWSVGGNKVQGVRVQVTILPVDSQ
APEVTVGEQFIVVEGDKNTITPDHISAKDVDTQNDIILCTIIVQPTSGYVENIAPAPGSE
KSRSGTAISAFTIKDVRLGHINYVQSIHKGVEPVEDRFTFRCSDGINFSERYFFPIVIIP
ANDEKPELFLREFVVMEGMGLNIDTPILNAADSDIPADDLMFIIIKPPKHGQIVNQLSTG
TVPVHNFTLDEIKEGSTIMYEHDDSEIKEDSFDIQLTDGKHIVEKTVLIMVITVDDETPR
MTINDGLEIEIGETKIINNKILKATDLDSEDKTLTYVIRYGPGQGLLQRRRLSGGAENIT
IGMNFTQDEVDKNLIQYVHIGQEGIRDLIKFDVTDGINPLIDRYFYVSIGNIDMIFPDVI
SKGVSLKEGGRVTLTTDLLSTSDLNSPDEHLVFSITRAPSRGHLECTDHPGVPITTFTQL
QLAGNKVYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTVHDLVVNE
GENKLITPFELTVEDRDTPDRLLKFTVTQVPVHGQLLFNSTRPVTSFTKQDLNENLISYR
HDATESTEDSFSFTVTDGTHTDFYVFPDTVFETRKPQMMTIRIMSVDNGVPQIVVNKGAP
TLRVLTTGHLGFLITSKALKAEDRDSPHTSLKFKITEIPQHGFLIHLGKGNESITGFTQA
DIDDMKICYVLREGDNATSDIFYFTVEDSGGNKLKNQLFRLNWAWISLEKEYYIVDENSK
FLEIVLKRRGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILTDR
EYEQSENFQIVLSEPVMAALEFPEVTTVEIVDPGDESTVFIPQSTYAIEEDIGELLIPIR
RSGDASQELMVLCYTHQGTATGTLPTTVLSYSDYISRPEDHNSVIRFDKDETEKFCRVVI
IDDSLYEEAESFNVTLSMPMGGRIGAEYPAAQITILPDTDDEPAFYFGDTEYYVDESAGY
VEVRVWRTGTDLSKTATVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVNMQTLRVTILD
DLGQPVLEGLEMFELVLRMPMNAVLGEPSKVTVTINDSVSDLPKVQFKEPMYMGNEDDGE
ITAIVYRSGDISYKSTVRCYTRQGSAQVMMDYQERPNIDESIITFLPGEIEKPCTVTLMD
DSIHEEDEELRLVLGTPRSESPFGASIGEQNETLIKIKDDADKAIIKFGETKFSVSEPKE
PGQITVIKIPVLRLGDTSKVSIVRVHTKDGSATSGVDYNPVSEEIEFKEGETQHLVEVEV
LYDGAREMREAFTIHLKPDENMVAETQMSKAIVYIEEMNSMADVTFPSVPQVVSLLLYDD
TFKAKDNPNPLAGYPVVCVTACNPKYSDFDKTGSICSSENINDTLTWYRWLVSAPTGPDG
VTSPMREVDFDTFFTSSKMITLDSIYFQSGSRVQCAARAVNSNGDEGLELMSPIAVVSRD
DGLCQPRVQGGVGAEPFSAKLRYTGPEDPDHPNLIKLTVTMPHIDGMLPVISTRELSNFE
LTLSPDGTRVGNHKCSNLLDFNEVKTRYGFLTDATKNPEVIGETSPYQYSSSLRGSSTLR
FYRNLNLEACLWEFISYYDMSELLTDCSGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSP
VGIGGWQHFDLQSELRLTFVYDTAILWNDGIGSPPESELQGSLYPTSMRINEEGRLVVNF
RTEARFRGLFVMSHPASSLTSMIMSADHPGLTFTISLVRSEPTYNQPMQQWSFISDFAVR
DYSGTYTVKLIPCTTAPHQEHSIPLVCNPREPITFDLDIRFQQVSDPVAAEFSLNTQMFL
LSKKALWLSDGSMGFGQESDVAFTEGDLIYARVMVDPVQNLGDSFICNIEKVFLCTGADG
YVPKYNPSNTEYGCLADSPSLLYRFKVLDKAQPETQDTHFGNVLFAAKLAADDSEALPLV
RQPGSDGFRLDSTALFQVSSGREWYIHTIYTVRSRENANRGIGKRSVDSLYHSIIHNGNL
DALQQSRHKREVKEAPALTKEIGLESNRGTNIQHIALDRTNRKQVPSQDVFPDGIIPREL
NDKESEVNVVMIVGGLAALLLAICVIIILILFLKRKQNSKKKDACKGSPSSEPMMSHSYN
DDSSEV
NT seq
9381 nt
NT seq
+upstream
nt +downstream
nt
atggctggagttgtacaccttttcctgcagcagcacagaattgcacctttggctttcgca
actcctgggaaacttttgctgatagcggcatttttgacaagtagcattcgggcagagact
cttgacagctctgtgttattttatgggcttaggtccgaggcatcagaagatgccatattg
atagccaatagtggaatcagggtgcctttcggaagatctgtctttattgaccctataaat
gatttggtgattcaagttcagcctggggacagatgcaccattacagtcctggagaatgat
cccttatcccagagaccgggtcacctgctacctaagaagttcccctgtgactttggtccc
aatgaggtcaagtattctcatttggggtccagaagtccttccaaggacagagtgaaactg
caactcaggtatgacactcaaaccgatactcttgtgattccttttatgatggaagttgag
gtggtctttactcagttagaaattgtcaccagaaacatgcctctagctgtggaaaaactt
cttggtaatagtaatccaattgatgggaaagtcttggaatttacgtttgataaaggttca
gaactttgtaaaattactacgttggtgggcgctggtggtctcccaaggtatggaagaatt
atcaatgatgacagagggggccagatggtggattgtgaggagtttctaaagttaaatata
cggtaccagcatacagctacgactaaatcgcccaacagagactacatacctatgctagta
gaattacatgacaaagagggcaaccttcttaaacaggaatattttcagatcatggttcgt
atcagacaaggggttgaaaacaccgcgcctaagccaagttttgttgctatgatgatgatg
gaagtagatcagtttgttatgactgctatcacctctgaaatgctagcagctgaagatgca
gagtctgatcccgatgatttaatttttaacgtaacctccactctttctggagagcaaggt
tgcattgtaagcacggatgaccaaacgctgcccataacgtctttctaccaaagagatctc
aatgatttgaaaatagcctacaagcccccatctgctgattcggatgtggagagaatcttt
cagatagagcttgaagttattgatactgaaggagctgcctctgatacatttgcctttatg
attgtcgtaaaacccatgaatacacttgctcctgtggtgactcgaaacactggccagctg
ttatatgaaggtcaatccaggccactatctagttcaaagaatctggagatcagtgacgaa
gacaacctgaaggatgtcagagtcaccgtaattgatggactcagacacggggagctaaca
atagtgggatcacgaaaaaagttcttcacaccagctgacctggaagcaggtatagttgtt
taccaacacgatggtagtgatacatacagtgacaacatcatctttagaatgacggatggt
aagcatgaggtcgaattccttttcccaattaccattgtaccaactgatgatgaacctcca
ataattaatgccaatactggactactgctgtctaaaaacgagattgtcccaatttcagct
tctgtgcttagtgccacagatattgattctgaagactccactataacgtttacaattgag
ccccctttctcggttattggagaggttgtactccgtcagtccgaacccccggaagacccc
tcatcttggaggttcatagaaagcgaagaagtatatgaaaaagtggcatcggaatggttc
caacgggatatagttgatgggaagttattttataggcatgttggacctcatagtaccact
acggttatggatcggtttgtctttagagttcaagacgacaacgaccctcctaatctgtca
ggtgagcacacttttattgtcaaaattcaaccagtggatgatcttcctcctgagttatac
cctggcacctccttacaaatgatcgtgcaagagtaccaactcacccattttaggaaaaag
tttctacgctacactgacttagattcggatgacagagacttaaagtacactataattaat
ccaccgactgatacggatgaaaataatcctgtccaaatgggttttatagttttgactgaa
aaccccaacatcatagtgactgattttacccaagctcagatcaatcatcacaaaattgct
tacaaaccccccgatttggaacttgggatcataccccatgtagttcagttccagtttgca
gtagaggatactgctgggaacagcattgaaggtacatttacaatctttctgcagcctgtt
gacaacaagccacctcagatcactaacactggattttttgtttttgaaagaggcacgcat
atcatcacaagggcagaacttgatgctactgatgcagacactaatggaaaccagatgtcc
tttacactcgtgaggcccccaaaccacggagaggtgcagtattctggggagaccatgtat
gtgggagaaacattctctatagaggacataagtagtggcaaaatcgcctacattcataac
ggtgatgaatccaccaatgacttatttaatgtggatgtaagtgatggcgtacatgttgtc
tccataactgttagaattacagtaagtcctgtggatgatgaagtaccaactattatgctg
ccagctggcacaatcgggtcctacttggatgtcttagaaaacagtgccactgaaatcacg
actaacgttatccagggcacagatgtagacacagatgaccttatgctgacatttattgtg
gaggatacacctcagtttggagaaatcttagttgagggtgtgccagctgacagtttttcc
cagagggacatcattgatggtgctgttgtttatgctcacaccagtggggaaattgggctt
gagaagaaagaggatagttttaacctgacgctgtcagacctttccgatgaatggagcgtt
ggaggcaacaaggtccagggagtaagagtgcaagtgacaatccttccagttgacagccag
gcccccgaagtcactgtaggcgagcagttcattgtggttgaaggtgataaaaatacaatt
acgccggatcacataagtgcaaaagatgttgacacgcagaatgatattatcctttgcact
attattgtccagccaacttctggttatgtggagaacattgctccggccccgggatctgaa
aaatcccgatcaggtacagctataagtgcatttactataaaagatgtcagacttggacat
atcaattatgtccaaagcattcataaaggtgtcgagccggtagaagacagatttacattc
cgttgttctgatggcattaacttttcagagagatatttctttcccatcgtgattatcccc
gccaatgacgaaaagccagaattatttttaagggaatttgtggtgatggagggtatgggc
cttaatattgacactccaattcttaatgctgcagactcagacattcctgctgatgattta
atgttcatcattattaaaccaccgaagcatggtcagatagtaaatcagctgtcaacaggt
actgttccagttcataacttcaccctggacgaaatcaaagagggatctactattatgtat
gaacacgatgactctgagataaaggaggacagttttgatattcagcttacagatgggaaa
catattgttgaaaagacggtgcttattatggttattactgttgacgatgaaacgccaagg
atgactatcaatgacggactggaaattgaaattggagagaccaaaattattaacaacaaa
attttaaaagctacagatttagactctgaagacaaaactttgacttacgttattcgctat
ggaccagggcaaggactcttgcagagaagacgactttcaggtggggctgagaatattaca
atagggatgaactttactcaggacgaagtggacaaaaatcttatacagtatgtgcatatt
ggacaggaggggattcgagaccttatcaaatttgatgtcacagatggcatcaatcctctt
attgatcgctatttttatgtttcaatcggcaacattgatatgatcttccctgatgtgatt
agcaaaggcgtgtctttaaaagagggtggaagggtgacccttactactgacttacttagt
accagtgacctaaacagccccgatgagcaccttgtttttagcattactagggctcccagt
cgaggacatctggaatgcacagaccatccaggggtgccaataacaaccttcactcagctt
cagttagctggaaataaagtttactacattcatacttctgatgatgaggtgaagatggac
agctttgagtttgaagtaactgatggctacaaccctgttttccgtacttttagagtttcg
atcacggacgtggacaacaagaaaccggttcttacagtgcacgatcttgtggtcaatgaa
ggtgaaaataagctaatcaccccattcgagttgactgtcgaggacagagacacgcctgat
cgtttgctgaaattcacagtgacacaagtacctgttcatggtcagctgctgttcaatagc
acacgacctgtgacatctttcacaaagcaggatctcaacgaaaatctgatcagctacaga
cacgacgcgacagagtctacagaggacagcttttcttttactgtaacggatggcacgcat
actgatttttatgtgtttccagatactgtgtttgaaacaagaaaaccacaaatgatgaca
attcgaataatgtcagtagataacggggtgccacagatcgtagtaaacaaaggtgcccca
actctacgcgtactcaccacgggccaccttggttttctgatcacaagtaaggccctgaaa
gctgaggacagggacagcccccacacatctctaaagtttaagatcaccgagattcctcaa
catggttttcttattcacttgggcaaaggcaatgagagcatcacaggatttacccaagct
gatattgatgacatgaagatatgttatgtactacgagaaggggacaatgccacaagtgac
atcttctactttacagttgaagacagtggaggcaataaactgaagaaccagctcttccgt
ctgaactgggcctggatctctttagaaaaggaatactacatagtagatgagaactccaag
tttctggagattgttctgaagcgtagaggttacctgggagaaacctcttttgtcagcatt
ggcactaaggatggcactgctgagaaagataaagatttcagggggaaagcacagaagcag
gtgcagttcaacccaggccaaaccactgccacctggaaagtgcgaatcctgacagaccgt
gaatatgagcagtcagaaaatttccagattgtactgtctgagcctgtcatggctgccctt
gaattcccagaagtgaccactgtggaaattgtggacccgggtgacgaatctactgtgttt
attccacaatctacctatgccatagaagaagacatcggtgaactgttgataccaatcaga
aggagtggagatgcaagccaggaactcatggttctctgttatactcatcaaggaacggct
actggcactcttccaaccacagtgctgtcctactctgactacatttctaggccggaggac
cacaacagcgtcatccgcttcgacaaagatgagactgagaagttctgccgcgtcgttatc
atcgacgactcgctgtacgaagaagccgagtccttcaatgtcacactgagcatgcccatg
ggtggaagaatcggtgccgagtaccctgctgctcagattacgatcctgcctgacaccgat
gacgaaccagctttctactttggagatactgaatattatgttgatgagagtgccggctat
gttgaagttcgtgtctggagaacaggaactgacctgtccaagaccgctacagtcacagtt
agatctcgtaaaactgatccagtatcagctgaggctggtgttgactatgtgggtattagt
cgaaacttggattttgcacctggagtcaacatgcagaccctccgggtgactatcttggat
gacttaggccagccagtcctggagggtcttgagatgtttgaacttgtcctacgtatgcca
atgaatgccgttcttggagagccaagcaaagttacagttacgatcaatgactcagtctct
gacttgccaaaggtacagtttaaagaaccaatgtacatgggtaatgaagatgatggagag
atcactgcaattgtgtacagaagtggagatatcagttataaatcaacagtgcgctgctac
actcgccagggctcagcacaagtcatgatggactaccaagagagacccaacattgatgaa
tccatcatcactttcctcccaggtgaaattgaaaaaccatgtactgttacacttatggat
gatagtatccacgaggaagatgaagagctgcgattggtcctaggaacaccgagaagcgaa
tctccatttggtgcttccattggtgaacaaaatgagacgctgatcaaaatcaaagatgat
gcagacaaggccatcattaagtttggagaaaccaagtttagtgttagtgagccaaaagaa
ccaggacagatcacagttataaaaatcccagttcttcgccttggagacacttcaaaggtt
tctattgtgagagttcatacaaaggatggctctgccacttctggagtagactacaaccca
gtgtctgaagaaattgaatttaaggaaggtgaaactcagcacttagtggaagtggaggtc
ctgtatgatggagcgagagagatgagggaggcgtttaccatacatctgaagccagatgag
aacatggtggcagagacacagatgagcaaggcaattgtgtatattgaggagatgaatagc
atggctgatgtcacattcccatctgtgccacaagttgtgtctcttctcttgtatgatgat
acatttaaagctaaagacaaccccaacccacttgctggctatcctgtcgtctgtgtcact
gcttgcaaccctaaatattctgactttgataagacaggctcaatctgctccagtgaaaac
attaatgacaccctaacatggtatcgctggctggtcagtgctcctacagggcccgatggt
gtgaccagccccatgagagaggtagactttgacactttcttcacttcctccaagatgatc
acactggactccatttacttccagtctggctctcgtgtgcagtgtgctgcccgtgctgtc
aattctaatggggatgaaggcctggagctaatgagcccaattgcagttgttagcagagat
gacggtttgtgccagcctcgagtccaaggaggggtcggtgcagagccattctcagccaag
ttgcgctatactggacctgaagacccagatcatccaaatctcattaaactcacagtcact
atgccacacattgatggcatgcttcctgttatctccacaagagagctgtccaactttgag
ctaactctcagccccgatggaacccgggttggaaaccacaagtgctccaacctccttgat
tttaatgaagtaaagacccgctatggatttctgaccgacgccaccaagaacccagaggtg
atcggagagacctccccttaccagtacagctcttccctgaggggttcaagcaccctgcgc
ttctacaggaaccttaacctggaggcctgtctatgggagtttatcagctactatgacatg
tccgagctgcttactgattgtagtgggactataggcacagatggacaggtgctgaatctt
gtacaatcctatgtcactttgcgagttccactatacgtgtcctatgtcttccactctcca
gtgggtatagggggctggcaacactttgacctacagtcagagctccggttgacctttgtg
tatgatactgccatcttgtggaatgatggaattggcagcccaccagagtctgagttgcaa
ggttccttgtacccaactagtatgcgcatcaatgaggaagggcgcctagttgtcaacttc
aggacagaggctcggttccgtggcctgtttgtgatgtcacatcctgcatcctctctgaca
tcaatgattatgtcagctgaccatccaggcctcactttcaccatcagcctcgtaagaagc
gagccaacgtataaccagccaatgcaacagtggagctttatttccgattttgcagtgcgt
gactactctggaacatatactgtaaagctgattccatgtactactgctcctcaccaggaa
cacagcataccattggtctgtaatcctagagagccaatcacatttgaccttgatatcagg
ttccaacaggtaagtgacccagtggctgctgagtttagcctgaatacccaaatgttcttg
ctgtccaagaaggcactctggctctctgatggatccatgggatttggacaggaaagtgat
gttgcttttacagaaggtgatctcatttatgcacgtgtgatggtggaccccgtacagaac
ctgggagactctttcatttgcaatattgagaaggttttcctttgtactggagctgatgga
tatgttccgaagtataacccatccaatacagagtacggctgcttagcagattcgccatcc
ctgttgtacaggttcaaggtcctggataaagctcaacccgagactcaggacacgcatttt
ggaaatgtgctcttcgctgctaagcttgctgcagatgactcagaagcgctgcctctcgta
cgacagcctggttccgatggattcagattagactccactgcactattccaggtttcttca
gggcgtgagtggtatatccacactatttatactgtgcgatcaagagaaaatgctaacaga
ggtattggtaagagaagcgtggactccctgtatcactctattatacataatggaaatctt
gatgccctgcaacagtctcgtcataaaagagaagttaaagaagcaccagcactcactaag
gaaattggtcttgagagcaacagaggaaccaacattcaacacatagctttggatcgtact
aacaggaaacaagttccttcacaagatgtctttccagatggaattatccccagagaactt
aatgacaaggaatcagaggtcaatgttgtcatgattgttgggggacttgctgccttgcta
cttgccatctgtgtgatcataatacttattcttttcttgaagcgcaaacaaaattccaag
aaaaaagacgcttgtaaaggatctcctagcagtgaaccaatgatgtcacatagttataat
gatgacagctcagaggtttga
DBGET
integrated database retrieval system
