Latimeria chalumnae (coelacanth): 102358696
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Entry
102358696 CDS
T02913
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102358696
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102358696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
PKD_channel
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
102358696
NCBI-ProteinID:
XP_006003125
Ensembl:
ENSLACG00000005255
LinkDB
All DBs
Position
Un
AA seq
894 aa
AA seq
DB search
MVCAPSRTQVFPVLFFLSKQDANWREIVNKKMKFPIALISAIQDGNLLHVRQLVQSNDGI
LRQLDETEDRSWREALNLAIRMGKTDIVSALLQYVKFDFRQIHEALLVAVDTNQPLVVKS
LLDRLDQEKSMKVDIKSFSLAIFDNSIDNSRYAPGVTPLTLACQKDLYEIVDMLMKKGHD
ISAPHKISCTCLECSNARQYDLLKFSLSRINTYKGIASRAYLSIASEDAMLRAFKLSREL
KRLSNKEPEFKPEYLALEELCQDFAVELLGMCRNQSEVTAVLNDSGDDTEDLDNQAFEEG
IPNLSRLRLAVNYNQKRFVAHPICQQVLSSIWCQSLSSWRGSRTTWKLFIAFGAFITMPL
LCLMYWLAPKSKVGKTLKIPVIKFILHSASYLWFLVFLLVESIIMEQNREAFSSRNQTIY
ENSFHMVWVIGFFWYECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFSLRVLVALKGYL
YCLYWPMSSDCYYFTKAEREEWRTEDPQFIAEVLFAVTSMLSFTRLASILPAHESLGTLQ
ISIGKMIDDMMRFMFILMIIGTAFLCGLNNIYVHYPEFERLGQLNETFQFLFWTMFGMEE
HSVVDMPQFMVAELVGRILYGIFTMVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSK
LYLGYFREGLTLPVPFNIIPTPKAVFYMIRKIFRVFCCAKEKKRYSDYPPIPSLVSISSR
TGNGGEANRTSYRLQVIKALVQRYIDTARREFEEGRRKDLGNRITELNKAVVRLHTEVKQ
LRRNVMESRASSKPDGASILGKYILGAKNKFRDYDQDSVASTSSRTNNEHSQVTVHQQDG
NDTQVQPAEKQEEEKEEEPVEEEEEEELEDISPTDSKTSEGTDTGIGTEDENNE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcgctccatccagaactcaagtctttcctgttttattttttctttccaaacag
gatgccaactggcgggagattgtgaataagaagatgaaattccccatcgctctgatcagt
gccatccaggatgggaacctgttgcacgtgcgccagctcgtgcagagcaatgatgggatc
ctgcgccagctggacgagaccgaggaccgctcctggagggaggccctcaacctggccatc
cgcatgggcaagacggacatcgtgtcggccctgctgcagtacgtcaagtttgacttccgc
cagatccacgaggcgctgctggtcgctgtggacaccaaccagcccctggtggtcaagtcg
ctgctcgaccgactggaccaggagaagagcatgaaggtggacatcaagtctttctcactg
gccatctttgacaactccatcgataactcgcgttacgcccccggggtgacaccgctcacc
ctggcctgccagaaggacttgtacgagatcgtggacatgttgatgaagaagggccacgat
atctccgcaccccacaagatctcctgcacctgcctggagtgtagcaatgcccgccagtat
gatctgctcaagttctcactgtcccgcatcaacacctacaaaggtattgccagccgggcg
tacctgtccatcgccagcgaagacgccatgctgagggccttcaagctcagcagggaactc
aagcggctgtccaataaagagcctgagtttaagccggaatatctggctctggaggaactg
tgtcaggattttgccgtggagctattgggaatgtgtcggaatcagagcgaggtgacagcg
gtgctgaacgacagtggtgatgacacggaggacctggacaaccaagcctttgaggaaggg
attcccaacctctcccggctccgcctggcagtgaactacaatcagaaaaggtttgtagcc
catcctatctgccagcaagtgctgtcgtcaatttggtgtcagagcttgtcgagctggaga
ggcagtaggactacctggaaactcttcattgcctttggggcctttatcaccatgcccctt
ctctgcctgatgtactggctggcgcccaaatccaaggttggaaagaccctcaagattccc
gtcatcaagttcattctgcactcagcctcttacctctggtttctcgtcttcctcctggtg
gagtccataatcatggagcagaaccgggaggctttctcgtctcgcaaccagacaatttat
gaaaactcctttcacatggtctgggtcatcggtttcttctggtacgagtgtaaggaggtg
tggatagaggggctgcgtagttacctgctggactggtggaacttcctggatatcgtgatc
ctcagtatgtaccttgcctccttctccctgcgagtgctggtggccctgaagggttacctc
tactgcttatactggccaatgtccagtgattgctactatttcaccaaggctgagagggaa
gagtggcggacagaggacccgcagttcattgcggaggtgctcttcgctgtgaccagcatg
ctgagcttcacgcggctcgcctccatccttcctgctcacgagtcgcttgggacgctgcag
atctctatcggcaagatgatcgatgacatgatgagattcatgttcatcctgatgatcatc
ggaacagccttcctctgcggactcaacaacatctatgttcactaccctgaatttgaaaga
ctgggccaattaaatgagaccttccagttcctcttctggaccatgtttggcatggaggag
cacagcgtggtagacatgcctcagttcatggtggcggagctcgtgggcaggatcctgtat
ggcatcttcaccatggtcatggtcattgttctcctcaacatgttgattgccatgatcacc
aactcctttcagaagatcgaggatgatgcagatgtagaatggaagtttgcccgttccaag
ctgtacctgggctatttccgagagggtctcaccttgcctgtcccattcaacatcatccct
actcccaaagcagtcttctatatgattaggaaaattttccgcgttttttgttgtgcgaag
gaaaaaaagcgttactccgattaccctcccattccatcacttgtaagtatttcatcaagg
acaggcaacggaggtgaggcaaaccggacctcctatcggttacaggtgattaaagcgctg
gtgcagaggtacatcgacacggccaggagagagttcgaggagggcagaagaaaagatctg
ggtaaccgcatcacagagctgaacaaagcagtggtccgtctccacactgaagtcaaacag
ctgcgtcggaatgtgatggagagtcgtgccagttccaaacctgatggtgccagcatccta
ggcaagtacatcttgggggccaagaacaagttccgtgactacgaccaggattcggtggcc
tccaccagttcaaggaccaacaacgagcactctcaggtcacggtgcaccagcaggatggg
aatgacacgcaagtgcagccagcagagaagcaagaggaggaaaaggaggaggagccagtg
gaggaggaggaggaggaagaactggaggacatttcacccacggacagcaaaacttcagaa
ggcacagacacaggaattgggacagaagatgaaaataatgaatga
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