KEGG   Latimeria chalumnae (coelacanth): 102359086
Entry
102359086         CDS       T02913                                 
Symbol
PARP4
Name
(RefSeq) poly(ADP-ribose) polymerase family member 4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03410  Base excision repair
lcm04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102359086 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102359086 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102359086 (PARP4)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102359086 (PARP4)
SSDB
Motif
Pfam: PARP VWA_3 BRCT_2 BRCT VWA VWA_2 PARP_reg PTCB-BRCT VWA_CoxE VIT BRCT_3
Other DBs
NCBI-GeneID: 102359086
NCBI-ProteinID: XP_006006748
Ensembl: ENSLACG00000005075
LinkDB
Position
Un
AA seq 1670 aa
MEIFRNWVLFLELKTLPIKEKSKLKQLIKENGGTISYVINQKCTHVIGNDCDTLSPWLLK
KIQKYEIPVLSVKYVLKCIEEGRVLETQCCIPAHASKDFSEPSESRPVFTDEVKNCCAEE
SLEELFAGKLRIYNDSDSDIPPFPEDFEVAKYSLFEKSFENETEKAAVVELQCSQQDSSF
LFRISGHLGLGLQSGLQVQKKQFLFASTSEDAVDAYEIYIQELLEEDFELKEHFPLGGHY
LISSQLQKVLFEESLNVRNISQEVGVFVETIWREAHGCLEDVLLCPVNSISPNDVSRAEG
VLLQLRRAIDDGANPAVLKDIMSEFYRLIPHKKGKDHTLNKKILSAKQDLCQLIRDVVNA
HEATMGSTLPSSLFKYRALQCHIQHVEPSSDEFLQVKNLVLESSHSDSPIEVLKIFQVAR
VNESVEFQSKLGTVLQLFHASAVSNFVGILSRGLLLPKIVVEDHGVERTDIGNLGSGIYF
SDSVSISIKYSKPSATDGTRLLLVCDVALGTCKELSQKIFSLTSAPKGFHSVHGVHRTEK
KLSDFEDDEFVVYNTNQLRIKYVVQFLVDGDQKKPFQPSVNISTKQMNTPLPDAMPKYDP
DTLSYENLIEGCKHPLEDKAGLQDNSGNCIPLEEVHMKGRILDFTAQDVFTVSVGNLPPN
ATVLIKITYITELSVNWHNIEFFLPGTVAPWQQDKALNENTQETVEKVCINTPQECAFSA
EMSIEMPYPISDIYSWTHKIKIKKTDCKAVVCTEKGSSLSKGGLYLQLFVADIFQPRLWI
EKHPDKDSEACMAVFFPSHGLSTPENESSAEMIICLDCSNSMMGLALQQAQKIAAFFLHT
CCSIYRINVITFGTDYKELFQFSRHVDDPWAASQKFIQSATAIMGNSDFWKPLYRLNLLP
PSKGFRNILLISDGHLQNESLTFQLIKKNVKHTRIFTCGVGSTANRHLLRSLARYGGGTY
EFFDEKTKYNWLEKINLQKKRMISLGCTSVSVKWQQFSRNAPEPIQAPNQIRSLFDNDRL
LLYGFAARCTQVALHGMLNEKEIQTMVSTTELQKTKGTMLHKLTARAIIRDYEHGSLHED
ETEHEMKKALLKSLIIKLSKEYSIITQFTSFVAIEKRGTEEAEDPGAPNIEELIAKDDVD
ILQYMDWREETDEAVETLQVEKDKLESQETSLNKCDLGNSLESFTMEDFCFDGSVSDILQ
GECTDAVDFSDSQSLHICASSSNVEKNFHIQYKLPESVLPPPPFHLAEPQFSVFSNSHWL
EAGICIAEGPLTPSGICPVDLSFSRQSSVAPVEQVSKSISFASSAPIQPAFGTVCNLFAF
PSSAPTRPVIGSSSFSFSSPMQLPFGTGSSGFGSSAPTQPMGGTGSFGFASPVPKQPVAD
SGLFGFSAARRLGRGTDSLQLGFSGPAQMASGSDFVRLSAPVQPDIETVPLVFGSKQLVD
ESGLFHSASTQPVSGDGSVGIVSYQLAKKCVPHFSPKLKKRGCLKSPFSVKLLQEASLQL
EAENIKIISVRTKNCLIPWTQLFQLQSQDGYWQLSQELGLILELDEDYLINVFLKQKGIQ
SLGLKGKENLLQLIATLLVLQLIHFTQQLEGIVLKSLLKLDEPTKSSTIHWAFNSVKKAV
KWAKNVDGQYSAICNRLQLGRDWESATRQLLRIDPIKASSPLYRIISRGG
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggagatcttcaggaactgggtgctgtttttggaactgaagaccttacctataaaagag
aaaagcaagttaaagcagcttattaaagagaatggtggcacaatttcctatgtgatcaat
caaaagtgtactcatgtcattggaaacgattgtgatacactaagcccttggctgctgaaa
aagatacaaaaatatgaaattccggtgttgagtgttaagtatgtattgaagtgcattgaa
gagggacgtgtcttagagacgcagtgctgcattcctgcacatgcatcaaaagatttttct
gaaccaagtgaaagcagaccagtttttacagatgaagtgaaaaactgctgtgctgaagaa
agcttagaggaactgttcgcagggaagctgagaatttataatgatagtgattcagatatc
cccccatttcctgaagattttgaagtggcaaagtacagtttgtttgaaaagtcctttgaa
aatgaaactgagaaagcagcagttgttgaactgcagtgttcccagcaagattccagcttt
ttgtttcggatatctgggcacttgggtctaggtctgcaaagtgggcttcaggtgcagaag
aaacagtttttatttgccagcacttctgaagacgcagtagacgcctatgagatatacatt
caagagctgttggaagaagattttgaactgaaagagcattttccattgggaggacactat
ttaatctcaagccagctacaaaaggtactctttgaggaatccttaaatgtaagaaacatt
tctcaggaagttggagtttttgtggaaacaatttggagagaagcacatggctgcctggaa
gatgtactgctttgtcctgttaatagcattagtcctaatgatgtaagcagagctgaaggt
gttctcctgcagttaagaagagctattgatgatggagcaaatccagcagtgctgaaagat
ataatgagtgaattctatcgacttatacctcataagaagggaaaagaccacacactcaac
aaaaagattttgtctgcaaaacaagatctgtgtcagttaattagagacgtagttaatgca
catgaagccaccatggggagtactttgccatcctctctgtttaaatatcgtgctctgcaa
tgtcatattcaacatgttgaaccaagcagtgatgagttcttgcaagtcaaaaacttggta
ttggagagcagtcacagtgactctccgatagaagttctaaagatctttcaagttgctaga
gtaaatgaatctgtagagtttcagagcaagcttggcactgtactgcaattatttcatgcc
tccgccgtcagcaactttgttggtattttatcacgaggtttacttttacccaaaattgtg
gttgaagatcatggcgttgaaagaacagatattggaaacctcggtagtggtatctatttc
agtgattctgtcagcataagcatcaaatactcaaagcccagtgcaacagatggcacccga
ctcttgttagtttgtgatgtggcacttggaacctgcaaagaactgtctcagaaaattttt
tctttaacctctgcaccaaaaggatttcacagtgtccatggagttcacagaactgaaaaa
aagctctctgattttgaggacgatgagtttgttgtatacaacaccaatcagttgagaata
aagtacgttgttcagttccttgtggatggagaccagaagaaaccatttcaaccttctgta
aatatttctactaagcaaatgaacactcctttgcctgatgcaatgcctaaatatgatcca
gataccttaagctacgaaaacctcatagaagggtgcaaacaccctttggaagataaggct
ggtctacaagacaactctggcaactgtatcccacttgaggaagttcatatgaagggaaga
atactagattttacagcgcaggatgtttttacagtcagtgttggaaatctcccaccaaat
gccactgttctgatcaaaatcacttacattactgaactgagcgttaattggcacaacatt
gaattctttctgcctggcactgtggctccatggcaacaagacaaagcgttaaatgagaat
acacaggagacagtagaaaaagtttgtattaatacacctcaggaatgtgcattttctgct
gaaatgtctattgagatgccatatccaataagtgacatttatagttggactcacaagatt
aaaattaagaaaactgactgcaaagctgtggtatgcactgaaaagggcagttctttaagt
aaaggtggtctgtacttgcagctgtttgtggccgatatcttccagccaagactgtggata
gaaaagcatccagacaaagacagtgaggcatgtatggcagtgttttttccatcacatggt
ttaagtactccagaaaatgagagttctgcagagatgattatttgtttggattgttcgaat
tctatgatgggtttagcgctacaacaagcccaaaaaattgctgcttttttcctacatact
tgttgcagtatttatagaatcaatgtcatcacctttggcacagattacaaggagttgttt
cagttttcaagacacgttgatgatccatgggctgcttctcagaaatttattcagtctgca
acagccataatggggaactcagatttttggaaaccattatacaggctgaacctgctgcct
ccatccaagggattccgtaatatacttctgatttctgacgggcaccttcaaaatgaaagt
cttactttccagctcataaagaagaatgttaaacataccaggatatttacatgtggggta
ggttcaacagccaaccggcacttgttaaggtccttggcccgctatggtggaggaacatat
gaattttttgatgagaaaacaaagtataactggcttgaaaagatcaatttacagaagaaa
agaatgatatcgttagggtgtacttcagtttctgtcaaatggcagcagtttagtcgaaat
gccccagaacctatccaagcacccaaccagatacgatctctctttgataatgacagactt
ctgctgtatggatttgctgctcgatgtactcaggttgcacttcatggtatgcttaatgag
aaagagatacaaaccatggtgtcaactactgaactacagaagactaaagggacgatgctg
cacaagcttacagctagagcaatcattagagattatgagcatggcagtctgcatgaggat
gaaacggaacatgagatgaagaaggcgttgttgaagtcattaattattaaactcagcaag
gagtattctatcattactcaattcaccagttttgtggctattgagaaaaggggaactgaa
gaggctgaagaccctggcgctccaaatattgaggaacttatagctaaagatgacgtagat
attctgcagtacatggactggagagaagaaactgatgaagcagtggagacactacaagtt
gaaaaggataaactagaaagccaggaaacgtctcttaataaatgtgatttggggaatagt
ttggagagctttacaatggaagacttctgctttgatggctctgtttctgatatactacaa
ggggaatgtacagatgcagttgatttttctgactctcaaagtctacatatatgtgcttca
tcttctaatgtggaaaagaattttcatatccaatataaacttcctgagtctgttttaccc
cctccaccttttcaccttgcggaacctcagttttcagttttctctaacagtcattggcta
gaagctggaatctgtattgcagaaggtcctctcacaccctcaggaatctgtccagtagat
ttaagcttttcaaggcaatcttctgttgctccagtagagcaagttagcaaaagtatttca
tttgcttcttctgctccaatacagccagcctttggaactgtatgtaatttatttgcattt
ccgtcctctgctccaacacggccggtcattggaagcagttcattcagtttctcctctcca
atgcagctgcctttcggaactggttcatctggatttgggtcctctgctccaacacagccc
atgggtggaactggttcatttggatttgcatcccctgttccaaaacagccagttgctgat
agtggtttatttggattttctgctgcaagacggctgggtagagggactgattcgcttcaa
cttgggttctctggtccagcacagatggccagtggaagtgatttcgtcagactttctgct
ccagtacaacctgacattgaaactgttccacttgtatttgggtcaaaacagttagttgat
gaaagtggtttatttcattctgcttcaacgcagccagtcagtggagatggttcagttgga
attgtttcataccaacttgcaaagaaatgtgttcctcatttctctccaaaattaaaaaag
agagggtgtctcaaatcaccattttctgtgaaacttctacaagaagccagccttcagctg
gaagcagaaaatattaagatcatctctgttaggaccaaaaattgtttgataccatggaca
cagttattccagctgcagagtcaggatggttactggcagttgagccaagagcttggattg
atattagagttggatgaagactatttaattaacgtcttcctcaagcaaaaaggaattcag
tccttaggtctcaaaggaaaagaaaacctgctgcagttgattgccacccttctggtgctg
cagctgattcattttacgcaacaactagaaggcattgttttgaaatcccttctcaaattg
gacgaaccaacaaagtcaagcactatacactgggcatttaactctgtaaagaaggcagta
aaatgggcgaagaatgtagatggacagtattcagccatctgcaatcgacttcaactggga
agagactgggaatcagctactcgtcagctgttacgcatagatcccattaaagctagctct
cctctttatcggataataagccgaggcgggtaa

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