Latimeria chalumnae (coelacanth): 102359250
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Entry
102359250 CDS
T02913
Symbol
PRDM2
Name
(RefSeq) PR/SET domain 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00310
Lysine degradation
lcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102359250 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102359250 (PRDM2)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102359250 (PRDM2)
Enzymes [BR:
lcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
102359250 (PRDM2)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102359250 (PRDM2)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102359250 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2HE
zf-C2H2_11
Zap1_zf1
zf-H2C2_2
PyrI_C
zf-C2H2_jaz
zf-C2HC_2
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
102359250
NCBI-ProteinID:
XP_006005239
Ensembl:
ENSLACG00000004511
LinkDB
All DBs
Position
Un
AA seq
1646 aa
AA seq
DB search
MDKGASGPGTVAETVSDVPGHIHKGLPEELSLRQSAIDEARVGVWAAKSIPKGKKFGPFV
GERKKRSQVKSNVYMWEVYYPNWGWMCIDATDPKKGNWLRYVNWARSGEEQNLFPLEINR
AVYYKALKPIEPGEELLVWYNGEDNPEIAAAIREERANNLTKKNSPKAKKGKKKEGQKHK
RKEILKKKKSDSGIIAVNMRDSEEGKCPKEEDENPSVSAVLSVEQTAVIQIMVNQDVLPE
LVTSLPVCEEQIVEDKNSGESTEGRLKKEAGNEVEITDFESAKTVEKEAMPISEDYPQML
LEEKLGGPTPEENLATSEGSPKKKPVAKKTKVDPNGDVPESLMFPCQHCERRFTTKQGLE
RHMHIHVSTVNHAFKCRYCGKAFGTQINRRRHERRHEAGTKRKPTLTLAIVPQQSVEIYT
DGITGDDSRTGSPNELNTLDNIQDSKISESEKLPQVITNSEVADENGEHKGQHSCKYCKK
VFGTHTNMRRHQRRIHERHLLSKSIGQKLSLIEEPLPEKDQTQPPPSIYIPNTEIEEEPE
VDDLYIMDISGNISENLNYYIDGKIQSNSNTSNCEVIEVESNSAELYGLNPLLTSVTVEP
SQNLVVAQMSVADLLPKEPSRCDQTESKKRRTTSPLLLPKIKTEVDVEPITPSSSLSTPP
LYPQSNENSAFHKEKNIYLSSKLKQLLQTQESNRPNPVISNENPKLGSCLASTTFSLSSG
RFKRRTSSPPNSPQHSPALKDFGKQADIKPVWSEGQLGLKVPKLESQCSSPAWSLTSRDE
NETTSPLCFNDYQMTSKDLIVNKPLSNVCNQQPLDLSSGIKQRTDVRFKAQVPWEAVLDL
SVHKKACSDTEIKECKGNITVQPTCSNIKKKKPTTCMLQKVLMNEYNGLEVAMEETISAD
SPSPCTAEESPIQPVSDLSVSPVVLSSLTFSPPLLTAPAVSLSHPPPPLTPTSLPSPSSC
TTIVTASTPPPPLLPSAPSPLPESYNASPVQSSPSPLSNTATSQSSLPVLSPSVSPAPSV
SPAPSPHSSDAPPTRVSSPDPPTLSSSPPPPSAVASISPPTPPPVVTAVVSPETLKIKKE
NDDEVVEEEEEELVATEQKEDSFPETQQAEVQELFSKTFICNVCEDPFPSIKDLTQHLYV
HAEEWPLKCEFCVQLFKDVSGLSEHRFSLHGVGKIFVCSVCQKEFAFFCNLQQHQRDLHP
DKECSHHELKNGTLRPKNFTDPNKANQVHMQAPPEESLAPSQEEEEDLNDSSEELYTTIK
IMASGVKPKGPDVRMGENQHYPSFKPPPFQYHNRNPMGIGATATNFTTHNIPQTFTTAIR
CTKCGKSFDNMPELHKHILACASVSDKKRYTPKKNPVPLKQTVQPRNGVIVVERSGQNAF
RRMGQPKRLNFSAEPPKLPANKLRLNALKKKKQLLQKAISQKNRTAVKEKEDQKTGASNS
DTHICPYCNRSFTYIGSLNKHVFYSCTKKPPSPPTKKHSLSGSSQRRRSADVEIKMQGMQ
THLGKTRARSSGPMQAQSTSPPKSQQKLKSLSQGKTRKASPSQSTLKNSSSLRMSKVVLA
EGRKPRLDKKSYSSPSSSKPSHRLLLRVNRNKALLQKKAAIGGKKVDRFSVKTRERSGGP
VTRSLQLTPSTETNENKNELFRETSE
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggataagggcgcctcaggccctggaaccgtagcagagactgtatcggatgtacctggg
catattcataagggacttccagaagaactgagtctacgccaatcagccattgatgaggca
agagtaggtgtgtgggctgccaagtctattccaaagggtaaaaaatttggcccatttgtt
ggggagagaaagaaaagatcccaagtgaagagcaatgtgtacatgtgggaggtttattat
ccaaactggggctggatgtgtattgatgccactgatccaaagaaagggaactggctgcgg
tatgtgaactgggcacgctcaggggaggaacaaaatctctttccattggagatcaacagg
gccgtttactacaaagctctaaagccaatcgaaccaggagaagagctgttagtgtggtac
aatggggaagacaacccagagatagcagctgctattagggaagagagagccaacaatctg
accaagaagaattcaccaaaagcaaagaaaggaaagaagaaagaggggcaaaaacacaaa
aggaaagaaatattgaaaaagaaaaagtctgattctggcatcatcgctgtcaacatgaga
gactctgaagagggtaagtgtcccaaagaggaagatgaaaacccatctgtgtcagcagtg
ctgtcagtggagcagacagctgtcatccaaataatggtaaatcaggatgtacttcctgag
ttagtgacttccctgccagtctgtgaggagcaaattgtagaagacaagaattcaggtgaa
tcaactgaaggcagattaaaaaaagaagcgggaaatgaagttgaaatcactgattttgaa
agtgcaaaaactgttgaaaaagaagcaatgcctatttctgaagactatccacagatgtta
ctagaagaaaaactaggcggacccacacctgaagaaaatcttgccacttctgaaggttct
cctaagaagaaaccagttgccaaaaaaaccaaagtagatccaaatggggatgtaccagaa
tcattaatgtttccttgtcaacattgtgagcgaaggtttacaacaaaacaaggtttggag
cgtcatatgcatattcatgtatcgactgtaaatcatgcctttaagtgtagatattgtggc
aaagcttttggcacacaaattaacagaagaaggcatgaacgccgccatgaggcagggaca
aaaaggaaaccaactttgacactagctatagttccacaacaatcagtagaaatttataca
gatggaataactggagatgacagtagaactggatctccaaatgaactgaacactttagat
aacattcaagacagcaaaatttcagaatcagaaaagttgcctcaggtgatcacaaattct
gaagtagcagatgagaatggggaacataaaggacaacattcgtgcaagtattgtaaaaag
gtttttgggactcatacaaacatgcgcagacatcagcgtcgaatccatgaacggcacctg
ctttccaaaagcatcgggcagaagctttccctcattgaagaacccttgccagaaaaagat
caaacacagccacccccatctatatatattccaaacacagaaatagaagaagaaccagaa
gtagacgatttatacattatggatatttcaggcaacatttcagaaaacctaaattactat
attgatggcaaaatacagtctaacagtaacactagcaattgtgaagtaattgaagtggag
tcaaattctgcagaattgtatggacttaatcctttgctgacatcagtcacagttgaacct
tctcaaaatctagtagttgcacagatgagtgttgctgatttactacccaaagagccctca
agatgtgaccaaacagagtccaaaaagagaaggaccacaagcccacttctgttacccaaa
ataaaaacagaagttgatgttgaacctataacaccatcttcatctttaagtaccccacca
ttgtatcctcagtctaatgaaaactctgcctttcacaaggagaagaatatttacttatct
tcaaagcttaagcaacttctgcaaacacaagagagcaacagacctaatccagtaatatct
aatgaaaaccccaaattagggtcatgtttggcatcgacaactttctctttgagctctggc
agatttaaacgaaggactagctcaccccctaattctccacaacacagtccagcacttaaa
gactttggaaaacaagctgatataaaaccagtctggagtgaggggcaacttggcctaaaa
gttccaaaattagaaagccagtgtagttcacctgcatggagtttaacctctagggatgag
aatgaaaccacaagccctttatgttttaatgattatcagatgacttctaaagacttgata
gtgaacaagcctttaagcaatgtatgtaatcagcaacctttggatttgtcaagtggcatc
aagcagagaacagatgttaggttcaaggcacaagttccttgggaagctgtgttagatctt
agtgtgcacaagaaagcttgcagtgacactgaaattaaagaatgcaaaggaaacattaca
gtacaacctacttgtagcaacattaaaaagaagaaacccacaacgtgcatgctgcaaaaa
gttctgatgaatgaatataatggattggaagtagcaatggaagagacgattagcgcagac
agtccaagcccatgcacagcagaagaatctcctatacaaccggtttctgatttgtctgtg
tcacctgttgttctttcttcccttactttttctccacctctgcttacagctcctgctgtt
tctttatctcatccacctcctcctcttactcctacatctctcccctcaccatcctcatgt
actactattgttactgcttccacaccccctcctccacttttaccttcagctccttctcct
cttcctgaatcttacaacgccagtcctgtacagtcctcaccttcacccctttctaatacc
gcaacttctcagtcttctctaccagttctttctccatctgtatctcctgctccatctgta
tctcctgctccatcacctcattcttctgatgcccctcctacacgtgtgtcttctcctgat
cctcctactttatcatcatctcctccacctccttctgcagttgcttccatctcccctccc
actcctcctcctgttgtcacagcagtggtttccccagaaacattaaaaattaaaaaagaa
aatgacgatgaggtagtggaggaggaggaggaggagcttgttgcaactgaacaaaaggaa
gatagttttccagaaactcaacaggctgaggttcaagaacttttcagtaaaacctttatt
tgcaacgtttgtgaagacccttttccttctataaaggatcttacccaacatttatatgtt
catgcagaagagtggcctttaaagtgtgaattttgtgtgcagctctttaaagatgtttca
gggttgtcagagcatcgcttctcactgcatggggtcgggaagatttttgtgtgttctgtt
tgtcagaaggagtttgcctttttttgcaatttacaacagcaccagcgagatctgcatcca
gataaggaatgctcacatcatgagcttaaaaatgggacattaagacccaagaatttcaca
gacccaaataaagcaaatcaagttcacatgcaggccccaccagaagaatcacttgcacct
tcccaagaagaggaggaggatctaaatgattcctcagaagagctatatactactattaaa
ataatggcttctggagtaaagccaaagggccctgatgttcgaatgggtgaaaatcagcac
tatccaagtttcaaaccacctccatttcagtaccacaacagaaatcctatgggaattggt
gcaacagctacaaactttaccactcataatatcccccagacttttaccactgccattcgc
tgtaccaagtgtggaaaaagctttgataacatgcctgagttacacaaacacatcttagct
tgtgcttctgtaagtgacaagaaacgatacactccaaagaaaaatccagtgccactaaaa
caaaccgtgcaacccagaaacggagtaatagttgtagagagatctgggcagaatgcgttc
aggcgaatggggcaacccaaaaggttgaatttcagtgcagagccccctaagctgcctgcc
aacaagctgagattaaatgcgttaaagaaaaagaagcagctgctacaaaaagcaatttct
cagaagaacaggactgctgtaaaagaaaaagaggaccagaaaactggtgcctccaattca
gatactcacatctgcccctactgtaaccggagtttcacctatattggaagcttgaataaa
catgttttttacagctgcactaagaagcctccttcaccacctactaaaaagcactcccta
tctggtagcagtcagcgtagaaggtcagccgatgtggagattaaaatgcagggtatgcaa
actcacttggggaagacgagagcacgcagctcagggcctatgcaagcacagtcaacatcg
ccccctaaatcccagcaaaaattaaagtctttgtctcagggtaagacaagaaaagcaagt
ccttcccaatccaccttaaaaaactcaagttctttgagaatgtccaaagttgtgcttgca
gaggggaggaaacctagacttgataagaagagctattcttccccatcctcaagcaaaccc
tctcataggctgctgcttagagtaaataggaacaaagctcttttgcagaaaaaggctgcc
ataggaggaaagaaagtggatagattcagtgttaaaacaagggaacgaagtggtgggcct
gtcacaagaagtttacagcttactccaagcacagagacaaatgaaaacaaaaatgaatta
tttcgtgaaacttctgaatga
DBGET
integrated database retrieval system
