Latimeria chalumnae (coelacanth): 102359284
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Entry
102359284 CDS
T02913
Symbol
DIS3L
Name
(RefSeq) DIS3 like exosome 3'-5' exoribonuclease
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102359284 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102359284 (DIS3L)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102359284 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
DctP
Motif
Other DBs
NCBI-GeneID:
102359284
NCBI-ProteinID:
XP_005990163
Ensembl:
ENSLACG00000007995
UniProt:
M3XHP3
LinkDB
All DBs
Position
Un
AA seq
1053 aa
AA seq
DB search
MTLFERMLKTEKILHLRNSRGKTVRVVREHYLREKVPCYSSFCQANCQNDGKLLANDVTH
YVVPDWKVVQDFLEILEFPELKGVVFMQTACQAVQHQKGRRLYSKLRNLLKDARHNCVLF
SNEFQKCSYLPREKGESKEKWQTRCIYYAAVWYYHHLVGQMPVVMVTEDEEAIKQFGSET
EGVFVISFKDYLENFWPDLKAVHELYDSILQSQRDRENESQENHGKEFPEHLPLEILEAG
IKSGRYIQGILNVNKHRAQMEGFVRLQGVTGKETELKSDILVYGGKAQNRAIHGDVVAVE
LLPKNEWKGRGTALCESDDKVVVEVQSEPMPTGRVVGIIQRNWRDYVVTFPPREDIQSQG
KSAQKILVVPWDYKIPKIRISTQQAEALQDYRIVVRIDSWESTSLYPNGHFVRVLGRIEE
LETEITSILIENFISVAPFSEAQMREMPVNTPQNPWKVDPEEEAERVDLRNTHLVFSIDP
KGCEDVDDALSVRKLRNGNLELGVHIADVTHFVKLSSCTDLEARARATTYYLADRRYDML
PAVLSADLCSLLGGVDRYALSVMWELDKTSYEVKKVWFGRTIICSTYKMFYEAAQALLDG
DLNVVDEIPELKKLDDDSRQQKLNDLIWAVENLTDIARHIRTKRSVCGALELEGVEIRVQ
LDDDKNIDDLVPKQPLEVHETIAECMIFANHWVAKKVWESFPYHALLRHHPAPRQEFFTN
LIECARAKGFNMDTSSNKALADSLDHAEDPNDPFVNKLLRSMAIQAMSNALYFSTGSCSE
DQFYHYGLALDKYTHFTSPIRRYADIVVHRLLMIAILKEKNLEAEEPFFSNKDLEELCQH
INNRNRAAQQAQKQSTELFQCMYFKDKDPQTDERCIADGIIYSIRSNGVLVFVPRYGIKG
AAYLKDKEGRVVSTDSDSNCKWKPGSLQRFQNKIISIVTDGGSVTFNMFDHITVRISVQT
SRAHADTIRLEIISNKPYQSSSSVVKHETLHSAKADLVKEVTKAAEEAQLAHRKASFRAV
EEEYKEYCQTQGTNLYTLLEEIRELALLDMSDV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtttgaaaggatgctgaaaacggagaaaattctgcacctgagaaactccaga
ggaaaaacagtccgggtggttagagagcattatctgagagaaaaggttccctgttatagc
tctttttgtcaagcaaattgccaaaatgatggcaaattgttggcaaatgatgtcacccac
tatgtcgtccctgactggaaggttgttcaggatttcttggagattttggagttcccagag
ctcaagggtgttgttttcatgcaaacagcatgtcaagctgttcagcatcagaagggacgc
agactttacagcaaacttcgcaacttgttgaaagatgcccgtcacaactgtgttttattt
tcaaatgagtttcaaaagtgttcgtacctaccaagggaaaaaggtgaatccaaggagaaa
tggcaaactagatgtatttattatgctgcagtgtggtattaccaccacctagtgggccag
atgcctgtcgtcatggtaacagaagatgaggaagccatcaagcagtttggaagtgaaact
gaaggtgtatttgtcatatcttttaaggactacttggaaaatttttggcctgatctcaag
gctgtccatgagctatatgactcaattcttcagtctcagagagacagggaaaatgagagt
caagagaaccatgggaaagagttcccagaacacctccctctggaaatactggaggctgga
attaaatctggaagatatattcaaggtattcttaatgtgaacaaacatagagcacagatg
gaaggttttgttcgcttacaaggagtaactggaaaagaaactgaactgaagagtgacata
ctggtttatggtggaaaagctcagaaccgtgccatccatggtgatgtggtagctgtagaa
ctattacctaaaaatgagtggaagggaagaggcaccgcattgtgtgagagtgatgacaaa
gtggttgtggaagtccagagtgaacctatgcctacaggtagagtagttggtattatccaa
aggaattggcgggattatgtagtaacgtttcctcccagagaagacattcagtctcaaggt
aaaagtgcccaaaagatccttgtcgttccgtgggattacaagattcccaaaattaggatc
agtacacaacaggctgaggcattgcaggattacaggatagtagtacgtattgattcctgg
gagtcaacgtccctttatccaaatgggcactttgtaagggttcttggaaggatagaagag
cttgaaacagaaattacaagtattctgattgaaaacttcatatccgttgcccctttctca
gaggcccagatgcgcgaaatgcctgtgaacacacctcagaacccctggaaggtggatccc
gaggaggaagcagagcgtgtggatctaagaaacacccatcttgtcttcagtattgaccct
aagggctgtgaggatgtggatgatgcgctgtctgtaaggaaactgagaaatggaaacctg
gagttgggtgtccatattgctgatgtgacccattttgtgaagttgagttcctgcactgat
cttgaagctagagcaagggctactacatattatttagcagatcgacgttatgacatgcta
cctgccgttcttagtgctgacttgtgttcccttcttggtggtgttgacaggtatgcactg
agcgttatgtgggaactagataaaacatcatatgaagtaaagaaggtgtggttcggcagg
acgataatatgttctacatataaaatgttttatgaagctgctcaagctttactggatgga
gaccttaatgttgtagatgagatcccagaactcaaaaaacttgatgatgatagtaggcag
caaaagttaaatgatttgatctgggcagtagaaaacctgactgatatagcccggcatatt
cgtaccaagaggagtgtctgtggtgctctggagctggagggggttgaaatcagagtacag
ttagatgatgataagaacattgacgatcttgtcccaaaacaaccactagaggttcatgag
acaattgctgagtgcatgatttttgccaatcactgggttgcaaagaaggtatgggaaagt
tttccataccatgctttactgcgccatcaccctgcacctcgccaagagttcttcaccaac
ctgattgagtgtgccagagcaaaaggattcaacatggataccagctctaacaaagcttta
gcagactcccttgaccatgcagaagatcccaatgacccctttgtgaataagctgttgcgt
tccatggccattcaggcaatgtctaatgccttgtatttctctactggttcctgtagtgag
gatcagttctatcactatggccttgcccttgacaaatatacccatttcacctccccaatc
aggaggtatgctgacattgtggtgcataggctgctaatgatagctattttaaaggagaag
aacttagaagctgaagagcccttcttcagcaacaaggatctggaagaattatgccaacat
atcaacaatagaaacagggctgctcaacaagcacagaagcaatccaccgagcttttccaa
tgtatgtactttaaagataaggaccctcaaacagatgaacgttgcatagcagatggaatc
atctattccattcgatccaatggtgtgcttgtgtttgtcccaaggtatggaataaaaggt
gctgcatatctgaaggacaaagaaggtcgtgtggtttctacagactctgacagtaactgt
aagtggaagcctggctccctccagcgatttcagaacaaaatcatttccattgtcaccgat
ggaggttctgttacttttaacatgtttgatcatattacagtaaggatctctgtgcagaca
tctcgagctcatgctgacaccatcagactggagattatcagcaataaaccataccaaagt
tcaagcagtgtagttaaacatgagacattacattcagcaaaagcagacttggtcaaggaa
gtaacaaaggctgcagaggaagctcaacttgcccatagaaaagctagctttagagccgtc
gaggaagaatacaaagaatactgccaaactcaaggaactaacctgtacactctattagaa
gaaatcagagaattggcacttctggacatgtcggatgtgtga
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