KEGG   Latimeria chalumnae (coelacanth): 102359341
Entry
102359341         CDS       T02913                                 
Symbol
NDC1
Name
(RefSeq) NDC1 transmembrane nucleoporin
  KO
K14315  nucleoporin NDC1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102359341 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102359341 (NDC1)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102359341 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 102359341
NCBI-ProteinID: XP_014347850
LinkDB
Position
Un
AA seq 562 aa
MIGKAIHPQQVLHSLVHTVLGLLVAWCTAAMAGGRYQQLTAPCAAEDNRSTSHLICLNEY
HHFLLLAGAFMGYSYSLLYLVNNMSYLPFPTIQQYKYLRFKGVLPLVIKHSAVQSLYSVR
NYCIIYYLIGCIPREWLITSMNLCKDDTLQSLDSLTGLLDFSLLYQTWLCGTFLLVTWYI
TWLLFRIFATEVFCFSIQPSFVEEANQCLPKVLSSNPPPIVKFLALQDFALLSQHSFSRR
QEVFSLSQPGGHPHNWMAISGECLALLSGLTQRLIAHQEAVAANGRMKPHSSYDEPRKSS
SNSGRSFSEDACGRTVSLTPQSILSPAPAPFIKTPLAASLKPTPIAALTPDSGSPFISPI
VNRRAVLLDPSSPWYGSVQSPHVMRRGPKLWTSKSGAPMNGSSNVFEPTPVLVRRGPADA
EKTNFFSVWFQRKQDQVKTFLAKRVLVMYLFSKHPETSSQALFADSQTHIWALEGLSHLV
SASFTEDRFGVVQTTLPSILSTLLTLQEAVDKHFKLPHASSKPARSSGSLVDTSYKTLRF
ALRASLKTAIYRITSTFGEHLK
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgattgggaaggcaatccacccccagcaggtcctccattctcttgtgcataccgtgctg
ggactgctggtggcctggtgcactgcagcaatggccgggggtcggtatcagcagctcacc
gcgccctgcgcagctgaagacaaccgcagcaccagccatctgatatgcctgaatgaatac
catcacttcttattgcttgctggtgccttcatgggatacagctacagccttctttattta
gtgaacaacatgagctatctgccttttcctactatacagcaatataagtacctgcggttc
aaaggagttttgcctcttgtaataaaacacagtgctgtgcagtctctgtattcagtcaga
aattactgcattatctattatttaataggctgcatcccacgagaatggctaattacatca
atgaacctttgtaaagacgacacactacagtcacttgacagtctgacaggactgctggat
ttctctctgctctatcagacctggctatgtggtacttttctccttgtaacatggtatatc
acttggctacttttcagaatttttgcaactgaggtcttttgtttttctatacagccatct
tttgtagaagaggcaaaccagtgtcttcctaaagtcctgagcagcaacccccctcctatt
gtgaagtttctagcactgcaggactttgctcttttgtcccagcattctttttctcgaagg
caagaggtctttagtcttagccagccaggcggccatcctcataactggatggcgatctca
ggggagtgtttggccttgttaagtggtttaactcaaagactgattgcccaccaagaggca
gtagctgccaatggaagaatgaaaccacactcgagttatgacgaaccaaggaaatcctca
agcaattcaggaaggtccttcagtgaagatgcttgcggtcggacagtgtctttgacacca
cagtccattctatctcccgctcctgcacccttcattaaaaccccgctagccgcctcttta
aaaccaacaccgattgctgctttgactccagattcagggagcccatttatttcccctata
gtgaaccgtagggctgtcctgctggatcccagctctccttggtatgggtctgttcagagc
cctcacgtaatgagaagaggaccaaagctatggacctcaaaatcgggggctccgatgaat
ggatcttcaaatgtttttgaaccaaccccagtcttggttcgtaggggtcctgcggatgca
gaaaaaacaaatttcttttctgtgtggttccagagaaagcaagaccaggttaaaactttc
ttggctaaacgagtgctggtaatgtatttattcagcaagcatccagagacctcaagtcag
gctctctttgctgatagccagactcacatttgggcacttgaaggcttgtctcatctggta
tccgcttcattcacagaagataggtttggtgttgtgcagaccacactgccgtctattctc
agcacgttgcttaccctacaagaggcagtggataagcacttcaaactacctcatgcttct
agcaaaccagctcgatcctcagggagtttggtggacacctcttacaaaacactgaggttt
gcgctaagagcttcattgaaaactgcaatctacaggataaccagcacttttggggaacat
ttaaagtaa

DBGET integrated database retrieval system