Latimeria chalumnae (coelacanth): 102359352
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Entry
102359352 CDS
T02913
Symbol
U2AF2
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102359352 (U2AF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102359352 (U2AF2)
Spliceosome [BR:
lcm03041
]
Complex A
U2 snRNP components
U2 related factors
102359352 (U2AF2)
Complex B
102359352 (U2AF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_occluded
RRM_7
DUF4614
Motif
Other DBs
NCBI-GeneID:
102359352
NCBI-ProteinID:
XP_014349429
Ensembl:
ENSLACG00000001648
LinkDB
All DBs
Position
Un
AA seq
456 aa
AA seq
DB search
MSEFDEFERQLNENKQERDKENRHRRRSHSRSRSRDRKRRSRSRDRRSRDQRSGSRDRRR
RSRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPT
PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDK
NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVP
DSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQ
AIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLVSSQVQMGGHPTEVLC
LMNMVLPEELLDDEEYEEIVEDVRDECSKYGAVKSIEIPRPVDGVEVPGCGKIFVEFVSM
FDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcgacgagttcgagcggcagctcaacgagaacaagcaggagcgagacaag
gagaatcggcaccgaaggcggagtcacagtcgctctcgtagcagagaccgcaaacggcgc
agtcgcagccgggatcggcggagcagagatcagcgcagtggttcacgtgatcgcaggaga
cgaagccgctcccctcgccatgagaagaaaaagaagattcgcaagtattgggatgtacca
cccccaggttttgaacacatcacgcccatgcagtacaaggccatgcaagctgctggtcag
attccggccacggcattgctgccaacaatgacccccgatggcctggccgtgaccccgacc
ccggtgcctgtggttggcagtcagatgacaaggcaagccaggaggctgtatgtgggaaac
attccctttggaatcactgaggaagccatgatggatttcttcaatgcccagatgcgtctg
ggagggctgactcaggctccagggaatcctgtcctggctgtccagattaaccaggataag
aactttgccttcttggagttccgctcggtggacgaaacaacccaggccatggcctttgat
ggcatcatattccagggtcaatccctgaagatccgacgtccccatgattaccagcccctg
ccggggatgtcggaaaacccctcggtctacgtgccaggtgtggtctccactgtggtccct
gactccgctcacaagctcttcatcggaggactgcccaactacctaaatgatgaccaggta
aaggagctgctgacgtccttcgggccgctgaaggccttcaatctggttaaggacagcgcc
acaggactctccaagggctatgctttctgtgaatacgttgatatcaatgtcactgatcag
gccatcgctgggctaaacggcatgcagctgggtgacaagaaactgctggtgcagagggct
agtgtgggagccaagaatgccaccctgagtacgataaaccagacgccggtgaccttgcag
gtgccgggcttggtgagctcccaggtgcagatgggaggccatccgacggaggtgttgtgc
ctgatgaacatggtgcttcccgaagagctgctggacgatgaggagtatgaggagattgtg
gaggatgtgcgggatgaatgcagcaaatatggcgctgtgaaatccatcgagatcccgcgg
cctgtggatggggtcgaggtgcctgggtgtgggaagatctttgtggagtttgtttccatg
tttgattgtcagaaggccatgcagggcctgacagggcggaaattcgccaacagagtggtg
gtcaccaaatactgcgaccccgatgcttaccaccgccgggacttctggtaa
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