Latimeria chalumnae (coelacanth): 102359353
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Entry
102359353 CDS
T02913
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102359353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102359353
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102359353
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102359353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
PRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
zf-ANAPC11
Prok-RING_4
zf-RING_4
ANCHR-like_BBOX
Sina_RING
VCD
zf-UBP_var
RPC3_helical
Motif
Other DBs
NCBI-GeneID:
102359353
NCBI-ProteinID:
XP_014349708
LinkDB
All DBs
Position
Un
AA seq
557 aa
AA seq
DB search
MYDFVMLLASAAAAAPFPAELEEELNCSICLNIYKNPILLSCGHNFCKDCVEKVWESQAS
KGTYSCPECRAEFRERPPLQRNLKLCNVIERLLSTQIMEKQATVCCTFCLEAPLLAVKTC
LQCETSFCEVHLRKHNESVDHTLIEPIIHLEGRKCPEHKDLIRYYCTEDGTCVCVTCCVA
GKHKTHNVETVAEAAEKRKKELVISHLKLFSQTKDIEQTILQLEELLRFIDTTAMAERGK
VAIFYSEIKELLETAERKILDAIDTERKQIMDEVTNQITELEMKKNNILHKMQEVKFLRD
ISDPMDLLKESKCMAVSVEEEDEDDSDEKNGGGNDGDNIEEDTKGLLKENFVEQTTSLLK
DTMNRFVEILYVVQVKHGFILQKDSNLSFDADTVHKKVILSDFLKKAANIDDDQEYLKNA
KRFLTFGQVMSSRGFSSGHHFWELEVSAEGDWSVGLAYNSIERDGEVSAVGETSVSWCLD
YIDNNLSALFNCNIMALKKETEAPNKVGMYLDYEAGVLSFYDLTDILTYLHTFTCTFTEP
LYLTCYVYYSAWVKIKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattttgtcatgcttttggcctcagctgcagcagctgctcctttccctgctgaa
ctagaagaggagttaaactgttcgatctgcctgaatatctacaagaatcccatccttctg
agctgtggacacaacttctgcaaagactgtgttgaaaaagtttgggaaagccaagcatca
aagggcacctactcctgccctgaatgccgtgctgaattcagagagaggcctcctcttcag
agaaacctgaaactgtgcaacgtaatagagcgactcctttctacacagataatggaaaag
caagctactgtttgttgtaccttttgtctggaagctcctttactggctgttaaaacctgt
ttgcagtgtgaaacttctttctgtgaggtgcacctgaggaaacacaatgaatctgtggat
catactttgatagaacctatcatccacttagaaggtagaaaatgtccagaacataaggat
ctgattaggtattactgcactgaggatgggacttgtgtctgcgttacctgctgtgtggct
ggaaaacacaagacccataatgtagaaacagtggcagaggcagctgagaagagaaagaaa
gaattagtcatttctcatctgaaattgtttagtcaaactaaagatattgaacaaaccata
ctacagttagaagaactgctaagattcatagatacaacagcaatggctgagagagggaaa
gttgctattttctattctgaaatcaaagagctgctggaaactgcagagagaaaaatcctg
gatgccattgacactgagagaaaacaaattatggatgaagttacaaaccagattacagaa
ctagaaatgaaaaaaaataatattctgcacaaaatgcaggaggtaaagttcctgagagac
atcagtgaccctatggatttgcttaaagaatcaaagtgcatggctgtcagtgtagaggaa
gaggatgaggacgatagtgatgaaaagaatggtggtggtaatgatggcgacaatattgaa
gaagacactaaaggccttcttaaagaaaactttgttgagcagactacttcactgctaaaa
gacactatgaacaggtttgttgaaatactatatgttgtgcaagtaaaacacggtttcatt
ctgcagaaagattcaaatctatcatttgatgcagacactgtccataaaaaagttatcctg
tcagattttctcaaaaaggcagccaatattgatgatgatcaagaatatctgaagaatgca
aaaaggttccttacttttggccaagtgatgtcttctcggggcttttcctcaggccatcat
ttctgggagcttgaagtgagcgctgaaggagactggagtgtagggttagcgtataacagt
attgaaagggatggggaggtttctgctgttggggagacttctgtatcctggtgtctagat
tatattgataacaatctttcagcactgtttaactgcaacattatggctctgaagaaagaa
actgaagccccaaataaggttggaatgtacctggattatgaagcaggggtgctgtcattt
tatgatcttactgacatcctcacatatttgcacacctttacctgcactttcactgaacca
ctgtatcttacatgttatgtatactacagtgcgtgggtcaagattaaggcttga
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