Latimeria chalumnae (coelacanth): 102359367
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Entry
102359367 CDS
T02913
Symbol
GRIN2A
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04020
Calcium signaling pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102359367 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102359367 (GRIN2A)
04082 Neuroactive ligand signaling
102359367 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102359367 (GRIN2A)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Glutamate (ionotropic)
102359367 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102359367
NCBI-ProteinID:
XP_006008257
Ensembl:
ENSLACG00000002465
LinkDB
All DBs
Position
Un
AA seq
1353 aa
AA seq
DB search
MKKSQQRCFSSKDENKEDIFILVYYIVLVEKDVLSTFFQFGASIQQQAIVMLNIMEEYDW
HVFSIVTSTFPGYREFISFIKNVVENSFVGWELMNIITLDAVDGDAKAQIQLKKIQSSVI
LLYCSKDEAVYILEESRSLGLTGYGFIWIVPSLVTGNTDITPDAFPSGMISVSYDEWDYT
LDARVRDGLGIITTAASAMLEHYGYIPEAKTSCYGELERNELPSHTLHKFMMNVTWDNRD
LSFTEDGYQANPKLIVVVLNKEREWEKVGKWENKSLSLRYPVWPRFSSFVDSDSDDNHLS
VVTLEEAPFVIVENVDHLTGTCVRNSVPCRKHVKLNNITNEGTHIKKCCKGFCIDILKKL
ARTVKFTYDLYLVTNGKHGKKINNVWNGMIGEVVYKRAVMAVGSLTINEERSEVVDFSVP
FVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAVAVFIFEYVSPVGYNRN
LAQGREPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTA
NLAAFMIQEEFVDQVTGLSDNKFQRPYDYSPPFRFGTVPNGSTERNIKKNYPDMHQYMVK
FHQKGVQDALVGLKHGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYVFATTGYGIALQK
GSIWKRQIDLALLQFVGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAA
MALSLITFVWEHLFYWKLRFCFPGVCSGKPGFLFSISRGIYSCIHGVHIEEKKKSEFDFS
NQTNMLKLLRTAKTMTNMSNLNASRATSPKQTSDYVQRGSLLMDMVVDKGGLMYSDNRSF
QPKEAHYGDNISEMQTFASNHHKDNLNNYVFQGQHPLTLNETNPNTVEVAVSSETKVNSK
PRQLWKKSVETLRQSQGSLKEKVPEEKRHSVKNQRYIPEEVVHSDVSDTSSRATSHKNAD
NNKKHHKPKNNFKKRSVTSKYPRDCSEVELSYLKSKQSSTRDKIYTIDTVTEREPSFHIE
PHYYREAVAIPEDIDFPEIYQDHNENYRKPEAVVHINRTPLHNEDSLPNNEKKYNLYSKH
YSLKEKNFSPFEINDRLKQASTHCRSCLSKMPNYTGHFAMRSPYNRCEACLHMGELYDIS
EDQMLQEITGAIHPEEVYGHQWIQSDVAQLQKRNKLKLTRQHSFDNILEKPKEADLGRPA
RSVSLKEKDRFLDESPYANMFNIKPEKLLSSKASIFNHNLEESKRSKSLYLDHSSENPFM
HSYHEDQQLVHGRSSSDIYKQSKARNDNNLRSSIKSTASYCSRDGRIPNDMYISEHVMPY
VANKNSVYSAPRVLNSCSNRRVYKKMPSIESDV
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtcagcagcgttgtttctcttctaaagatgaaaacaaggaagatatattt
attttagtttattacattgttttggttgaaaaagatgtgttgtctactttcttccaattt
ggggcttccattcagcaacaagcaatcgtcatgctaaatattatggaagagtatgactgg
catgtattttccattgtgaccagcacctttcctggataccgtgaatttatcagtttcatc
aaaaatgttgtggaaaacagctttgttggttgggagttaatgaatatcattacgcttgat
gctgtggatggagatgcaaaggcacaaattcagctaaagaaaattcagtcttctgttatt
ttgttatactgttcaaaggatgaagctgtttacattttagaagaatcacgctcgttgggt
ctaactggttatggctttatctggatagtacccagcttggttacaggtaatacagacatc
acaccagatgcgtttccttctggaatgatttctgtctcttatgatgaatgggattatacc
ttggatgccagagtaagggatggccttgggattatcactactgctgcatcagccatgtta
gaacattatggttacattccagaagcaaaaactagctgctatggagaactggaaaggaat
gagctgccctctcatactctacacaaatttatgatgaatgtgacttgggacaacagagat
ttgtccttcacagaagacgggtatcaagcaaaccccaaactgattgtggtagttttaaac
aaagagcgagaatgggaaaaggtggggaaatgggagaacaagagcctgagcttgaggtat
cctgtttggccaagattcagttcattcgtggatagtgactcagatgacaatcacttaagt
gttgttaccctggaagaagccccgtttgttattgtggagaatgtggaccacttgactggg
acctgcgttagaaactctgtaccatgtcggaaacatgttaagcttaacaacataacaaat
gagggcacacatatcaagaaatgctgtaaagggttttgcatcgacattttgaagaaactg
gcgaggactgtgaagtttacttatgacctttatctggtgaccaatgggaaacatggcaaa
aaaatcaataatgtatggaatggaatgattggggaagttgtgtataaaagagcagttatg
gccgtggggtcccttacaattaatgaagagaggtcagaggtggttgacttttcagttcca
tttgttgagacgggtattagtgtcatggtatcaagaagtaatggaacagtttctccatct
gctttcctagagccctttagtgcatctgtgtgggtgatgatgtttgtaatgcttctcatt
gtttctgccgtggctgtttttatatttgaatatgttagtcctgtaggatataacagaaat
ttagcacaagggagagaacctcatggaccatcgtttacaattggaaaagcaatatggctt
ctttggggtctggtcttcaacaattcagtgcctgtgcaaaatcctaaaggaacaactagt
aaaatcatggtgtcagtgtgggccttctttgctgtaattttcctggccagctacactgcc
aaccttgctgcatttatgattcaagaggagtttgttgaccaagtgactggactaagtgac
aataagtttcaaagaccatatgattattcacccccatttcgatttggaactgtcccaaat
ggaagcacagagagaaatatcaaaaaaaactatccagatatgcaccaatacatggtgaaa
ttccatcagaaaggagtacaagatgcattggttggcttaaagcatggaaagctggatgcg
ttcatttatgatgcagctgttctcaactacatggctgggagagatgaaggctgcaagctt
gtgactattggtagtggatatgtgtttgctacaacaggctatggaatagctctgcagaaa
ggttcaatctggaaacgacagattgacctagctctccttcagtttgttggagatggtgaa
atggaggagctggaagcacagtggttaactggtatatgccacaatgaaaaaaatgaagtc
atgagtagccagctggatgtagataatatggcaggtgtgttctacatgcttgctgcagcc
atggcgctcagcctcataacctttgtgtgggagcatttgttttactggaaactcaggttc
tgctttcctggagtctgttcaggcaagcctggattcttgttttcaattagcaggggtatt
tatagttgcattcatggagtacacattgaagagaagaagaaatctgaatttgatttcagt
aatcagacaaacatgttgaaactactacgtactgccaaaaccatgaccaatatgtctaat
ttaaatgcttcaagggctacatcccccaaacagacttctgattatgtacagagaggatct
ttgttaatggacatggttgtggataaaggaggtctaatgtactctgataacagatccttc
cagccaaaggaagcacactatggtgataacataagtgaaatgcaaacatttgccagcaat
catcataaagataacctcaacaattatgtatttcaaggacagcatcctcttacacttaat
gaaactaatcccaacactgttgaagttgctgttagttcagagacaaaagtaaactcaaag
ccaaggcaactttggaagaaatctgtagaaactctacgacagagtcaaggctccctcaaa
gaaaaggttcctgaggaaaaaaggcactctgttaaaaaccagaggtacattccagaagaa
gttgtccattcagatgtctcagatacttcaagccgagccacatcccacaagaatgcagac
aataataagaaacaccataagcccaagaataattttaaaaaaagatctgtgacctccaaa
tacccaagagattgtagtgaagttgagctgtcttatctaaaaagcaagcagagctcaact
cgtgacaaaatttataccattgacactgtcactgagagagagcccagttttcatatagag
ccacactattacagagaagctgtggctattccagaagatatagactttcctgaaatttat
caggatcataatgaaaactacagaaaacctgaagcagttgtacatataaataggactcct
ctgcataatgaagacagtcttccaaacaatgaaaaaaaatacaatctttattcaaagcac
tatagcttgaaagaaaaaaacttttccccttttgagataaatgataggctaaagcaggct
tcaacacactgtagaagctgtctttccaaaatgccaaattatactggtcattttgctatg
aggtcgccatataataggtgtgaggcttgcttacacatgggagagctgtatgatattagt
gaagatcaaatgctgcaggaaattactggggcaatacaccctgaggaggtatatggacat
cagtggatccaaagtgatgttgcccagcttcagaaaaggaataaactgaaactcaccagg
cagcattcttttgacaacatccttgagaagcccaaggaagcagatttgggaagacctgct
cgcagtgttagtttaaaggaaaaagataggttccttgatgaaagtccttatgcaaatatg
tttaacatcaaaccagaaaaacttttgagtagcaaggcttccatttttaatcacaacttg
gaggaaagtaaacgcagcaagtcgctttatcttgaccacagctctgaaaaccctttcatg
cattcttatcatgaagaccagcagttggtccatggcagaagttcttctgacatttataaa
caatcaaaagcaaggaatgataataacttgaggtcctctataaagtccacagcatcgtac
tgttccagagatggacgcattcctaatgacatgtatatttcagagcatgttatgccttat
gtagcaaataagaatagtgtgtactctgctccaagggtcctaaattcctgtagcaataga
cgagtgtataagaaaatgcctagtattgaatccgatgtttga
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