KEGG   Latimeria chalumnae (coelacanth): 102359715
Entry
102359715         CDS       T02913                                 
Symbol
PRPF3
Name
(RefSeq) pre-mRNA processing factor 3
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102359715 (PRPF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102359715 (PRPF3)
Spliceosome [BR:lcm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    102359715 (PRPF3)
SSDB
Motif
Pfam: PRP3 Prp3_C PWI HEAT_2
Other DBs
NCBI-GeneID: 102359715
NCBI-ProteinID: XP_014349606
Ensembl: ENSLACG00000010541
LinkDB
Position
Un
AA seq 626 aa
MSLSKRDLEELKPWVEKTVRRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTS
RFVDKLFEAVEEGRSSKYSKSSGDRIRKRELKEVFGDDSNVSRESSAVKKRRIPRFEEVE
EPEVLPGPPTESPGMLTKIQIKQMMEAATRQIEERKKQLSFIAPPVPQAPTTNRQKSSGA
QSERLPTGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLLGSANMVGLANLH
AMGIAPPKVEAKDQTKPTPLILDEQGRTVDASGKEIELTHRMPTLKANIRAVKREQFKQQ
LRERPSEDMESNTFFDGRVSAGPAQRPKRTFKFHEKGKFEKIAQRLRTKAQLEKLQNEIS
QAAKKTGIQASTKLALIAPKKELREGEVPEIEWWDSYIIPANTELTEDALSKQEEYFGIT
NLVEHPAQMGVPVDMDKPVTLGVYLTKREQKKLRRQTRREAQKELQEKVRLGLMPPPEPK
ERKKKIKIXLCFHRAHEEANAARKLTAEQRKEKKAKKLKEDTSQGVYISVYRVRNLTNPA
KKFKVEANANQLYLTGVVVLHKDVNVVVVEGGPKAQKRFKRLMLHRIKWDEQTSNSKGDD
DDGSDEESVKKSNKCTLVWEICRNTR
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgtctctttcgaagcgagacctggaggagttgaagccatgggtagagaagacagtgcgg
cgggttctgggtttttcagaacccaccgtggttacagctgcattaaactgtgttgggaaa
ggaatggacaaaaagaaagcagcagaccacctgaagccatttctggatgattccacctca
cgatttgtggataagctgtttgaggcagtggaagagggacggagctccaagtattccaaa
tccagtggggacaggatccggaagcgagaactgaaggaggtttttggggatgactcgaat
gtgtcccgggagtcttcagctgtgaaaaagcgtcgtatcccccggtttgaggaagtggag
gaaccagaagtacttccaggaccccctacagagagcccaggaatgcttacaaaaatacag
atcaagcagatgatggaggctgcaacccggcagatcgaggaaaggaagaaacagctcagc
ttcattgctccgccggtaccccaggcgccgaccaccaaccgtcagaaatcttcaggcgca
cagtcagagcggcttccaactggaaacacaatccagccctcacaggccgccacgttcatg
aatgacgctatcgagaaggcgaggaaagctgcagagctgcaggcgcgcatccaggcgcag
cttgcactcaaaccggggctcctcggcagcgccaacatggtggggctggccaatcttcac
gccatgggcattgcaccacctaaggtggaggcgaaggatcagacaaagcccacaccgctg
atcctggatgagcaaggccgcaccgtggatgccagcggcaaagagattgagttgacccat
cgcatgccgacactaaaagccaacatccgggcggtgaaacgggaacagtttaagcagcag
ctgagggagcggccctctgaagacatggaatccaacacattcttcgacggccgtgtttct
gccggccctgcccagcgcccgaaacgcactttcaagttccacgagaagggcaagtttgaa
aaaatagcccagagattgcggacaaaggcccagttggagaagctgcagaatgagatttct
caagcagctaagaagaccggaatccaagcctctaccaaactggctctgattgcaccgaag
aaggagctgagagaaggggaggtccctgagatagagtggtgggactcttacatcatccct
gccaacactgaactgacagaagatgctttatcaaaacaggaagaatattttggaattaca
aacttggtggagcatcctgctcagatgggcgtgccagtggatatggacaaaccagtgacg
ctgggcgtgtatctgacaaagcgagaacagaaaaagctgcgcagacagacgcggagggaa
gcgcagaaggagctgcaggagaaggtcaggctgggcctgatgcctccgcccgagcccaaa
gaaagaaaaaaaaaaattaaaatctgactgtgtttccatagagcgcatgaggaggcaaac
gcagcccggaaactgactgcggagcagagaaaggaaaaaaaagctaaaaaactaaaagaa
gacacttcacagggtgtctacatcagtgtgtacagagttcggaatttgactaatccggca
aagaagtttaaagtggaagcaaatgcaaaccagctgtacttgacgggcgtggtggtcctt
cacaaagatgtgaacgtggtggtggtggaaggcggtccaaaggctcagaagaggtttaag
cgactgatgttacatcgcatcaagtgggatgaacagacttcaaactcaaagggagatgat
gatgacgggtcagatgaggaatctgtgaaaaagtcaaacaaatgcacactggtttgggag
atttgccgtaacacccgctga

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