Latimeria chalumnae (coelacanth): 102359726
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Entry
102359726 CDS
T02913
Symbol
GAPVD1
Name
(RefSeq) GTPase activating protein and VPS9 domains 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102359726 (GAPVD1)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102359726 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
102359726
NCBI-ProteinID:
XP_014345960
Ensembl:
ENSLACG00000018166
LinkDB
All DBs
Position
Un
AA seq
1465 aa
AA seq
DB search
MVKSDIHTLAHHLKQERLYVNSEKQLLQRLNADVLKTAEKLYHTAWIAKQQRINLDRLIL
TSAEASPAECCEHAKDLEDTQFVDGYKQLGFQEAVFGEFLNKLRENPRLVASCLVAGEKL
NQENTQSVIHTVFTSVYGNCIMQEDESYLLQVLRYLIEFELKESDNPKRLLRRGTCTFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKLFGEKGT
EQFRRKVHELVESNEGKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLDVG
EVRAMCTDLLLVCFICPAIVNPEQYGIISDAPVNEVARFNLMQVGQLLQQLAMTGTEEGD
PRMRSSLSRFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYMTNSQLLSLVGF
MWNIKLGNYLGEEDRTALENLMANVPQTIAWKSNSLELNPFNTTQFSPATIPANKKNRSP
MAARGRSRSNTQTEQHLDLEGGSQESIPEVQPEEVLVISLGTAMQTTPGMMSENEVLNMQ
LADGGQGEVPVDDMKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSEL
GAGPSGSNGVDALQLLEHEHATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDV
LGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGTGPILLDPCTGSTISETTSEAWSVEV
LPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIP
NKIEDLRSECSSDFGGKDSVTSPDMDESAHGTHHLTSPPSQTESLLAMFDPLSSGEASVA
LTVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPVFGSHVSVQTEADALKQRHSYPERL
VRSRSSDIVSTGRRPMSDPGWNRRSANEEKDLSAGSSGTIAGLNATALLPGPSSSPSKDS
LKGEAEERKDSDDEKSDRNKPWWKKRFVSAIPKAPIAFRKKEKHEKDKDDQVQERFPTIP
DDTVPRLSAQAQAAEDILDKYRNIKRTSPSEGATTAYDGGEVGGDGESVHDSPREEALQN
ISADDLPDSASQAAQPQDTSFSYRDAKKKLRLALCSADSVAFPMMTHSTTRNGLPDHTDP
EDNEIVCFLKVQLAEAINLQDKNLMAQIQETMRCVSRFDNRTCRKLLISIAEDYRKRAPY
IAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESREKQILEFIRDFQ
NLTAADDKTALVEDFLKSLNGAMAQDVIWQNASEEQLQDAQMAIERSVMNRIFKLAFYPN
QDGDILRDQLFQEHIQRLCKVVTANHRALQIPEVYLKEAPWPSAQAEIRTISAYKTPRDK
VQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYINNFYASRL
SGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagtcggatattcatactctggcccatcatctcaagcaggagcgtctgtatgtg
aactcggaaaaacagcttctacaacgactaaatgcagatgtactgaaaacagctgagaaa
ctttaccacacagcttggattgcaaaacagcagaggattaatttggataggcttatcctt
acaagtgctgaagcctcccctgctgaatgttgtgaacatgccaaagacctagaagataca
cagtttgttgatggatataaacaattaggatttcaggaggcagtctttggagagtttctg
aacaaactgagagagaaccccaggcttgttgcctcatgcctggttgcaggagagaaactc
aaccaagagaacacacagagtgttatccatactgtctttacatctgtttatggcaattgc
atcatgcaagaggatgagagctacctcctccaagttctacgttatttgatcgaattcgaa
ctgaaggagagtgacaacccaaagcgactgttacgaagaggaacctgtacctttagtatt
ttgttcaaacttttttctgaaggtctttactctgcaaaactctttctcacagcaacactg
catgaacctattatgcagttgctggtggaagatgaagatcacctagagacagaccctaat
aaactgattgagaggttctcccctgctcagcaggaaaaactgtttggggagaaaggtaca
gagcagttcaggcgcaaagttcacgaactcgtggaatccaatgagggcaaactggtgacc
ctggtgaacaaatttattggctaccttaagcagaatacctactgcttcccacatagttta
aggtggattgtgtcacagatgtacaaaacgttgtcctgtgtagaaagactggacgttggg
gaagtgagagctatgtgtactgaccttctattggtttgtttcatctgcccagcaattgtg
aacccagaacagtatggaatcatttctgatgctccagtaaatgaagtggcaagatttaac
ttaatgcaggttggccagcttttacagcaattagcaatgaccggtacagaagaaggagat
cctcgaatgaggagtagcctctccagatttgacaaaggttgtgttgctgcttttcttgat
gtagttatcggtggccgtgcagtggaaacacctccaatgtcctctgtcaatcttctggaa
ggactcagtaggactgtggtttatatgaccaatagtcaacttctaagtctggttggcttt
atgtggaatataaagttggggaactatctaggagaagaggacaggactgcacttgaaaat
cttatggcaaatgtaccccagactattgcatggaaaagcaacagcctagaactgaatccc
ttcaataccactcagttctctcctgcaaccattccagcaaacaagaaaaaccgatctcca
atggccgcacggggcagaagtaggtcaaatactcaaactgagcaacacttagaccttgaa
ggaggatctcaagagtccatcccagaagttcaaccagaagaggtgttggtaatttcgttg
ggaacagcaatgcaaacgacaccaggcatgatgtcagaaaatgaggtgttaaacatgcag
ctggcggatggagggcaaggagaagttcctgtggatgatatgaaactccatggcaaacct
gataaaactttacggttttcactctgtagtgataatctggagggaatatctgaaggtcca
tcaaaccgctcaaactctgtatcctctttggatttagaaggagagtctgtttcagagttg
ggagcaggaccttcagggagcaacggagttgatgctttgcagttgctagaacatgaacat
gcaaccactcaggacaatcttgatgataaactacgtaagtttgagattcgtgatatgatg
ggattaacagatgacagagacatttcggagacagtcagtgaaacctggagtactgatgtt
ttggggagtgattttgatccaaacatcgatgaagacagattacaagaaattgcaggtgca
gctgctgagaacatgctgggtagcctgttgtgtttgccaggaacaggaccaattctcctt
gacccctgtacaggatccaccatatcggagacaactagtgaagcttggagtgttgaggtg
cttcccagtgactcagaggcacctgacctaaagcaggaggaacgactacaggaattagaa
agttgttctggactaggcagcacatcagatgatacagatgtaagggaagttagttctcga
cccagcacaccaggactcagtgttgtatctggcattagtgcgacttcagaggatattccc
aacaaaattgaggatctccggtcagagtgcagttccgactttggaggaaaagattctgtg
accagtccagatatggatgaatctgctcatggaacacatcatttgacttctccaccctcc
cagacagagtctttgcttgcaatgtttgatccattgtcttctggtgaagcttcagttgct
ctgacagtggtcaggcctaaggtgcactatgcaagaccttctcatccaccccctgacccc
ccaattctagaaggagctgtagggggcaatgaggctagactgcctgtgtttggctcacat
gtatcagttcagacagaggctgatgctctaaaacaaaggcattcctaccccgagaggctg
gtacgcagcagaagctctgatatagtttcgacaggtcgaagaccaatgagtgaccccggt
tggaaccgacggtctgctaatgaagagaaggacttgtccgctggaagtagtggaactatt
gctggcctgaatgctactgctttacttcctgggccttcatcatctcccagtaaagattcc
ttaaagggagaggccgaagagaggaaagacagtgatgatgagaaatctgaccgaaacaag
ccctggtggaagaaacgttttgtgtctgcaatacctaaagccccaattgcctttcggaag
aaggagaagcatgaaaaagacaaggatgaccaagttcaagaaagatttccaaccatacca
gatgatactgttccgaggttaagtgcccaagctcaggctgctgaggatattctggataaa
tacagaaatatcaaacgtaccagccccagcgaaggggcaacaacagcttatgatggtgga
gaagttggtggagatggagagagtgtgcatgattctccacgggaggaagcgctacaaaac
atttcagcagatgatcttcctgattcggcaagccaagctgcccagcctcaagacacctct
ttctcctacagggatgctaagaagaaactgcgactagcgctttgttcagctgattcagtt
gcttttccaatgatgacccactctacaacaaggaatggattgccggaccacacagatcct
gaagacaatgaaatagtgtgtttcctgaaagtccagctggctgaagccattaacctgcag
gataaaaacctgatggcccagatccaggagaccatgcgctgcgtgagtcgctttgataac
aggacctgtcgcaagctgctgatatccattgcagaggattataggaaacgggctccatac
attgcctacttgacgcggtgtcgccagggactccaaactacacaagcacatctagaacgg
ctgctgcagagggtcctaagagacaaagaggtggccaacagatattttaccacagtttgc
gtgaggctgctgttggaaagccgagaaaaacagatattggaatttattcgtgattttcag
aatctcacagcagcagacgataagacagccctagtggaagatttcctgaagtctttgaat
ggagcaatggcgcaagatgtcatttggcagaatgcaagtgaagagcaactccaggatgca
cagatggcgattgagcgcagtgtgatgaatcgaatatttaaacttgctttctaccccaac
caggatggggatattcttcgagaccagcttttccaggaacacattcagcgtctctgtaaa
gttgtgacagcaaaccacagagcactccaaataccagaggtgtatctgaaggaggctcca
tggccatctgcacaggccgaaattcgaacaatcagcgcttacaagaccccaagggacaag
gttcagtgtattctacgaatgtgttccaccatcatgaatttgctgagcctggccaatgaa
gattcagtccctggggcagatgactttgtccctgttcttgtgtttgttctgattaaggct
aacccaccctgcctgctgtccactgttcagtacatcaataatttctatgctagccggctg
agtggagaagaatcctattggtggatgcagttcacagcagcagttgaattcattaaaacc
atcgacgatcgcaagtga
DBGET
integrated database retrieval system
