Latimeria chalumnae (coelacanth): 102359775
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Entry
102359775 CDS
T02913
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102359775 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102359775 (VCAM1)
04090 CD molecules [BR:
lcm04090
]
102359775 (VCAM1)
04091 Lectins [BR:
lcm04091
]
102359775 (VCAM1)
Cell adhesion molecules [BR:
lcm04515
]
Immunoglobulin superfamily
VCAM
102359775 (VCAM1)
CD molecules [BR:
lcm04090
]
Proteins
102359775 (VCAM1)
Lectins [BR:
lcm04091
]
I-type lectins (Siglecs)
102359775 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C1-set
C2-set
C2-set_2
ICAM_N
Ig_4
Motif
Other DBs
NCBI-GeneID:
102359775
NCBI-ProteinID:
XP_006000089
LinkDB
All DBs
Position
Un
AA seq
732 aa
AA seq
DB search
MANTHILGLVLILSTSAFAIKIELVPSQTKRYVPVGEPLMLMCKVTGCESPSFTWRTQLD
NPLGGKVNTRGPESNLTFSSVGVENEESYICTGYCGNSKLQKHVPVRVYSFSSDPVIETS
KPLVAGQKATLTCKIPKVYPSDFLEVTITKDGKIRKGQIDTSPIISTPSVSYEFTPQPED
DGKEISCEAYFDLEELQPELKTRRTTEKLNVHFAPTNTVISSSSSTVIEGDALTLTCTTE
SNPPARVVWQKQLPNGEFQQIAEYQNITIPEATYNDSGIYKCEVKNDIGTDAKETKVTIQ
ASAVNVELLPSETQVLAELGKPLVLTCKVTECESPTFSWKAQLDKPLGGKENVQGFESNL
TFSSVNKQNENSYTCMVTCDGRQKHKTVSVMVYSFSSDPVIEINSPLLTEQKATLTCRIS
DVYPLEFLEVKLLKDGAIIKEEFFHDKNLPEVVYEFIPKSEDAGKKVTCEAYFNGPQDTP
KKRSTTRELSVHFAPNGTNLLVFPYNTLKEGESAIISCSTHSFPAAKYILRKKSKAEVQV
IDHQNGTYKIDKVDINDEGTYECEASNDVGTEKRNTTVLVQVPPRNTTVSIYPSNEVTEG
ETVTITCKTYSKPPPKITFKKVEPGSGRITCFENGTFILYEVTQNDTGKYEIEVINDIGN
ETELIDIHVLERRTGIEDPPENVPVIVISIVATLGIVSSAIYIGYKVWQRKLSGTYNLVD
PSTAAKLTKSSV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacactcatatcttggggttagtacttatactttccacaagtgcttttgcaatc
aaaatagaattggtgccttcacaaacaaaacgttatgtccctgttggggagccgttaatg
ctgatgtgcaaagtaacaggatgtgaatccccatctttcacctggagaacccaactggat
aatccactgggaggaaaagttaacaccaggggacctgaatccaatttaacattttcatct
gttggggtagagaatgaagaatcatacatctgtactgggtactgtggaaactcaaagcta
cagaaacatgttccagttagagtttattctttttccagtgatccagtaattgaaacaagc
aaacccttggtagctggacagaaagccactcttacctgtaaaattccaaaggtttaccct
tctgacttcttggaagtgacaataaccaaagatggaaaaattcggaagggacaaattgat
acatccccgatcattagtacaccaagtgtttcttacgagttcacaccacaacctgaagat
gatggaaaagaaatcagctgtgaagcctactttgacctggaagagctacaacctgagctc
aagacaagaaggacaacagagaaactaaacgtgcactttgcacctacaaatacagtaatc
tcatcttcatcaagcacagtaatagaaggagatgcattgaccctcacttgtaccactgag
agtaatccacctgcaagagttgtgtggcaaaaacagctaccaaatggagaatttcagcaa
atcgcagaatatcaaaatattactattccagaagctacttacaatgattcaggaatatat
aaatgtgaagtaaaaaatgacattgggactgatgctaaggagacaaaagtcactatacaa
gcatctgcagtcaatgttgaattgctgccttcagagacacaagtgcttgctgagttggga
aagccactagtgctaacctgcaaagtaacagaatgtgaatccccaactttcagctggaaa
gcccagctggataagccactaggtggaaaagagaatgtccagggatttgaatccaactta
accttttcatcagttaacaagcagaatgaaaactcatatacttgcatggtgacttgtgat
ggcagacagaaacacaagacggtttcagtgatggtgtattcattttccagtgatccagtg
attgagataaacagtcccctgctaactgaacagaaagctacactcacctgtagaatttca
gatgtttaccctcttgaatttcttgaagtaaaattacttaaagatggagctataataaag
gaagaattttttcatgacaaaaacttacctgaagtggtttatgaattcatacctaaatct
gaagatgctggaaaaaaagttacctgtgaagcctattttaacggtccacaggatacaccc
aagaaaagatcaactacaagagaattaagtgtacattttgctcctaatggcacaaatctc
ttggtttttccatacaacactttgaaggaaggggaaagtgctattatttcttgctctacc
catagtttcccagctgcaaaatacatactgagaaagaaatcaaaagctgaagttcaagtg
attgaccatcaaaatggcacttacaagattgataaggttgatattaatgatgaggggacc
tatgaatgtgaagcatctaatgatgtagggactgaaaaaagaaacacaacagtccttgta
caagtgcctccacgaaatacgactgtgtcaatatatccatctaatgaagttacagagggg
gaaactgtaactataacgtgtaaaacctacagtaaaccacctccaaagatcacctttaaa
aaggttgagcctgggagtggaagaattacttgttttgaaaatggaaccttcattctgtat
gaagtaacacaaaatgacacaggcaaatatgaaattgaagtgattaatgacattgggaat
gagacagaacttatcgatatacacgttttggaaagaagaacaggaatagaagatccccca
gaaaatgtgcctgtaattgtcatcagtatagttgcaacattaggtatagtgtcatctgct
atatatataggatacaaagtatggcaaagaaaattaagtggaacatataatctagtggac
ccttcaacagctgcaaaactaacaaaaagttctgtttga
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