KEGG   Latimeria chalumnae (coelacanth): 102359923
Entry
102359923         CDS       T02913                                 
Symbol
BCAS2
Name
(RefSeq) BCAS2, pre-mRNA processing factor
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102359923 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102359923 (BCAS2)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102359923 (BCAS2)
Spliceosome [BR:lcm03041]
 Complex B
  Other components
   Prp19 complex
    102359923 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    102359923 (BCAS2)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102359923 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 Flagellar_rod EzrA INO80F Tup_N DUF4363 Mbeg1-like Cep57_CLD HALZ PRKG1_interact DUF3450 Wbp11
Other DBs
NCBI-GeneID: 102359923
NCBI-ProteinID: XP_005988512
Ensembl: ENSLACG00000018369
UniProt: H3BG84
LinkDB
Position
Un
AA seq 225 aa
MAGTSSVAGDVIVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDYAA
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNDDLVHMIESAQKDLQRLRKQIQDLNWQRKQEQLTAGSKLRE
MESNWVSLVSKNYEIERAIVQLENEISQLKQQHGEENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggtaccagctctgtggctggtgatgtgatcgtggatgctttgccttattttgac
cagggatatgacgccccgggagtccgagaagcggcagcagctttggtggaagaagagacc
aggagatacagaccgaccaagaactacctgagttacctacctacccctgactacgcagct
tttgagactgaaatcatgaggaacgagtttgaaaggttagcagcgcgacagccaatggag
ctccttagcatgaaaaggtacgagctgcccgctccctcttcaggtcagaagaatgacatc
accgcatggcaggagtgtgtgaacaactcgatggctcagttagagcatcaggcagttcga
attgagaacctagagctgatgtctcaacatgggtgtaatgcctggaaagtatataatgac
gatcttgttcacatgatagaatcggcacagaaggatctccaaaggctgagaaaacagatt
caggacctaaactggcagcgaaagcaggagcagctgacggcaggatccaaactacgagaa
atggaatcaaactgggtgtcccttgtcagcaagaattatgagattgaacgagcaattgta
cagctggagaatgaaatctctcagttaaaacagcagcatggggaggagaacaaagaaaac
attcgacaggacttctag

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