Latimeria chalumnae (coelacanth): 102360041
Help
Entry
102360041 CDS
T02913
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102360041 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102360041 (SMARCE1)
03021 Transcription machinery [BR:
lcm03021
]
102360041 (SMARCE1)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102360041 (SMARCE1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
102360041 (SMARCE1)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102360041 (SMARCE1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102360041 (SMARCE1)
PBAF complex
102360041 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Toxin_SdpC
MAPEG
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
102360041
NCBI-ProteinID:
XP_014346613
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MSKRPSYAPPPAPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDDEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFTSELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERAQSNAAAAAAAAAAAAAAAAATTTTAATAAAVTTTEEEQQGASKAEE
KKEEEAAATPMETDDVRPEESSDGQPNCEEGTSTPDDKESIQEGTDSIAEEGTTDSNTGS
ESTSAPTDEPPADPVPEEEKKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggccttcgtatgctccacctcccgccccagcccccacaacgcaaatgccc
agcaccccagggtttgtgggatacaacccttacagccatctggcctacaacaactacagg
ctgggaggtaacccgggcaccaacagccgggtcacggcttcctcaggaattaccattcca
aaaccacccaaacctccagacaagcctctgatgccttacatgagatacagtcgaaaggtc
tgggaccaagtcaaagcctccaaccctgacctgaagctgtgggagattggaaagattatt
ggtgggatgtggagagacctcaccgacgatgagaaacaggagtacttaaatgagtatgaa
gcagaaaagatcgagtacaacgagtctatgaaagcctaccacaactcgcctgcctacctc
gcttacatcaatgcaaaaagccgtgctgaagcggctctggaggaggagagccgccagagg
cagtcccgtatggagaaaggggagccctatatgagcatccagccggctgaggaccctgat
gattatgatgatgggttttccatgaaacatactgcgactgctcgtttccagagaaaccac
cgtcttatcagcgagattctcagcgagagcgtggtgccggatgtccgttctgttgtcacg
acggcccgcatgcaggttctcaagcgtcaggtgcagtccctcatggtccatcagcggaag
ctggaagctgagttactacagatcgaagagcgtcaccaagaaaagaaacggaagtttttg
gaaagcacagaatcctttaccagtgaactgaagaggctgtgcagtttgaaggtggaggtg
gacatggagaagattgcagctgaaatcgcgcaggcagaagagcaggctcgcaaacgtcag
gaggagagggagaaggaggccgcggagcaagctgagcgtgctcagagcaatgctgcggca
gcagctgctgcggccgccgccgccgctgctgctgccgccgccaccaccaccacagctgca
acagccgctgctgtaaccacgacggaggaggagcagcaaggggccagcaaagcagaggag
aagaaggaagaggaggcagcagctactcccatggagacagacgacgtgcgtccggaggag
tcttcagatggacagcctaactgcgaagaggggacttccaccccagatgacaaagagagc
atccaagagggaacagacagcattgctgaggagggaacgaccgacagtaacacggggtcg
gaaagcaccagcgcccccaccgatgaacctccggcagacccggtacctgaagaggagaag
aaagaatga
DBGET
integrated database retrieval system
