Latimeria chalumnae (coelacanth): 102360092
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Entry
102360092 CDS
T02913
Symbol
DENND4A
Name
(RefSeq) DENN domain containing 4A
KO
K20163
DENN domain-containing protein 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102360092 (DENND4A)
Membrane trafficking [BR:
lcm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102360092 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
102360092
NCBI-ProteinID:
XP_005990166
Ensembl:
ENSLACG00000012485
LinkDB
All DBs
Position
Un
AA seq
1954 aa
AA seq
DB search
MMEDKGLRVADYFVVAGLTDASKPLEEEIHFNDICHKIAKPKAPITDVAIVIKSLGEEVP
QGYTCVETTPTKLSADLNNGSLMGPQIHLCYKRGRDKPPLTDLGVLYEWRERLKQGCQII
QTTPYGRPANISGGTSSQRIYITYRRAPENMSQNSLALTDICIIIPSKGETPPHTFCKVD
KNLNSSMWGSAVFLCYKKSVAKTNTISYKAGLICRYPKEDYESFPLPESVPLFCLPMGAT
IECWPSNTKYPLPVFSTFVLTGASGEKVYGAAIQFYEPYFQENLTDKQRSQLGLVSAADR
KPLVSKTVHTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGNFTTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDMYD
PPPDVSCVDLDTNTISQTEEKKNLTWKILPKKACKNLINSLNNLYQQLAEMQQRPREDAL
MELVMNDYDVNSGAELHLIEMEIQEAFLCFMASILKGYRSYLRPITQAPSEKATDASSLF
DLQGFLKSRDRSHQKFYTMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFLERNAD
KGIKVDMERPDETRLIELDESHRSEHTVFITPPELPPLPDGEEYPLQYSYNGFPVLKLEL
FDRPESLLNSQNSRLASKVSCPSSPSPMFRRTKQEIKIAQKIAKKYSSIPQMWSKCLLRH
CYGLWFICLPAYLKVCHSKVRALRTAYDVLRKMQVKKLNPPDEVCYRVLMQLCGQYGQPV
LAVRVLFEMKKAGVQPNAITYGYYNKAVLESTWPSTNRGGYFLWMKIRNVILGLAQFKRA
LKKHSAAPQTPLSADGSDLDAVSHGSMDSSNDTNTVEQAPFSTDLIKVDSTDDRSSTGGQ
SDLGYNSLSKEEVRRGDNSAQYGQVEKETKKESDTSSLSEIESAKGSGDSIPQLECQEST
CTLKPTTSIVRLNCPFDNEDKVIVDSSGENAAGLLFTSSLDDSYEDGFMQSSSLRKRHKS
AVEPGLKQQMAWAGRNRNLSGDPVMGFMMNRGVDEPDPREIVEKLGADAKILSSAFQTIR
PNTLDIGKTAYNPKRSSQLNVERESSDEDTPFEILADKTDSPVIFDLEDLDNEPDPAKPI
KKHVPVPCRLHRSSSSSFALKPVERLDVETGFDPLSLLAAETDRQKEDEDERGISTPSAK
RDLAEEIEMYMNNMSSPLTSRTPSMDLQKSDDGRATSIKGPSVVKASRRSSLPPNSPRAP
ILTRSKTYDLKREGKSRDRLWSSPSFSPKSTRQECSPETAGTLALMSPTTFNLDTLLTPT
FDVLKSSMFSAGKGVAEKASKWYSKFSVYASSSKDQNVDRASISSAGVQDLESSSLLDED
VCNDGEVAASPQGNNTASNAKRIDQSRTSLESPTSQDAPSKQPSQIGSVQSTSSSFPLPD
KSDLGSSRCTSNTSIFQNYAMEVLISSCSRCRTCESLVYDEEIMAGWTADDSNLNSTCPF
CGSLFLPFLNIEIRDLRGPGRYFLKSSASVENMQIPQGVSADTEIRKPVVSPPDPGLFAS
PKITVQEVANTCSQQGYTCARSIEIPSERRRGNDESSFLSHPVARSVSTYGHIEQEHKGN
WRHHHAVPTGSLPTSFSESIDPLGFNWRLPSPESITVPYLSPLVVWKELESLLENEGDHG
ITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNWMSEDSKYVLV
QMLWDNLKLHRDPGQPFYILWNTQSLNCTLLFETQKSPMVHLRQENDGAFNREFLQNMVK
SIQMNDVYKPMSHILEIMSKRPSLKRQRSLYREILFLSLVALGKDSIDIDAFDREYKMAY
DRLTSNQVKLTQNCDRPPSTGVMECRKTFGEPYL
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggcctacgagttgctgattattttgttgtggcaggtttgactgat
gcttcaaaaccccttgaagaagagatccactttaatgatatttgccacaaaattgcaaaa
ccaaaagcaccgatcacagatgtcgccatagttattaagtctttaggagaagaagtgcca
caaggatacacatgtgtagagactactccaacaaaattgtcagcagacctcaacaatgga
agtcttatggggcctcaaatacacctttgctacaagagaggaagggataagcctccactt
acagatctgggagttctatatgaatggagagagaggttaaaacagggctgtcagataatt
caaacaactccttatggccgtccagcaaatattagtggtggtacttcttcacaaagaata
tatatcacttaccgaagagccccagaaaacatgtcccagaattctctggccctcacagat
atatgcataataattccgagcaaaggagaaaccccaccacacacattctgcaaagttgac
aaaaatctcaacagtagtatgtggggatctgcagtttttctgtgttacaaaaaatctgtg
gcaaagacaaatactatatcttataaggctggtttaatatgtagatatcctaaagaagat
tatgaatcattccctttaccagagtctgtgcctctattttgtttgcccatgggtgcaaca
attgagtgttggccgtcaaatacaaaatatccactacctgttttttcaacatttgttcta
acaggggcctcaggtgagaaggtgtatggtgctgccatccagttttatgaaccctatttc
caggagaatttaacagacaagcaacgctctcagttgggtttagttagtgctgcggacagg
aaacccctagtttcaaaaacagttcacactaacaagtgcatctgtctgctgtctcactgg
ccattctttgatgcgttcaaaaagtttcttacattcctgtaccgatactctatctctgga
cctcatgtactgcctattgaaaaacacatttctcacttcatgcacaaagttccttttccc
tctcctcaaagaccaagaattttagtacagttgtcaccacatgataacttgatactcagc
cagcctgtgtcttcaccactaccactaagtggaggtaattttacaacactgctgcagaac
ctgggtcccgagaatgcagttacgctactagtgtttgcagtgactgaacacaaaatcctt
atccactcgttacggccagctgtacttaccagtgtgaccgaggcattagtttctatgatt
tttcctttccactggccctgcccgtatattcctctttgtcctttggcacttgctgatgtg
ctgagtgccccgtgtccatttatagttggggttgattcacgatattttgatatgtatgat
ccacctcctgatgtaagctgtgttgacttggacaccaacactatttcccaaactgaagag
aagaagaacctgacatggaaaattctaccaaagaaagcgtgtaaaaacttgatcaattct
ttaaataacctctatcagcagctggcagaaatgcagcaaaggccaagagaagatgcacta
atggaattagtaatgaatgactatgatgttaactctggggcagaattacatttgatagaa
atggagatccaagaggcatttctttgttttatggcctccattttaaagggttataggtct
taccttcgaccaatcacacaagccccttctgagaaagctactgatgctagttcattattt
gatctacagggattcctgaaaagtcgtgatcgttcacatcaaaagttttacactatgatg
accaaaacacagatgttcattcgttttattgaggaatgttcctttgtgagtgataaggat
gcaagcctggcattctttgatgattgtgtagataaacttttcttagaaagaaatgcagac
aaaggcataaaggtggatatggaaaggccagatgaaacacgattaatagaactggatgag
tcacataggagcgagcacactgtttttatcactccccctgagcttccaccattaccagat
ggagaagagtatccattacagtacagctataatggatttcctgtgctgaagcttgagctc
tttgataggcctgagagtttgctgaattctcagaatagcagacttgcctcaaaggtcagc
tgtccaagcagtccatctcccatgttcaggagaacaaagcaggaaattaaaatagcccag
aaaatagcaaagaaatattcttccattcctcagatgtggtccaaatgtctgctacgacac
tgttatggcctctggtttatttgtctgcctgcataccttaaagtatgccattcaaaggtc
agggctctaaggactgcctatgatgtgcttaggaaaatgcaagtcaagaaattaaatcct
cctgatgaggtatgctatcgagttctgatgcaactgtgtggccagtatggacagccggtg
ttggcagtacgagttctatttgaaatgaaaaaagctggggttcaacctaatgccatcaca
tatggttactataataaggctgttttagaaagcacctggccttcaactaatagaggtggt
tactttttgtggatgaaaataagaaatgtcattttagggttagcacagttcaaaagagct
ttgaaaaagcattcagctgcaccacaaactcccttgtcagcagatgggagtgacttggat
gctgtcagtcacggcagtatggatagctctaatgacactaacactgtggaacaagcacca
ttcagcactgatttaatcaaagtagattctaccgatgatagatctagtacaggtggccaa
tcagaccttggatacaactctttatctaaagaagaggttcgacgaggagacaattctgct
cagtatgggcaagtagaaaaggaaaccaaaaaagaaagtgacaccagttcgttgtcagag
attgagagtgcaaagggtagtggtgacagcattcctcagctggagtgccaagaatcaacg
tgtactttgaaacctaccaccagtattgtgcgacttaattgtccctttgataatgaggat
aaagtcattgttgacagcagtggtgaaaatgctgctggattactgtttacttcatcactt
gatgacagttatgaagatggctttatgcagagcagtagtttaaggaagagacacaaaagt
gcagtggagcctggcttgaaacaacagatggcttgggcgggcaggaaccgcaaccttagt
ggagatccagttatgggatttatgatgaatagaggtgtggatgagcccgatcctagagag
attgttgaaaaattaggagctgatgccaaaattctttcaagtgcatttcagaccattagg
cctaatacactagatattggtaaaactgcttataaccccaagaggtccagtcagttaaat
gtggagagggaatccagtgatgaagacacaccatttgaaattttggcagacaaaaccgac
tcacctgtgatatttgatttggaagacttagacaatgaacccgacccagcaaaacccata
aagaaacacgttccagtgccctgcaggttacacaggagtagtagcagtagctttgcttta
aaaccagtggaaagattggatgttgagacagggtttgatccactctcactgttagctgca
gagacagatcgacaaaaagaagatgaggatgagagaggcatttccacaccctcagcaaag
cgagatctggcagaagaaattgaaatgtacatgaacaacatgagtagtcctttaactagt
cgcactcctagtatggacttgcaaaaatcggatgatggtagggcaaccagcatcaaaggg
ccatctgtagtaaaggcatctagaagatctagtcttccaccaaactcacctagagcacct
attcttactagatctaagacctatgacttaaagagagaaggaaagtcaagggacagactt
tggtcctctccatctttttctccaaaaagtactagacaggaatgctcaccagagacagct
gggacattagcactgatgtcacccaccacattcaacttagatacattgttaacacctaca
tttgacgtgctaaaaagtagcatgttttctgctgggaaaggagtggctgaaaaagctagc
aaatggtattctaaattttcagtatatgcctcatcctccaaggatcaaaacgtagacaga
gctagtatttcttctgctggggtacaggatctagaatcctcctcattactggatgaagat
gtttgtaatgatggtgaagtagcagcatctcctcaaggaaataacactgcttcaaatgcc
aagagaatagatcaaagccggacaagcctagagagccctaccagtcaggatgccccatca
aaacagccaagtcagattggtagtgtacagtcaactagttcaagcttcccgctacctgac
aaatcagaccttggatcttctcgctgtaccagcaacacaagtatcttccaaaattatgcc
atggaggttctgatctcaagctgttctcggtgtcgaacatgtgagagtcttgtgtatgat
gaagagatcatggcaggctggacggcggatgattccaacctcaactccacatgtcctttt
tgtggcagtctgttcctgccttttttgaatattgaaatccgagatctgcgtggacctggc
aggtattttctaaagtccagcgcatctgttgagaacatgcagatcccacagggtgtttca
gctgacacagagatcagaaaacctgttgtctctcctcctgatccaggtctttttgcatca
cctaaaatcactgtacaagaagttgctaacacatgcagccaacaaggttacacttgtgcc
agaagcattgagattccatcagaaaggagacgggggaatgatgaatcaagttttctcagc
cacccagtagcacgaagtgttagcacatatggtcatattgagcaggagcataaaggcaat
tggaggcaccaccacgctgttcccacaggaagcttgccgactagtttcagtgaatccata
gatcctttaggttttaattggcgactccctagtccagaatctatcacagtcccttacctg
agccctcttgtggtatggaaagaacttgaaagcttactggaaaatgaaggggatcacgga
ataactgtggcagattttgtggaccatcacccaattgtattctggaatttggtgtggtac
ttcaggcgtcttgatctgcctagcaacttaccaggattaatattgtcctcagagcactgt
aataaaaattcaaagattcctcgaaactggatgtctgaagacagtaaatatgttctagtt
caaatgctatgggataatttaaagttgcatcgggatccaggacaacccttctatattctg
tggaacacccagagtctaaattgtactcttttgtttgagactcagaaatcgcccatggtt
cacttacggcaagaaaacgatggagcatttaacagagaatttttgcagaacatggtgaag
agtattcagatgaatgatgtgtacaagccaatgagtcatatcttagaaatcatgagcaaa
cgacctagcctgaaacgacaaaggagtttatacagagaaatcttgttcctctcacttgtt
gctttgggaaaagacagtattgatattgatgcatttgacagagagtacaaaatggcttat
gaccgtcttacatcaaatcaggtcaaattaacgcagaactgtgatcgacccccaagcact
ggagtgatggagtgccgcaagacatttggagagccctatctttaa
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integrated database retrieval system