KEGG   Latimeria chalumnae (coelacanth): 102360092
Entry
102360092         CDS       T02913                                 
Symbol
DENND4A
Name
(RefSeq) DENN domain containing 4A
  KO
K20163  DENN domain-containing protein 4
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102360092 (DENND4A)
Membrane trafficking [BR:lcm04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    102360092 (DENND4A)
SSDB
Motif
Pfam: DENN uDENN dDENN PPR_2 PPR_3 DUF2464 PPR_long PPR
Other DBs
NCBI-GeneID: 102360092
NCBI-ProteinID: XP_005990166
Ensembl: ENSLACG00000012485
LinkDB
Position
Un
AA seq 1954 aa
MMEDKGLRVADYFVVAGLTDASKPLEEEIHFNDICHKIAKPKAPITDVAIVIKSLGEEVP
QGYTCVETTPTKLSADLNNGSLMGPQIHLCYKRGRDKPPLTDLGVLYEWRERLKQGCQII
QTTPYGRPANISGGTSSQRIYITYRRAPENMSQNSLALTDICIIIPSKGETPPHTFCKVD
KNLNSSMWGSAVFLCYKKSVAKTNTISYKAGLICRYPKEDYESFPLPESVPLFCLPMGAT
IECWPSNTKYPLPVFSTFVLTGASGEKVYGAAIQFYEPYFQENLTDKQRSQLGLVSAADR
KPLVSKTVHTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGNFTTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDMYD
PPPDVSCVDLDTNTISQTEEKKNLTWKILPKKACKNLINSLNNLYQQLAEMQQRPREDAL
MELVMNDYDVNSGAELHLIEMEIQEAFLCFMASILKGYRSYLRPITQAPSEKATDASSLF
DLQGFLKSRDRSHQKFYTMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFLERNAD
KGIKVDMERPDETRLIELDESHRSEHTVFITPPELPPLPDGEEYPLQYSYNGFPVLKLEL
FDRPESLLNSQNSRLASKVSCPSSPSPMFRRTKQEIKIAQKIAKKYSSIPQMWSKCLLRH
CYGLWFICLPAYLKVCHSKVRALRTAYDVLRKMQVKKLNPPDEVCYRVLMQLCGQYGQPV
LAVRVLFEMKKAGVQPNAITYGYYNKAVLESTWPSTNRGGYFLWMKIRNVILGLAQFKRA
LKKHSAAPQTPLSADGSDLDAVSHGSMDSSNDTNTVEQAPFSTDLIKVDSTDDRSSTGGQ
SDLGYNSLSKEEVRRGDNSAQYGQVEKETKKESDTSSLSEIESAKGSGDSIPQLECQEST
CTLKPTTSIVRLNCPFDNEDKVIVDSSGENAAGLLFTSSLDDSYEDGFMQSSSLRKRHKS
AVEPGLKQQMAWAGRNRNLSGDPVMGFMMNRGVDEPDPREIVEKLGADAKILSSAFQTIR
PNTLDIGKTAYNPKRSSQLNVERESSDEDTPFEILADKTDSPVIFDLEDLDNEPDPAKPI
KKHVPVPCRLHRSSSSSFALKPVERLDVETGFDPLSLLAAETDRQKEDEDERGISTPSAK
RDLAEEIEMYMNNMSSPLTSRTPSMDLQKSDDGRATSIKGPSVVKASRRSSLPPNSPRAP
ILTRSKTYDLKREGKSRDRLWSSPSFSPKSTRQECSPETAGTLALMSPTTFNLDTLLTPT
FDVLKSSMFSAGKGVAEKASKWYSKFSVYASSSKDQNVDRASISSAGVQDLESSSLLDED
VCNDGEVAASPQGNNTASNAKRIDQSRTSLESPTSQDAPSKQPSQIGSVQSTSSSFPLPD
KSDLGSSRCTSNTSIFQNYAMEVLISSCSRCRTCESLVYDEEIMAGWTADDSNLNSTCPF
CGSLFLPFLNIEIRDLRGPGRYFLKSSASVENMQIPQGVSADTEIRKPVVSPPDPGLFAS
PKITVQEVANTCSQQGYTCARSIEIPSERRRGNDESSFLSHPVARSVSTYGHIEQEHKGN
WRHHHAVPTGSLPTSFSESIDPLGFNWRLPSPESITVPYLSPLVVWKELESLLENEGDHG
ITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNWMSEDSKYVLV
QMLWDNLKLHRDPGQPFYILWNTQSLNCTLLFETQKSPMVHLRQENDGAFNREFLQNMVK
SIQMNDVYKPMSHILEIMSKRPSLKRQRSLYREILFLSLVALGKDSIDIDAFDREYKMAY
DRLTSNQVKLTQNCDRPPSTGVMECRKTFGEPYL
NT seq 5865 nt   +upstreamnt  +downstreamnt
atgatggaagacaaaggcctacgagttgctgattattttgttgtggcaggtttgactgat
gcttcaaaaccccttgaagaagagatccactttaatgatatttgccacaaaattgcaaaa
ccaaaagcaccgatcacagatgtcgccatagttattaagtctttaggagaagaagtgcca
caaggatacacatgtgtagagactactccaacaaaattgtcagcagacctcaacaatgga
agtcttatggggcctcaaatacacctttgctacaagagaggaagggataagcctccactt
acagatctgggagttctatatgaatggagagagaggttaaaacagggctgtcagataatt
caaacaactccttatggccgtccagcaaatattagtggtggtacttcttcacaaagaata
tatatcacttaccgaagagccccagaaaacatgtcccagaattctctggccctcacagat
atatgcataataattccgagcaaaggagaaaccccaccacacacattctgcaaagttgac
aaaaatctcaacagtagtatgtggggatctgcagtttttctgtgttacaaaaaatctgtg
gcaaagacaaatactatatcttataaggctggtttaatatgtagatatcctaaagaagat
tatgaatcattccctttaccagagtctgtgcctctattttgtttgcccatgggtgcaaca
attgagtgttggccgtcaaatacaaaatatccactacctgttttttcaacatttgttcta
acaggggcctcaggtgagaaggtgtatggtgctgccatccagttttatgaaccctatttc
caggagaatttaacagacaagcaacgctctcagttgggtttagttagtgctgcggacagg
aaacccctagtttcaaaaacagttcacactaacaagtgcatctgtctgctgtctcactgg
ccattctttgatgcgttcaaaaagtttcttacattcctgtaccgatactctatctctgga
cctcatgtactgcctattgaaaaacacatttctcacttcatgcacaaagttccttttccc
tctcctcaaagaccaagaattttagtacagttgtcaccacatgataacttgatactcagc
cagcctgtgtcttcaccactaccactaagtggaggtaattttacaacactgctgcagaac
ctgggtcccgagaatgcagttacgctactagtgtttgcagtgactgaacacaaaatcctt
atccactcgttacggccagctgtacttaccagtgtgaccgaggcattagtttctatgatt
tttcctttccactggccctgcccgtatattcctctttgtcctttggcacttgctgatgtg
ctgagtgccccgtgtccatttatagttggggttgattcacgatattttgatatgtatgat
ccacctcctgatgtaagctgtgttgacttggacaccaacactatttcccaaactgaagag
aagaagaacctgacatggaaaattctaccaaagaaagcgtgtaaaaacttgatcaattct
ttaaataacctctatcagcagctggcagaaatgcagcaaaggccaagagaagatgcacta
atggaattagtaatgaatgactatgatgttaactctggggcagaattacatttgatagaa
atggagatccaagaggcatttctttgttttatggcctccattttaaagggttataggtct
taccttcgaccaatcacacaagccccttctgagaaagctactgatgctagttcattattt
gatctacagggattcctgaaaagtcgtgatcgttcacatcaaaagttttacactatgatg
accaaaacacagatgttcattcgttttattgaggaatgttcctttgtgagtgataaggat
gcaagcctggcattctttgatgattgtgtagataaacttttcttagaaagaaatgcagac
aaaggcataaaggtggatatggaaaggccagatgaaacacgattaatagaactggatgag
tcacataggagcgagcacactgtttttatcactccccctgagcttccaccattaccagat
ggagaagagtatccattacagtacagctataatggatttcctgtgctgaagcttgagctc
tttgataggcctgagagtttgctgaattctcagaatagcagacttgcctcaaaggtcagc
tgtccaagcagtccatctcccatgttcaggagaacaaagcaggaaattaaaatagcccag
aaaatagcaaagaaatattcttccattcctcagatgtggtccaaatgtctgctacgacac
tgttatggcctctggtttatttgtctgcctgcataccttaaagtatgccattcaaaggtc
agggctctaaggactgcctatgatgtgcttaggaaaatgcaagtcaagaaattaaatcct
cctgatgaggtatgctatcgagttctgatgcaactgtgtggccagtatggacagccggtg
ttggcagtacgagttctatttgaaatgaaaaaagctggggttcaacctaatgccatcaca
tatggttactataataaggctgttttagaaagcacctggccttcaactaatagaggtggt
tactttttgtggatgaaaataagaaatgtcattttagggttagcacagttcaaaagagct
ttgaaaaagcattcagctgcaccacaaactcccttgtcagcagatgggagtgacttggat
gctgtcagtcacggcagtatggatagctctaatgacactaacactgtggaacaagcacca
ttcagcactgatttaatcaaagtagattctaccgatgatagatctagtacaggtggccaa
tcagaccttggatacaactctttatctaaagaagaggttcgacgaggagacaattctgct
cagtatgggcaagtagaaaaggaaaccaaaaaagaaagtgacaccagttcgttgtcagag
attgagagtgcaaagggtagtggtgacagcattcctcagctggagtgccaagaatcaacg
tgtactttgaaacctaccaccagtattgtgcgacttaattgtccctttgataatgaggat
aaagtcattgttgacagcagtggtgaaaatgctgctggattactgtttacttcatcactt
gatgacagttatgaagatggctttatgcagagcagtagtttaaggaagagacacaaaagt
gcagtggagcctggcttgaaacaacagatggcttgggcgggcaggaaccgcaaccttagt
ggagatccagttatgggatttatgatgaatagaggtgtggatgagcccgatcctagagag
attgttgaaaaattaggagctgatgccaaaattctttcaagtgcatttcagaccattagg
cctaatacactagatattggtaaaactgcttataaccccaagaggtccagtcagttaaat
gtggagagggaatccagtgatgaagacacaccatttgaaattttggcagacaaaaccgac
tcacctgtgatatttgatttggaagacttagacaatgaacccgacccagcaaaacccata
aagaaacacgttccagtgccctgcaggttacacaggagtagtagcagtagctttgcttta
aaaccagtggaaagattggatgttgagacagggtttgatccactctcactgttagctgca
gagacagatcgacaaaaagaagatgaggatgagagaggcatttccacaccctcagcaaag
cgagatctggcagaagaaattgaaatgtacatgaacaacatgagtagtcctttaactagt
cgcactcctagtatggacttgcaaaaatcggatgatggtagggcaaccagcatcaaaggg
ccatctgtagtaaaggcatctagaagatctagtcttccaccaaactcacctagagcacct
attcttactagatctaagacctatgacttaaagagagaaggaaagtcaagggacagactt
tggtcctctccatctttttctccaaaaagtactagacaggaatgctcaccagagacagct
gggacattagcactgatgtcacccaccacattcaacttagatacattgttaacacctaca
tttgacgtgctaaaaagtagcatgttttctgctgggaaaggagtggctgaaaaagctagc
aaatggtattctaaattttcagtatatgcctcatcctccaaggatcaaaacgtagacaga
gctagtatttcttctgctggggtacaggatctagaatcctcctcattactggatgaagat
gtttgtaatgatggtgaagtagcagcatctcctcaaggaaataacactgcttcaaatgcc
aagagaatagatcaaagccggacaagcctagagagccctaccagtcaggatgccccatca
aaacagccaagtcagattggtagtgtacagtcaactagttcaagcttcccgctacctgac
aaatcagaccttggatcttctcgctgtaccagcaacacaagtatcttccaaaattatgcc
atggaggttctgatctcaagctgttctcggtgtcgaacatgtgagagtcttgtgtatgat
gaagagatcatggcaggctggacggcggatgattccaacctcaactccacatgtcctttt
tgtggcagtctgttcctgccttttttgaatattgaaatccgagatctgcgtggacctggc
aggtattttctaaagtccagcgcatctgttgagaacatgcagatcccacagggtgtttca
gctgacacagagatcagaaaacctgttgtctctcctcctgatccaggtctttttgcatca
cctaaaatcactgtacaagaagttgctaacacatgcagccaacaaggttacacttgtgcc
agaagcattgagattccatcagaaaggagacgggggaatgatgaatcaagttttctcagc
cacccagtagcacgaagtgttagcacatatggtcatattgagcaggagcataaaggcaat
tggaggcaccaccacgctgttcccacaggaagcttgccgactagtttcagtgaatccata
gatcctttaggttttaattggcgactccctagtccagaatctatcacagtcccttacctg
agccctcttgtggtatggaaagaacttgaaagcttactggaaaatgaaggggatcacgga
ataactgtggcagattttgtggaccatcacccaattgtattctggaatttggtgtggtac
ttcaggcgtcttgatctgcctagcaacttaccaggattaatattgtcctcagagcactgt
aataaaaattcaaagattcctcgaaactggatgtctgaagacagtaaatatgttctagtt
caaatgctatgggataatttaaagttgcatcgggatccaggacaacccttctatattctg
tggaacacccagagtctaaattgtactcttttgtttgagactcagaaatcgcccatggtt
cacttacggcaagaaaacgatggagcatttaacagagaatttttgcagaacatggtgaag
agtattcagatgaatgatgtgtacaagccaatgagtcatatcttagaaatcatgagcaaa
cgacctagcctgaaacgacaaaggagtttatacagagaaatcttgttcctctcacttgtt
gctttgggaaaagacagtattgatattgatgcatttgacagagagtacaaaatggcttat
gaccgtcttacatcaaatcaggtcaaattaacgcagaactgtgatcgacccccaagcact
ggagtgatggagtgccgcaagacatttggagagccctatctttaa

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