Latimeria chalumnae (coelacanth): 102360437
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Entry
102360437 CDS
T02913
Symbol
NUP153
Name
(RefSeq) nucleoporin 153
KO
K14296
nuclear pore complex protein Nup153
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
lcm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102360437 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102360437 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102360437 (NUP153)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102360437 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
102360437
NCBI-ProteinID:
XP_014350513
LinkDB
All DBs
Position
Un
AA seq
1405 aa
AA seq
DB search
MGSHADGSSRKRLRLTACGAAVGTIGGLWQQRIFFNEGILGRVTDTVKSIVPGWLQRYFR
QNDDTVLASEEDGEHTEGRETLVNNRVCPSNENGAFADGRGTPEPTTSDADEPSTGRSEL
NFSDVSMRPAIYRSHIHFSVFDSPTLPCQPSTSTAYPIGSSGFSLVKEIKDSTSQHEDDN
ISTTSGFSSRASDKVCTVIHLPCADIIYLLQMADRTAFEILDFQAKRKRHDSQYPPVQKL
LTPKAVSIATNRSFYIKPSLTPTGQTNKTTERTESRHREIREKTSEVNNAPVEPPKSSGT
NSYSYPTFSTPAANGLLPGGGKMKRERGAHFTAKQSQEEQVEVLDLPRISLPISTASLPT
FNFSPSTTASTPASVTKSAVSKAQLSNSSTASSPAFTFSSPIVKSTEADLPPFAPSMGFT
FSIPVAKTASLAASTGVSAVPVFSTERDTTSPLPSTATPVSKNREEDFEGPFKPAKALKQ
GSVLDILKEPDFVSPPSSLSMTTSTPAPSKHEVAVTKMGFSSSGFGESFKPAAGSWYCDT
CLVQNKGTDSKCVACQASKPAPTESAPQIRTFTLAGSGSGGGSSSSKSVPPSTGISVGFG
DKFKHAPGTWECDTCLVQNKPEVTKCVACETPKPGTGVMPALTLPVVTENTTVTCSLTST
TPGTTSSGLTFGDIFKKPEGAWNCDECLVQNKAEDSKCVACQHSKPGSTAAITPSVSTPA
PTGFGDKFKKPQGSWDCEVCLVQNRAEEVKCVACECAKPGAQAELKGFGSSASSTASSSF
NFGIQSSVSDSSVTSGFKFGDQSGFKFGASSTDPNSSKDTAAGGFKCDKLAGGFKFGTGS
FETKAPEGNEKERSQSASTGFTFGLPSATSSQSLTAFKFGAPSRGQPDKKEETTSKPVLG
GFQFGTPAASTATGAAAAAPDKEAAGGFKFVSVEKSETAASFTFSRAEEKTDGAAPAGVA
FGNPERQKEASAASAPTPASSFAFGKAEDKLDSVTSTSFMFGKRKGTEEPKLQPQIEFSF
SKPEQAKEKGKLPSLFETPKPSYNFSFEKPAETQEVASQPKPVFAFGASVASTTDQSAAK
PTFSFLTGGSSSTAAPSTAAITTGAAAAATITTTSTTTTTTSSSSSSSSSSSSTFGSSAS
TTIPQTAAFVFGQTNSTGSTPAFGGAVDSAAPKQFVFGSQESKPAAATSNTGAAVAPFVF
GAGASGNTTPSGFTFATSGPAAASTGGPSASTFVFGSGSAAAAAPAALPAFGASQAQAFG
QSSSQQSAPAFGGVAAVAAAAAATLFSAGSQPPAFGSVSSSSQPAVFGQQANPQPAFGAS
AAPLNSSGGFQFGANNAGYNFSGTNPSGVFTFGSNSGGSSAPAAPGSAVGFQFNQPAFTV
GAVGKTPGQHSISGRKIKTAIRRRK
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtcacgcagatggatcctcaagaaagaggctgaggttaactgcatgtggagct
gccgttggcaccatcggaggcctctggcaacaaagaatattcttcaatgagggaatcctt
ggcagagttactgacactgtgaagagcatcgtaccagggtggttacagaggtacttcaga
cagaatgatgacaccgtcctggccagtgaagaggatggtgagcacacagagggtcgggaa
accctggtgaacaatcgggtttgtccaagcaatgaaaatggcgcattcgctgatgggaga
ggcactcctgagcctacaaccagtgacgcagatgagccatctacaggtagatcagagtta
aatttctcagatgtttctatgaggccggctatctatcgaagtcatattcatttttctgtt
tttgattcgccgacgcttccctgtcaaccatccacatccacagcttaccccattggcagc
tcaggattctcactagttaaggaaatcaaagactctacctctcagcatgaagatgataac
atctccacgacgagtggcttttcttcaagagcatctgataaggtgtgcactgtgattcac
ttgccctgtgctgatatcatttatcttttacagatggctgatagaactgcttttgaaatc
ctggatttccaggccaaaaggaaacggcatgactcccagtatcctcctgttcagaagctt
ctgaccccgaaggctgtttctatagctacaaacagatccttttacattaaaccgtcactt
acgcccactggccagaccaacaagacaacagagagaacggagtccagacacagagagatc
agagagaaaacgtcagaggtcaataatgcaccagtggaaccaccaaagagttccggtacc
aacagttattcttacccgaccttcagcactcctgctgccaatgggctgttaccaggtggt
gggaagatgaaaagagagcggggagcacacttcacagccaaacagtcacaggaggaacag
gtggaagtcctggatctgcccagaatttctctacctatcagtactgcttcactgcccacc
ttcaacttctctccttcaaccactgcatccactccagcatctgttacaaaatcagctgtc
agcaaggcacagctatccaactcctcaactgctagcagcccagcttttaccttttcctct
ccgattgtaaagtcaacagaagcagatctcccaccttttgcaccatccatgggatttact
tttagtattcctgttgccaaaactgcaagtcttgctgcttctactggcgtatcagctgtc
cctgtgttcagcacagaaagggacactacttctccattaccatccacagctacaccagtg
agtaaaaacagagaagaggactttgagggtccattcaagcctgctaaagcgttgaagcag
ggcagtgtactggacatcctgaaagagcctgactttgtttcacctccgtcttctctgtcg
atgactaccagcaccccggcaccttcaaaacatgaagtagctgttacaaagatgggcttt
tcatctagtgggtttggggagagttttaagcccgccgcaggatcctggtattgtgacacc
tgcctcgtacaaaacaaaggaacggacagcaaatgtgttgcatgccaggcgtccaaaccg
gcccccacagagtcagcaccacagattagaactttcactcttgctggcagtggtagtggt
ggtgggagcagcagcagcaaatcagtgccaccctctacagggatttcagtgggttttgga
gacaagttcaaacatgcacctgggacttgggaatgtgacacttgtttagtgcagaataag
cctgaagttacaaagtgcgtggcttgtgagactccaaagcctgggactggagtgatgcct
gccctgactttgccggtggtcacggagaacaccacagtgacctgttcattgactagtacg
accccgggcaccacgtcttcaggactgacttttggagacatattcaaaaaacctgaaggt
gcatggaattgtgatgagtgtcttgtgcagaataaggcagaagatagtaagtgtgttgcc
tgccagcatagtaaaccaggatctacggctgctataacacccagcgtatctactcctgcc
ccaacaggatttggagacaagtttaaaaaaccccaaggcagctgggattgtgaagtgtgt
ttagtacagaacagagctgaagaagtcaaatgtgtggcttgtgagtgtgcaaagccaggc
gcccaggcagaactgaaagggtttggctcttctgcgtcttcgactgcttcttcatccttt
aactttgggattcagtcttctgtatcggactcgtctgtaacaagtgggtttaagtttggt
gaccagagtgggtttaaattcggagcctcgtcaacggacccaaactcatcgaaggacact
gccgctggaggatttaaatgcgacaaactcgctgggggctttaagtttggaactggctca
tttgaaacaaaagcacctgaagggaatgaaaaggagcgttcccaaagtgccagtactggc
ttcacctttgggctaccctctgccaccagtagccagtctttgactgcattcaagtttgga
gccccaagcagggggcagccagacaaaaaagaggagacgacgagcaagccagtcctgggg
ggtttccagtttgggacacctgcagcttcaacggcgactggcgctgccgcagcagcaccc
gacaaggaagcagcggggggcttcaagtttgtctcggtggaaaagagcgaaacagcagcc
tcttttacgttcagccgggccgaggagaagactgacggagcagcgcctgcgggagttgcc
tttggaaaccccgagcggcagaaggaagcgtcggctgccagcgctcccaccccggcctcc
tcgttcgcattcggaaaggccgaggacaagctggactcggtcacctccacctcgtttatg
tttggaaagaggaaaggcaccgaggagccaaagctgcagccccagattgagttctccttc
agcaaacctgagcaggccaaagagaagggtaagctgccctctttgtttgaaacccccaag
ccctcgtataacttcagcttcgagaaaccggcagagacgcaggaggtggcatcccagccc
aagccagtgtttgcgtttggggcttctgttgcaagcacgacagaccagtctgccgccaag
ccgaccttcagtttcctgacgggtggttcctcttctacagcagctccgagcactgctgcc
attactactggagctgccgctgccgccaccatcaccaccacctccaccaccaccaccacc
acctcctcctcctcttcctcttcctcctcctcctccagcacgtttggcagctctgcctcc
acaaccatccctcagacagctgccttcgtcttcggacagactaacagcaccgggagcact
cctgccttcggtggcgcggtggattccgctgcacccaaacagtttgtctttggctctcag
gagagcaagcctgcggctgccacttcaaatacaggagcagcggttgccccgtttgtcttc
ggtgctggtgccagcggcaacactacgccctctggtttcactttcgccacctctggtcca
gcagccgcgtctacaggtggcccctcggcttctacgtttgtttttggatcaggatctgca
gcagcagcagcacctgccgctcttccagcgtttggtgccagccaggcgcaagcgtttggc
cagagctccagccagcagagtgccccagccttcgggggggtggcggcggtggcggcggca
gcggcggctacattattctcagctgggtcccagcctccagcttttggctctgtgtccagt
agcagccagcctgctgtcttcggacagcaggccaatccccagcctgcatttggcgccagt
gcagcacctttgaactccagtggtggcttccagtttggagccaacaacgctggttataac
ttcagtggcaccaatccaagtggggtctttacatttggctcaaattctgggggctcgtct
gcaccggcagcaccagggtcagcagttggatttcagttcaaccagccagcttttactgtg
ggggctgttggaaagactcctggacagcactcaatttctggccgcaagataaagactgct
attagacgcaggaaataa
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