Latimeria chalumnae (coelacanth): 102360493
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Entry
102360493 CDS
T02913
Symbol
TAF1B
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102360493 (TAF1B)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102360493 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Fe_dep_repr_C
Motif
Other DBs
NCBI-GeneID:
102360493
NCBI-ProteinID:
XP_005998737
Ensembl:
ENSLACG00000007241
UniProt:
H3AEV7
LinkDB
All DBs
Position
Un
AA seq
584 aa
AA seq
DB search
MDEEETRDYKDPCLQCSDINWGISDEGKFYCKSCHNVIEKTKECAESEVFMHYAKAFSIS
RGLKNKRKLDKSCEWYVCEGFQFILKQQAESLLSLGVCSQIKDEIICNFWRRYLQKSRQA
YTSKQLPQYARPESNSECSTEWESEPESLNLSNWSLASESEPVTCHSDSSLAQESSCGKT
STLETASICSGSIDGREHMSANRRGKLVMTMPMTLAFCYMALLWLREPLTLADLLRLVAE
DHIPYINTYQFFPEEVKLFGVDLRIFKVQSVPSYEKIQETMRRLALFLDLPQFPQVTETC
FLHPDMLCIKYLMEANLPDEVHNWTCKVVKKTGVGESAFLTFDPLQKQRTNGYELQAAAV
IVVTLKLLFLLDDKYEWMMSNLAEELNEDAVDMKYFEFRKWCKTMKSCLNEAEKKVEEDA
TRHLWVCDKLLYSTSKEKPLVNKNRRMLASLQRQFDKLLGSLQDGEKQSPSSFQFNWSEE
STEKTCYHKHSLDGILKEKGKFTAPCNTHYWLSSLRICKGNYCRHPITKSEEANFPRSYL
FVLNLFSFLLGVEVSTVHEEVCQVEHKLFPAKKSKILSKKYKRV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagagacgagagattacaaagatccctgtttgcagtgctctgatattaac
tggggtattagcgatgaaggcaaattttattgcaagtcctgtcataatgttattgagaaa
acgaaagagtgtgctgagtctgaggtgtttatgcattatgcaaaagccttttccatctcc
aggggactgaagaacaaacgcaaattagataagagttgtgaatggtatgtctgtgaaggt
tttcagtttatcctgaagcagcaggcagagtctcttctgtcattgggggtgtgctcacag
ataaaagatgaaattatatgcaatttttggcggcgatatctgcagaagagtcgtcaggcg
tacaccagcaagcaattaccacaatatgcgagaccagaaagtaattctgagtgcagtacg
gagtgggagagcgagccagagtctctgaacttgagcaattggtcacttgcttctgaaagt
gaacctgtgacttgccactctgatagcagtttggcacaagaatcttcgtgtgggaaaacc
tcaacattggaaactgcatccatttgctctggatcgatcgatggtagagaacatatgtct
gcaaatcgacgtgggaaattggtgatgactatgccaatgaccttggcattctgctacatg
gcattgctgtggctcagagaaccgttgactttggcagatcttctgcggcttgttgcagaa
gaccatataccatacataaacacctatcagttttttccagaagaggtgaaattatttgga
gtggacttgagaatttttaaagtacagtctgtcccatcatatgaaaagatacaggaaacc
atgcgtcgtcttgcactattcctggacttgccacaatttccacaagtgactgaaacctgc
tttcttcatcctgacatgctgtgcatcaagtatttaatggaggctaacttaccagacgaa
gtgcataactggacctgcaaggttgtaaagaagacgggtgttggagaatctgcattttta
acatttgaccctttgcaaaaacagaggacaaacggctatgagttgcaagcagcagctgtg
attgtggtcacgctcaagttgttgtttttattagatgacaagtatgaatggatgatgtca
aatcttgcagaagaactaaatgaagatgctgtggacatgaagtattttgaatttagaaaa
tggtgcaagacaatgaagagctgtttgaatgaagcagagaagaaagtggaagaagatgcc
acaaggcatttgtgggtgtgtgacaagctgttgtattctacaagtaaagagaaaccactg
gttaataaaaacagacgtatgctagccagtttgcaaaggcaatttgacaaacttctaggc
tccttacaagatggtgagaagcaaagtccttccagtttccagtttaactggagtgaagaa
agtacagaaaagacatgttaccataagcacagcttagacggaatcctaaaagaaaaaggc
aaattcactgccccatgtaatactcattattggctcagttcactgagaatttgcaaagga
aactactgcagacacccaataaccaaatctgaagaagcaaattttccaaggagttactta
tttgttctgaatcttttctctttcctgctgggggtggaggtctctactgtacatgaagag
gtgtgccaagtagaacacaaactctttcctgcaaaaaaatcaaagattctgtcaaagaaa
tataaaagggtgtga
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