Latimeria chalumnae (coelacanth): 102360569
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Entry
102360569 CDS
T02913
Symbol
ITGB5
Name
(RefSeq) integrin subunit beta 5
KO
K06588
integrin beta 5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04145
Phagosome
lcm04148
Efferocytosis
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
lcm04810
Regulation of actin cytoskeleton
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102360569 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102360569 (ITGB5)
04148 Efferocytosis
102360569 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102360569 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102360569 (ITGB5)
04810 Regulation of actin cytoskeleton
102360569 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102360569 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102360569 (ITGB5)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102360569 (ITGB5)
Cell adhesion molecules [BR:
lcm04515
]
Integrins
Integrin beta subunits
102360569 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
I-EGF_1
EGF_2
RNA_pol_A_CTD
DUF2975
Motif
Other DBs
NCBI-GeneID:
102360569
NCBI-ProteinID:
XP_014344922
LinkDB
All DBs
Position
Un
AA seq
672 aa
AA seq
DB search
MQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLTEEMKKLTSNFRLGFGSFVDKNI
SPFSYTASKYQNNPCLGYKLFPNCVPSFGFRHLLSLTDKVDRFNEEVQKQMVSRNRDAPE
GGFDAILQAAVCQEKIGWRKEASHLLVFTTDDVPHLALDGKLGGLVQPNDGNCHLNEKNE
YGASTQMDYPSLALLGEKLAENNIHLIFAVTKSHYVLYKDFTALIPGTTVEILDQDSKNI
IQLIVNAYNNIRSKVELTVSTHPGYINLAFTATCQDGLARPGLRKCGDLKTGDTVSFDVS
VEARSCPPEGTRHGFTIKPVGFRDLLEVTVTYDCVCRCSKLTEATSSKCSGNGTYECGSC
KCDPGFLGAKCECQEGEGSSLYQTMCREVEGKPVCSGRGKCSCSQCICYESEFGKIYGQF
CECDDFSCARHKGVLCSGHGECHCGECKCHAGYIGDNCNCSIETDTCISSDGQMCSSRGN
CVCGRCQCAHPGAFGDTCEKCPTCPDACGSKRDCIECRLYSSGRLADNQTCQKLCKDEII
TVDVLKTDEQDAVLCLYKTENDCVMRFTYLEHTSGKSVLTVLKEPECGSPPDAMTVLLAV
VGSILLVGIALLAIWKLLVTIHDRREFARFQSERSRAKYEMASNPLYRQPISTHNVETMF
NMRSKSYNGTVD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcggcaggtggaggactatccagttgacttgtactacctgatggatctctcc
ctttccatgaaggacgacttggacaatatccgtaacttgggaaccaaactgactgaggag
atgaagaaactcactagcaactttcgtctgggctttggatcttttgtggataaaaatata
tcgcccttctcctacacggcctctaaatatcagaataacccatgcctgggttataagtta
tttccgaactgcgttccttcctttgggtttcgccatctgctctccctgactgataaggtg
gaccggttcaacgaggaggtccagaagcagatggtatccaggaaccgagacgccccagag
ggaggctttgacgcaatcctgcaagcggcagtgtgccaggaaaagataggctggcggaag
gaggcgtcccacctcttggtatttaccacagacgacgtaccccacctcgctctggacggg
aaactcggggggctggtgcagcccaacgatggaaactgtcacctgaatgagaagaacgaa
tacggagcctccactcagatggattatccgtctctcgcacttctgggagagaagttggcg
gaaaacaatatccaccttatatttgctgtcacgaaaagtcactacgttctctacaaggat
tttacagcactgatacccggaaccacggtggaaatcctggatcaagactctaaaaatatt
attcagctgatagttaatgcttataataatatccgctctaaggtagaactgaccgtttca
actcaccctggttacatcaatctggctttcactgctacttgtcaagacgggcttgcacgt
ccgggactgaggaagtgcggtgacctcaaaaccggagacacggtgtcgtttgatgtgagt
gtggaggccaggagttgcccgcctgagggcaccaggcacggctttacgatcaagcctgtg
ggattccgggatttgctggaggtgacggtgacctacgactgcgtctgtcggtgctccaag
ctgacggaggctaccagcagcaaatgcagcggcaacgggacctacgagtgcggctcgtgc
aagtgcgaccccggctttttgggggccaagtgtgaatgccaggagggggagggcagtagc
ctctatcagacgatgtgccgggaagtggaagggaagccagtctgcagcgggaggggcaag
tgcagctgtagccagtgcatctgctacgaaagtgagttcggaaagatatacggacagttc
tgtgagtgcgatgacttctcctgtgccaggcacaaaggcgtcctctgctcaggtcacggg
gagtgtcactgcggagaatgcaaatgccacgccggctacatcggggacaactgtaactgc
tcgatcgaaacggacacgtgcatctccagtgacgggcagatgtgcagcagccgggggaac
tgtgtctgtggaaggtgtcagtgtgcccaccctggggcctttggggacacctgcgagaag
tgcccaacatgtcctgatgcctgcggttcaaaaagagattgtatcgaatgcagattgtac
agttcgggaagactggcggacaatcagacttgtcagaaactctgcaaagatgagattatc
acggtggacgtcctcaaaacggatgagcaggacgcagtgctgtgtttgtataagactgaa
aatgactgtgttatgagattcacctacttggaacacaccagcggcaaatctgtcctgacc
gtcttaaaagaaccagaatgtgggagcccaccagatgcaatgacggtcctgcttgcagtg
gttggcagtattttgctggtaggcatcgcgctgcttgcgatatggaagctgctcgtcacc
atccatgaccggcgggagtttgccaggttccagagcgaacggtccagggccaagtatgaa
atggcctcgaacccactgtatagacagcctatttcaacacacaatgtggagaccatgttt
aacatgcgaagcaagtcctacaatgggacagttgactga
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integrated database retrieval system