Latimeria chalumnae (coelacanth): 102361296
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Entry
102361296 CDS
T02913
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102361296
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
102361296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOS1_NGEF_PH
RhoGEF
PH
IQ_SEC7_PH
RHG20_PH
CRAL_TRIO_2
PH_10
Motif
Other DBs
NCBI-GeneID:
102361296
NCBI-ProteinID:
XP_006008359
LinkDB
All DBs
Position
Un
AA seq
2266 aa
AA seq
DB search
MDREPLEDCIQSALSALYPPFEATAPTLLAQVFDLVEKTYCEDALRYTIEFLVPAKHILQ
RLQQEACAQYNGFLFRHEGWPLCLHEKVVVQLSALNWQALQPGDFYLQMIPYLERSPKLV
LKCLSRDGFSVQEVIVPEESYPYIFTVEWLNGINKDRNTTRLETCLLSADSGVVRVSWQE
VVYPQFIHKEGITVGSRHSEGGLTRRSPDGIEAIRTQGYNFLEISTAPVDQFVGPEEVLS
NPLSETSKRTQEKCKSTKEYIAETHRGTTCLEKFVELEEASTEDIEGEYVELLDIANPKY
PPQQESPSIDSRQKYLEMNGISKTKTVPLQKGHNKNRNRRHKPWMHAKPSKDDFQCLNKK
PGSRSSPKPRAVQSDVWDAYKSAEYSSSDIDANVISDGRSHVCTETMLESDADTELFGVR
PTLATADFITGVEAESTGINKLGCMSATGNLHQKDEEDYALPQGETERKDIPTVDFQTLR
ANLVFLEDGVLEATLLDSKGEVGPSCLASSEAVLDDHCASHFAPANQESTNQREDAKRSS
QTLNQIWTSNDAIKVANISCKNSNHSGSIVSDSFNAGDISKSEDTSKEVATTKGDVAVTS
LSKHLESTLDQSTKLHPVVECSHPALQLPMEREAAPCLFGDITELKDGNSSSPVAFNEDM
KAELTEAVGCHHGSHEQLLIRQVDQEHTQQSLDDSTKDHCCTTEMVQSVSVTDLKDQQTE
TQVQAHVAETDCNSKPTSQNTDNEQLPNEPSCTNCKHTGKPKASSCTNHDLKAETLEVFI
ETHSLAGCKFQVSSEAQPLAEQGQWNLSTGLSLAGMYTERAQQNITDTSKESQRILTGEV
HLSGDSSSASNQVEGNTEGARGAVDTQQMPKRNANSKAKKKKKKKGKRVGKSEGLKKQES
RDCGSATPIHADLGTSAGDAMEKIPGDEITSEGTPSEASGASASVHGGTETEPSSEVNGG
GDGLALQSLHKAEEEQVGSPKWNNLGDSAPIDPTCQISDEGTSSPAPQTAPNTESAEREE
LTVQSQGSSQLAPPPPGCPSYLQDVNQEILQSGVFCLTGSRDRHGRVMVVMMADNPLWQS
WCYSSVEAARVLMYYQSIPRQEVRDLGLTVLVDACASAPLSALFEILCTFQEFVPNGIHS
VLVLLEEDSPVCMKNLPNMQVEIVTSLQALQKHIDPAQLPQRLGGGFPYSHQEWIDYRTR
VEKFGGICREVISYLQSVIHVLETRRLPQQTQDIPSLIEQHQALMMDVLADRRLTRLQLE
GGTTLARLHKENSHISVTEDYRDSISVTSTLYNEAEDCIHQLVKVSNQYLRGLEALMKLQ
ELEERLCKVCNWIDQHGEQQLLAFQEPEDSLEILRLRQQEFQKFSQLALGQCLEGQEVLK
EMESCNLIGSLELTDLKERVRPHREKLLGFSERLEQRRLLLEKMLKLSQFFTQARDWTLE
AQRQLANIPPQDCESPSRCASALASLEQYRRNLMEIPEAQFLEMKELAQELQDEKALRQW
AFCWEKCQDAKQAYSWRLELATNTRSLTASVELPRKRSGSFGLGASGRKGGWRPWGNNAT
LTPSRSMTSLNAKAPACQEWLDASPSLQTLACLKDAMQDSDEEIFSEFRRGPGFNLGKSS
DPSHMPTLKLGELALRDSGRRSTTSLSEAPSSTTSSPFLQRRTQALRRILRKAQSFEGPQ
SEGPRSGWHQRTLSEPGGATRMGNTGVHIKGLEVSSTEVVDRTCSPKEHVMFGRASSLMA
DAPWGVTPKLDRRDHDSKVQPMVAELVAGEQEYVMALTYVAENYFPEMERRGLPQELRGK
RGVVFGNLEKLRAFHEHCFLREMEGCLSHPQRLAQCFLRYRDQFGLYALYAKNKPKSDAL
MASYGNAFFKRRQEELGDSMDLASYLQKPLQRLNTYAQILEDMLGECGQENPQDLCLLQA
AAEMVRFQLRHGNDLLMVDAIQGCDVNLKEQGHLIHKDEFTIWYGRKKFVRHVFLFEELV
LFSKAKHTDGKADSYTYKHSFKTADIGLTENIGDSGLRFEIWFRKRKSKESYILQASSPD
VKQAWTKDIAQLLWHQAMRNKEVRIQEMVSMGIGNKPFLDIKASDDPISDRTVDYFLTGR
GSRTRASVAVSSFNHTGLFRSPSSSSSIHAHTSSSSSMLGSLNLHTFSTRYLAAGMVGCA
HPFEDCIEEELEFDTSSQPSVVTQSSGSSSGRSQHERKDNNSSSGSSGVATSRERESHPK
RGGVLPQGAENCSPKGPWMHRSQENSGREDLSKSSDLATLSPSTAV
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgagccacttgaggactgcatccagagtgcactctctgccctctacccaccc
ttcgaggccactgctcccactctgctggctcaggtctttgacctggtagagaagacctac
tgcgaggatgccctgcgctacactattgagttcttggtgccggccaaacacatcctgcag
cgcctccaacaggaggcctgtgcacagtacaatgggttcctcttccgccatgaggggtgg
cccctttgtctccatgaaaaggtggtggtgcagctctctgcactcaactggcaagccctg
cagcctggggacttctatcttcaaatgatcccctatctagaaagatctccaaagctggtc
ctaaagtgcctgtcccgggatggtttcagcgtccaggaggtgatagtccccgaggagtcc
tacccatacattttcacagtggagtggctgaatggcatcaacaaggaccgtaacacaacc
aggctggagacctgtctcttgtctgctgacagcggtgtggtgagagtgtcatggcaggag
gtggtctacccacagttcatccacaaggaagggatcactgttggcagcagacactcagaa
ggtggacttacaaggaggagtccggatggcattgaggcaatcagaacgcaaggctataat
tttctagaaatatctactgctcctgtagaccagtttgtgggacctgaagaggtgttatcc
aatcctctttcagaaaccagcaaaagaacacaagagaagtgcaaatcaaccaaagagtac
attgctgaaactcacaggggtaccacttgcttggagaagtttgttgaattggaggaggca
tccacagaagacattgaaggagaatacgtcgagcttttggatattgccaatcccaaatat
cctccccagcaggaatctccaagcattgactcgcgtcagaagtatctggagatgaacggg
atatccaagaccaagactgttcccttacagaaagggcacaataagaatcgaaaccgaagg
cataagccatggatgcatgccaagccttctaaagatgactttcagtgtttaaacaaaaag
cctggatccagaagcagcccaaaaccaagagctgtccagtctgatgtctgggacgcttat
aaatctgcagaatattcatcatcagacattgatgcaaatgtgattagtgatgggcgctca
catgtatgcactgagacaatgcttgaaagtgatgcagacacagagttatttggagtgaga
cctactttagctacagctgacttcatcacaggggttgaagcagaaagcactggcataaat
aaattggggtgcatgtctgcaactggtaacttacatcaaaaagatgaagaagattatgcc
ttgccacagggagaaacggaaagaaaagatatccctactgtagactttcagactttgaga
gccaatttagtcttccttgaggatggggttcttgaagctaccttattggattccaaaggt
gaggtagggccatcctgccttgcatcttcggaagctgtccttgatgatcactgtgcatcc
cactttgcgccagcaaatcaagaaagcacaaaccaaagagaggatgccaagagatcttct
caaaccctcaaccagatatggacttctaatgatgctataaaagttgcaaacatctcatgc
aagaatagcaatcactcaggaagcattgtgtctgatagctttaatgcaggagatatttcc
aagtctgaggacacctctaaggaggtggctactaccaagggtgatgttgcagtgacctca
ttatcaaagcacctggagtctaccttggatcaatcaacaaagctccatccagtggtggaa
tgcagtcacccagccttgcagctaccaatggaacgtgaagctgccccttgtttgtttgga
gacatcactgagctgaaagatggaaattcaagctcaccagtggcttttaatgaagatatg
aaggcagagctgactgaggctgttgggtgccatcatggatcacatgagcagctgttgatc
agacaagtagatcaagaacatacccaacagtcattggacgacagcactaaagatcattgt
tgcactactgaaatggttcagtctgtttcagttacagatctaaaggatcaacaaacagag
acccaggtgcaagcccatgtggctgaaactgactgcaattctaaacccacatcccaaaac
acagacaatgagcaacttcctaatgaaccttcctgtactaactgcaaacacaccggcaag
ccaaaagccagctcttgtacaaaccatgacctcaaagctgaaacgcttgaagtttttata
gaaacacattccttggctggttgtaaattccaggttagctctgaagcccagccattggct
gagcaaggacagtggaatctgagcacaggcctctcattggctggaatgtacacagaaagg
gcccagcaaaatataaccgacacctccaaagaaagccaaagaatactgacaggggaggtc
catttgtctggtgacagcagcagtgccagtaaccaggtggaggggaacacagagggagcc
agaggggctgtagacacccagcagatgccaaaacgcaatgccaactccaaagctaaaaag
aagaaaaagaagaaagggaagcgggttgggaaatcggaaggcctgaagaaacaggagagc
agggactgcgggagtgccacccccatccatgctgatctgggaacttcagctggagatgca
atggaaaaaattccaggggatgagattaccagcgaaggaaccccatcggaggcctctggg
gcatccgcctctgtccatggaggtacagaaacagagccaagttcagaagtcaacggtggt
ggtgatggcctggcattgcagtcacttcataaggcagaagaggaacaggtgggcagccca
aaatggaacaacctaggagactctgctccaatcgacccaacctgtcagatttcagacgag
ggcaccagctcacctgcccctcagactgctccgaacactgagtcagccgaaagggaggag
ttaactgtccaatcacaggggtcttctcagctagctcctcccccaccaggatgcccctcc
tacctacaagatgtcaatcaagaaatcttacaatcaggagtgttttgcctcacaggcagc
agagacagacatggccgagtcatggtggtgatgatggctgacaatccgctgtggcagagc
tggtgctattctagtgtggaggctgctcgagttctcatgtactatcagtccattccaaga
caggaagtgcgtgatcttggcttgacagttctggtagacgcctgtgcctcggcaccactc
tctgcactctttgagatcctttgcacattccaggagtttgttcccaatggtatccactca
gttttggtacttctggaggaagactcccctgtgtgcatgaagaatctccccaacatgcag
gtggagattgtgacctctttacaggctctacagaaacacattgacccagcacagctcccc
caaaggcttggagggggatttccctactcacaccaagaatggattgactatcgtacgagg
gtggagaagtttgggggcatctgccgagaggtgatcagttaccttcagagtgtgattcac
gtcctggagactcggagacttccgcagcaaacacaagatattcccagtttaatcgaacag
caccaggcgctgatgatggatgtgctggctgaccgaaggctgacacgtctccagctcgaa
ggtgggacgaccctggcccgcctgcacaaagagaactcacatattagtgttactgaggac
tacagggactccatatctgtgacctccactctctataatgaagcagaagattgcatccat
caactggtgaaggtttctaatcagtacctgcgtggtctcgaggccctcatgaagctccag
gagttggaggagaggctgtgcaaggtctgtaactggattgaccagcacggagagcagcaa
ctgctagcgttccaggagccagaagattccttggagatcctgagactgaggcaacaggaa
ttccagaagttcagtcagctagctttgggacagtgcctggagggacaggaggtcctgaag
gagatggaatcctgcaatctgattggttctctggagctgactgatttgaaggagagggtg
cggccgcaccgggagaaactgctgggattctctgaacggctggagcagaggcgcctcctg
ctggagaagatgctgaagctcagccagttcttcactcaggctcgggactggactttggaa
gcccagcgacaactggcaaacatcccaccacaggattgcgagtccccatcccgctgtgct
tcggccctcgcttccctggagcagtaccgccggaacctcatggaaattcctgaagcccag
ttcctggagatgaaggaactggctcaggagctgcaggatgagaaggctctcaggcagtgg
gccttctgctgggagaagtgccaggatgccaagcaggcctacagctggagactggaactg
gcaacgaacaccaggagcctcacggcctctgtagagctgccaaggaagcgctcaggcagt
tttgggctgggggccagtggcaggaaaggggggtggaggccttggggcaacaatgctacc
ctcaccccttccagaagtatgacgtcactcaatgccaaagcgcccgcctgccaggaatgg
ctggatgcatccccatcattgcagacactggcgtgtttgaaggatgccatgcaggacagt
gatgaggagatcttctcagagttccgaagaggtcccggcttcaacctggggaagagttct
gacccttctcacatgcctacactgaagttgggcgagctggccctgcgggattctgggagg
aggagcaccacgtcgttgtcggaggcaccctcttccaccacgtcctccccttttctccag
cggcggacccaggccctgcgcaggatactgcggaaggcgcagagcttcgagggcccccag
tctgaggggccccggtctggctggcaccagagaacactgagtgagccaggaggagccacc
aggatgggcaacacaggggtccacatcaaaggcctggaggtcagcagtactgaagtggtg
gatcgcacctgctcccccaaggagcatgtcatgtttggaagagccagcagcctaatggcg
gatgcaccttggggagtcaccccaaagctggacaggagagaccatgacagcaaggtccag
ccgatggtggcagagctggtggccggagagcaggagtacgtgatggccctcacctatgtg
gcggagaactacttcccggagatggagcggcgaggcttaccacaggagctgcgcggcaag
cgcggggtggtctttggcaacctggagaaactgcgtgccttccacgagcactgcttcctg
cgagagatggagggatgcctgagtcacccgcagcggctggcgcagtgtttcctgcgatat
agagaccagtttgggttgtatgcactctatgcaaagaataagccgaagtcggacgctctg
atggcaagttatggcaatgctttctttaagcgcagacaagaggagctgggagattccatg
gatttggcctcctacctccagaagcctctccaacggttgaacacatatgcccagatcctg
gaggacatgctgggagaatgtggccaggaaaacccccaagatctctgcttgctgcaggct
gctgctgagatggtcaggttccagcttcgccacggcaacgacctgctcatggttgacgcc
atccaaggctgtgacgttaatctgaaggagcagggccacctcatccataaggacgagttt
accatttggtacggcaggaagaagtttgtgcgtcatgttttcctcttcgaagaactggtc
ctcttcagtaaagccaagcacacggatgggaaagcagactcttacacctacaagcactcc
ttcaagacagcagacattggtctgacagagaacatcggcgatagcgggttgcgtttcgag
atctggttccggaaacggaaatccaaggagtcgtacattctgcaagccagctctccggat
gttaagcaagcctggaccaaagatattgcccaactgctatggcaccaagctatgcgtaac
aaagaggtccgtatccaggagatggtttccatggggattggaaacaagccctttttagac
atcaaagccagcgatgacccaatcagtgatcggacagtggactactttctgacagggaga
ggttcccgaactcgagcgtcagttgctgtatcttccttcaaccacactggactcttccgg
agcccatcttcttccagcagcatccatgctcatacttcctcctcctcctccatgctgggg
tctctgaacctgcacaccttctccacacgttacctggcagctgggatggtagggtgcgcc
caccccttcgaggactgcatcgaagaggaattggagtttgacaccagcagtcagccttct
gtggtcacccagagctcagggtcctcctctggcaggagtcagcatgagcggaaagacaac
aacagcagcagtggcagcagcggtgtggcgacgtcccgcgagagggagtcccatcccaaa
aggggaggagtcctgccacagggggcagagaattgctccccaaaagggccctggatgcac
aggagccaggagaacagcggccgggaggacctctccaagagttctgacttggcaacattg
agcccatctactgcagtctga
DBGET
integrated database retrieval system
