Latimeria chalumnae (coelacanth): 102361559
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Entry
102361559 CDS
T02913
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04261
Adrenergic signaling in cardiomyocytes
lcm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
102361559
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102361559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102361559
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102361559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
FraC
Lustrin_cystein
SieB
SurA_N_2
IQ
Motif
Other DBs
NCBI-GeneID:
102361559
NCBI-ProteinID:
XP_014351318
LinkDB
All DBs
Position
Un
AA seq
1981 aa
AA seq
DB search
MATLFIPRGPDTFRRFTRESLAAIEKRIDEEQAKSAKQEYKEEQEEEEKPRVSLDLEAGK
KLPHIYGDFPKQLIGVPLEDLDPIYSTKRTFIVLNRGKAIFRFSASKALYVFSPFHPVRR
AAIKILVHSLFNIFIMCTILTNCVFMTRSEAELWTKYVEYTFTGIYTFESMIKILARGFC
LEQFTFLRDPWNWLDFSVIVMAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVRKLADVMILTVFCLSVFALIGLQLFMGNLRNKCVRNFLPLNQSEGGNISWSNDTE
PSWETFINKEANYYKINGAKDPLLCGNTSDTGNCPDGFTCLKTGSNPNYGYTSFDTFGWA
FLALFRLMTQDYWETLYQQTLRAAGKTYMIFFVVVIFLGSFYLVNLILAVVAMSYEEQNQ
ATIAEAEKKEKEFQQAMEQLRKEQEALASRGDETISRSSSEISPLALKDSKERRNRMRRN
KSIEGRDGYGEKGEKVTKSESENSLQTMSLLGVQDPNSAFRRLSHGSIFKFRMRHSSEPE
FTNDKLSITGEHESRRASLFISRFGRRNSMQSQISQGSRRTTPSLTSNGKMNSSVDCNGV
VSLVGNTGACTSTPVLPAGLLLPLVTIDRPAADDSVIEKVVAGLLREHLDTFDFYDQFQS
GLRPGHSVDTAVVKVVSNLLVAIDKELEESHQKCPPCWNHFAEKHLIWDCCPLWIEVKEW
VKFVVMDPFVDLAITICILLNTLFMALEHYPMTKEFTDMLSVGNLVFTGIFTAEMVFKII
ALHPYYYFQQGWNIFDSIIVSLSLMELGLSSVEGLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYHDYVHKIGVEGRLPRWHMNDFFHS
FLIVFRVLCGEWIETMWDCMQVSGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSADNL
SAPDEDGEMNNLQIAFARIQRGLYFLARTFQNVLCNLLAQKAAPEENKTMMNLSSPPQTY
CMVNHTGADTGKDLGSKDENGTTKGIKRKGGRCGNDPEGLLANPSLSVPIAIGESDSEYH
EEDEQSTFTEIEMSKEKLDDSCSEGSTVDLRKSGEIDEQMTEQAEEEADPEECFTEGCVR
YFSCCQIDTTQGNGKVWWNLRKTCYKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKT
IKVIMEYADKVFTYVFVLEMLLKWIAYGFKKYFTNAWCWLDFLIVDVSLVSLAAHALGYS
ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFGKCINTTTKVKLSPEIVNNKTQCENLGMESVNWTIVKVNFDNVGAGYLALLQVA
TFKGWMDIMYAAVDSREVEEQPIWEKNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQ
KKKISGEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFIFDIVSKQAFDIFIMV
LICLNMVTMMVETDDQPKKMEIILYNVNLVFIVVFSGECALKIIALRQYYFTIGWNIFDF
VVVVLSIVGIVLADIIKNYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYAIFGMANFAYVKKESGIDDMFNFETFGNSMICLFQITTSAGWDGL
LNPILNKGPPDCNPNITHPGNTAVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILEN
FSVATEESTEPLSEDDFEMFYEVWEKFDPEATQFIEYSKLSDFADALQDPLRIAKPNKIK
LIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALKLQMEDKFMAANPSKISYEPITT
TLRWKQEEVSAIIIQRAYRRHLLQRSMKQASFLYRHRTCDGNIIQEEAPEKEGLIATIIN
EHFGRQLEKVEIVASPLSPPSYESVTRTTSDNTQLMERDSDQMDGLINDKKDNDKDKESF
V
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctttttataccacggggtcctgataccttccgccggttcactcgtgagtcc
ctggccgctattgagaagcggattgatgaggagcaagcaaagtctgccaagcaggaatac
aaagaggaacaggaagaggaagagaaacctcgggtcagtctcgacctggaggctggcaag
aagctgcctcatatctacggagacttccccaagcaactcattggagtgcccctggaagac
cttgaccctatttacagtaccaagaggacgtttatagtactgaacagagggaaggcaatc
ttccgttttagcgcctcaaaagcactatacgtgtttagtcctttccatcctgtcagaagg
gcagcaattaaaattttagtacattcattgtttaatatatttattatgtgcactattcta
accaactgtgtgttcatgactcggtctgaagctgagctatggaccaaatacgttgagtac
actttcactggcatttatacttttgaatcaatgataaaaatactggcaagaggattctgc
cttgagcaattcaccttcctccgagatccatggaactggctggatttcagtgttattgtt
atggcgtatttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagg
gtactgagagctttgaaaactatttcagtaatcccaggcttgaagactattgtaggtgct
cttatccaatcggtcaggaagcttgcagacgtaatgattctgactgtgttttgcttgagc
gtctttgccctaattggccttcagcttttcatgggcaacttacggaacaaatgtgtcaga
aatttccttcctctcaaccaatcggaaggcggcaatatcagttggagtaatgacactgag
ccatcttgggagacgtttataaacaaggaagctaactactacaaaataaatggagccaaa
gatcctttactctgtggaaacacttcagatactgggaactgcccagatggatttacatgc
ttaaagactggaagtaatccaaattatggctacaccagttttgatacctttggctgggct
tttcttgctctgttccgtttgatgacacaagactattgggagaccctctatcaacagact
cttagagctgccggaaaaacctacatgatcttctttgtggttgtcattttcttgggttcc
ttttatcttgttaacctgatcctggctgttgtagccatgtcttatgaagagcaaaatcag
gccaccattgctgaggctgagaagaaggagaaggaattccaacaggctatggagcagctt
aggaaagagcaggaggcacttgctagtagaggagatgagacaatatcgcgcagttcttcc
gaaatatcacctttagctttaaaggattccaaagaaaggagaaacaggatgaggaggaac
aaatccatagaggggcgtgatggatatggggaaaagggagaaaaagtaacaaaatcagag
tcggaaaacagcctgcaaacgatgtctcttcttggagttcaagatccaaactccgctttt
cgcagactcagccatggaagtatttttaagttcagaatgcgacatagctcagagccagaa
tttacaaatgacaagctcagcatcacgggggagcatgaaagtcgcagagcctccctgttc
atctctaggtttggacggcgaaacagcatgcagagtcaaataagccaagggtctcgtcgt
acaactcccagcctgacatctaatgggaaaatgaacagttctgtggactgtaatggggtg
gtctcactagttggaaacacaggagcctgcacctcaacaccagttttgcccgcaggatta
ctactgccattagtcactatagacagaccagctgcagatgacagtgttattgagaaggtt
gtagctggattgcttagggagcacctggatacatttgacttttatgaccagtttcagtct
ggtttaaggcctggtcatagtgtggacactgctgtggttaaagtggtgagcaatctcctt
gttgcaatagataaggaacttgaagaatcacaccaaaagtgccctccgtgttggaatcac
tttgcagagaagcatctcatttgggactgttgccccctttggatagaagtaaaagaatgg
gtaaagtttgtagtaatggacccatttgtggatctggctatcaccatttgcattctgttg
aacaccctcttcatggctctggaacactacccaatgactaaggaattcactgacatgctt
tctgtaggcaacctggttttcactggaatattcacagctgaaatggtgtttaaaatcatt
gcccttcatccttactactacttccagcagggctggaacatctttgacagcatcattgtc
agtctgagcctgatggagctgggtttatctagcgtggaaggtctatcagtcttacgttcc
ttcagattgcttcgagtcttcaagctggcaaaatcatggcccacgttgaacacccttatt
aaaatcatcggcaactcagtgggtgccctgggtaacctcacactggtcctggccattata
gtcttcatctttgctgtggtaggaatgcaactctttgggaaaaactaccatgactatgtc
cataagattggtgtagaaggtcggctgccacgctggcacatgaatgatttcttccactca
ttcctcattgtgtttcgtgtcctgtgtggggagtggattgagaccatgtgggattgtatg
caagtttctgggcaacctttatgcatccttgtcttcatgctggtcatggtgataggaaac
ctggtggtgctcaacctgttccttgccttgctgctaagctcttttagtgctgacaatctc
tcagctccagatgaggatggagagatgaacaatctccagatagcatttgccaggattcag
cgcggactctactttctggcccgcacctttcagaatgtcttgtgcaacctccttgcacag
aaggcggcacctgaagaaaataagaccatgatgaacctttctagtccaccccaaacatat
tgcatggttaaccatactggtgctgacacaggaaaagacctgggttccaaggatgaaaat
gggacaacaaaaggaatcaagagaaaagggggcagatgtggtaatgatccagagggcttg
ctggccaaccccagtctgtctgttcccattgccattggagagtcagactcagaatatcat
gaagaagatgaacaaagtaccttcacagaaatagagatgagcaaagagaaactggatgac
tcttgctctgaaggcagcacagtagacctgagaaaatctggggagatagatgaacagatg
acagagcaggctgaagaagaagcagaccctgaggaatgtttcacagaaggttgtgttcgt
tatttctcatgctgtcaaatagacacaacccagggaaatggcaaagtttggtggaatctg
aggaaaacctgctacaaaattgtagagcataactggtttgaaacattcatcatattcatg
atcctgttgagcagtggagctttggcatttgaagatatctatattgaacagcggaagact
atcaaggtcattatggaatatgccgataaagtgttcacatatgtttttgttctggaaatg
ctcctgaaatggattgcatatgggtttaagaagtattttaccaatgcatggtgctggcta
gacttcttaatcgtggatgtctctttagtaagccttgcagctcatgcgctgggatactct
gaactaggtgccattaagtctcttaggaccctcagagcattgagaccattaagagcattg
tcacgatttgaagggatgcgggttgtggtaaatgccttgatcggtgccattccttccatc
atgaatgtattgctggtgtgcctcatcttctggcttatatttagcatcatgggagtgaac
ctttttgcgggaaaatttggcaagtgcataaacactaccacaaaagtaaaacttagccct
gagattgtcaataacaaaactcagtgtgaaaatttggggatggagtctgtcaactggact
atagtcaaagtcaactttgataatgtaggagctggatacctcgctcttctgcaagtagca
acatttaaaggctggatggatattatgtatgcagcagtggattcccgtgaggtagaggaa
cagcccatctgggagaaaaacctgtacatgtatctctactttgtcatttttatcatcttc
gggtcgtttttcacactcaacctgttcattggtgttattatcgacaatttcaaccaacaa
aagaaaaagataagtggagaggatattttcatgactgaggagcagaagaagtactataac
gcaatgaaaaaactggggtcaaagaagccacaaaagccaattccaaggcccttgaacaaa
ttccaaggattcatttttgatattgtatctaagcaagcttttgacatattcataatggtt
cttatctgccttaacatggtgactatgatggtggaaactgatgaccaacccaaaaaaatg
gagatcatcctttacaatgtcaacctggtattcattgttgtattcagtggagaatgtgct
ctcaaaatcatcgcccttagacagtactacttcactattggctggaacatatttgatttt
gtggtggtggttctctccattgttggaattgtgcttgctgatatcattaaaaactatttt
gtatcccctacgctcttccgagtcatccggctagctcgtattgggcgtgtccttcgactt
atcagaggagcaaaagggatcagaacccttctctttgccttaatgatgtccctcccagcc
ttgttcaacattggccttctgcttttccttgtcatgttcatttatgccatttttggcatg
gctaactttgcctatgttaaaaaagagagcggaatcgatgacatgttcaactttgaaaca
tttggcaacagtatgatctgtctcttccaaatcacaacctcagctggttgggatgggctt
ctcaatcctattttgaacaaagggcctccggactgtaacccgaatataacacatcctggt
aacactgcagtaaaaggagactgtggaaacccatctgttgggatatttttctttgtcagt
tacatcattatatcttttctcattgttgtaaacatgtatatagcaattatcttggagaat
ttcagtgtggccacagaggagagtacagagcctctaagtgaggatgactttgaaatgttt
tatgaagtctgggaaaagtttgacccagaggctactcagtttattgagtattcaaagctt
tcagattttgcagatgcactgcaggatcccttacgcattgcaaaaccaaataagataaag
ctcatagcaatggatctcccaatggtcagtggagatagaatacactgcttggatattttg
tttgcttttactaaaagggttttgggggaatctggagaaatggatgctcttaaactacag
atggaagacaaatttatggcagctaatccatctaaaatatcttatgagccaattaccacc
acacttcgatggaagcaggaggaggtgtctgccataattatccagcgggcctacagaagg
cacttactccagcgttccatgaagcaggcctcttttttgtatcgtcatagaacttgtgat
ggcaacatcattcaagaagaagcaccagaaaaggaaggccttattgcaacaatcattaat
gaacattttggaagacagctagaaaaagtggaaatagtggcctccccattatctccacca
tcctatgagagtgtcaccagaaccactagtgacaatacccaactgatggagagagactct
gaccagatggatggactaataaatgataagaaagacaatgacaaagataaggaatccttt
gtgtag
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integrated database retrieval system
