KEGG   Latimeria chalumnae (coelacanth): 102361561
Entry
102361561         CDS       T02913                                 
Symbol
PRDM4
Name
(RefSeq) PR/SET domain 4
  KO
K12463  PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcm03000]
    102361561 (PRDM4)
Transcription factors [BR:lcm03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    102361561 (PRDM4)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 Zn_ribbon_PRDM4 zf-C2H2 zf-C2H2_4 C2CH-3rd_BIRD-IDD zf-Di19 zf-C2H2_jaz zf-C2H2_16 SET DUF5810 zf-C2H2_15 Zn_ribbon_Com zf-met S-antigen PyrI_C
Other DBs
NCBI-GeneID: 102361561
NCBI-ProteinID: XP_006008265
Ensembl: ENSLACG00000007452
UniProt: H3AFJ7
LinkDB
Position
Un
AA seq 795 aa
MNDMNLSPVGMDQLNAPSVSSHLELTTSPTHNPIPAPGMPVAIPNLGPSLGSLPSALSLM
LPMGIGDRGVMCGLPERNYTLPPPPYPHLESTYFRHILPGILSYLADRPPPQYIQPSAIN
VDSNPPLSVSSNPSSLEHYQPSGSVGLEPSMVPLDSRQVGAQSLHPSDSRDVPLDAIETV
ARVTSPISTEGMEEELAMDGVGREHQQIVSGSRSHENLAVDSVGGSLSSDTVGHSSSGGS
GVSLHSSTLELPVVMDAEHMAGRAGSLSESALSDAIHTVALSANSVSVALSTSHTLIPLE
PVPLHGTAIGLEPVAVSSIAQEIPMGPSHVDVSSETLAFVPVSLQMEDSNSNKENMATSF
TIWCTLCDRAYPSDCPEHGPVTFIPDSPIESRARLSLPRQLSLRQSITGAEIGVWTRETI
PVRTCFGPLIGRQSHSVEVADWPDKMANHIWKMYHNSALEFCIITTDENECNWMTFVRKA
RTREEQNLVAYPHEGKIYFCTSQELHPDQELLFYYSKDYARQIGAPEQPDMHVCHCGKEC
SSYTEYKSHESTHSQTHSPSQSQGSRHASGHHREGLRKWKCSMCPRAFTSSTKLNVHFLG
HMGMKPHKCEFCSKAFSDPSNLRTHLKIHTGQKNYRCTVCDKSFTQKAHLVSHMVIHTGE
KNLKCDYCDRMFMRRQDLKQHALTHTQERQISCPKCDKLFWRTNHLKKHLNSHEGKRDYI
CEKCSKAFLTKYHLTRHLKICKGPKSGLSPHDLDEEEEDEDDEEEDEELIDAADTGDCRI
NGAYSAEESRSRQKH
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgaatgacatgaacttgagtcccgtagggatggaccagctcaatgctccgtctgtcagc
agtcatttggaactaaccacatcaccgacgcacaatcccatacctgccccaggaatgcct
gtggcgatcccgaacttgggcccgtctctggggtctctgccctcggctttgtccctcatg
ctgcctatgggaataggggaccgaggtgttatgtgtggccttcccgagaggaactacacc
ctaccccctccgccatacccccacctggaaagtacttacttcagacacatactaccaggt
atcttatcctatttggctgaccgtcctccacctcagtacattcagcccagcgccatcaat
gtggacagcaatccacctttatcagtctcaagtaatccctctagcctggagcactatcaa
cccagtggatctgtaggattggaacctagcatggtgcctcttgactcccggcaggtgggc
gctcagagtttgcaccctagcgacagccgcgatgtgcccttggatgctatagaaaccgta
gccagggtgaccagtcccatctccacagaggggatggaagaggagttggcgatggatggg
gtaggaagggagcaccagcagattgtgagtggttctcgcagtcatgagaacttagcagtg
gactcagttggggggagtctatcctcggacacagtaggacacagcagcagcgggggcagc
ggcgtatcccttcactccagcaccttggaactgcctgtggtgatggatgctgagcacatg
gctggcagggcaggcagcctctctgaaagtgcgctgagtgatgccattcacacggtggcc
ctcagcgcaaactctgtgagcgtggcactctccacatcgcatactctgatccccctggag
cccgtcccactccatgggactgccattggcctggagccagtggccgtgtcatccattgca
caggagattcccatggggccaagccatgtagacgtgtcttcagaaactcttgcctttgtg
cccgtttctctacagatggaggactccaactcaaacaaggagaatatggcgacttctttc
actatctggtgcactctttgtgaccgggcctatccctcagactgtccagagcatgggcct
gtcactttcattccggacagccccattgagagccgagccaggctgtctctcccaaggcag
ctcagtcttcgccaatccataaccggagcggaaattggtgtatggactcgagaaactata
cctgtgcgtacatgctttggtcctctgattggacggcagagccattctgtggaagtagcg
gattggccagacaaaatggccaaccatatttggaagatgtaccacaacagtgccttggag
ttctgcatcatcacaacagatgaaaatgagtgcaactggatgacctttgtccgtaaagca
aggactcgggaagaacagaatttggtggcctatccccatgaaggcaaaatttacttctgc
acttcacaagaactccacccagaccaggagttgctgttttactatagcaaagattacgcc
cgacagataggtgccccggagcagcccgatatgcatgtttgccactgtggaaaagaatgc
tcttcctacacagagtacaagtctcacgagagcacccacagccaaactcactccccgagc
caaagccaagggagcaggcatgccagtggccaccatagagaaggccttaggaagtggaag
tgctccatgtgcccccgggccttcacctcgtccaccaagctcaatgtccacttcttgggt
cacatgggcatgaagccacataagtgcgagttctgcagcaaggccttcagtgaccccagc
aacctgcggactcaccttaagatacacacaggtcagaagaactacaggtgtacagtttgc
gacaagtctttcacacagaaagcccacctggtgtcccatatggtcatccacacgggggag
aagaacttaaagtgtgattactgtgacaggatgttcatgaggaggcaggacctgaaacag
cacgcacttacccacacgcaagaacgacagataagttgccccaagtgtgacaagctgttt
tggcggaccaaccatttgaagaagcacctcaactcacatgagggaaagcgggactacatc
tgtgagaagtgctcaaaggccttcctcaccaaatatcatctcaccaggcacctcaaaatt
tgcaaaggaccgaaaagtgggctctctccccatgacctggatgaggaggaagaggacgag
gatgatgaggaagaagatgaagagttaatcgatgctgccgatactggagactgcagaatt
aatggggcatattcagctgaggagtctcgatccaggcagaaacattag

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