Latimeria chalumnae (coelacanth): 102361561
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Entry
102361561 CDS
T02913
Symbol
PRDM4
Name
(RefSeq) PR/SET domain 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102361561 (PRDM4)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102361561 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-Di19
zf-C2H2_jaz
zf-C2H2_16
SET
DUF5810
zf-C2H2_15
Zn_ribbon_Com
zf-met
S-antigen
PyrI_C
Motif
Other DBs
NCBI-GeneID:
102361561
NCBI-ProteinID:
XP_006008265
Ensembl:
ENSLACG00000007452
UniProt:
H3AFJ7
LinkDB
All DBs
Position
Un
AA seq
795 aa
AA seq
DB search
MNDMNLSPVGMDQLNAPSVSSHLELTTSPTHNPIPAPGMPVAIPNLGPSLGSLPSALSLM
LPMGIGDRGVMCGLPERNYTLPPPPYPHLESTYFRHILPGILSYLADRPPPQYIQPSAIN
VDSNPPLSVSSNPSSLEHYQPSGSVGLEPSMVPLDSRQVGAQSLHPSDSRDVPLDAIETV
ARVTSPISTEGMEEELAMDGVGREHQQIVSGSRSHENLAVDSVGGSLSSDTVGHSSSGGS
GVSLHSSTLELPVVMDAEHMAGRAGSLSESALSDAIHTVALSANSVSVALSTSHTLIPLE
PVPLHGTAIGLEPVAVSSIAQEIPMGPSHVDVSSETLAFVPVSLQMEDSNSNKENMATSF
TIWCTLCDRAYPSDCPEHGPVTFIPDSPIESRARLSLPRQLSLRQSITGAEIGVWTRETI
PVRTCFGPLIGRQSHSVEVADWPDKMANHIWKMYHNSALEFCIITTDENECNWMTFVRKA
RTREEQNLVAYPHEGKIYFCTSQELHPDQELLFYYSKDYARQIGAPEQPDMHVCHCGKEC
SSYTEYKSHESTHSQTHSPSQSQGSRHASGHHREGLRKWKCSMCPRAFTSSTKLNVHFLG
HMGMKPHKCEFCSKAFSDPSNLRTHLKIHTGQKNYRCTVCDKSFTQKAHLVSHMVIHTGE
KNLKCDYCDRMFMRRQDLKQHALTHTQERQISCPKCDKLFWRTNHLKKHLNSHEGKRDYI
CEKCSKAFLTKYHLTRHLKICKGPKSGLSPHDLDEEEEDEDDEEEDEELIDAADTGDCRI
NGAYSAEESRSRQKH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacttgagtcccgtagggatggaccagctcaatgctccgtctgtcagc
agtcatttggaactaaccacatcaccgacgcacaatcccatacctgccccaggaatgcct
gtggcgatcccgaacttgggcccgtctctggggtctctgccctcggctttgtccctcatg
ctgcctatgggaataggggaccgaggtgttatgtgtggccttcccgagaggaactacacc
ctaccccctccgccatacccccacctggaaagtacttacttcagacacatactaccaggt
atcttatcctatttggctgaccgtcctccacctcagtacattcagcccagcgccatcaat
gtggacagcaatccacctttatcagtctcaagtaatccctctagcctggagcactatcaa
cccagtggatctgtaggattggaacctagcatggtgcctcttgactcccggcaggtgggc
gctcagagtttgcaccctagcgacagccgcgatgtgcccttggatgctatagaaaccgta
gccagggtgaccagtcccatctccacagaggggatggaagaggagttggcgatggatggg
gtaggaagggagcaccagcagattgtgagtggttctcgcagtcatgagaacttagcagtg
gactcagttggggggagtctatcctcggacacagtaggacacagcagcagcgggggcagc
ggcgtatcccttcactccagcaccttggaactgcctgtggtgatggatgctgagcacatg
gctggcagggcaggcagcctctctgaaagtgcgctgagtgatgccattcacacggtggcc
ctcagcgcaaactctgtgagcgtggcactctccacatcgcatactctgatccccctggag
cccgtcccactccatgggactgccattggcctggagccagtggccgtgtcatccattgca
caggagattcccatggggccaagccatgtagacgtgtcttcagaaactcttgcctttgtg
cccgtttctctacagatggaggactccaactcaaacaaggagaatatggcgacttctttc
actatctggtgcactctttgtgaccgggcctatccctcagactgtccagagcatgggcct
gtcactttcattccggacagccccattgagagccgagccaggctgtctctcccaaggcag
ctcagtcttcgccaatccataaccggagcggaaattggtgtatggactcgagaaactata
cctgtgcgtacatgctttggtcctctgattggacggcagagccattctgtggaagtagcg
gattggccagacaaaatggccaaccatatttggaagatgtaccacaacagtgccttggag
ttctgcatcatcacaacagatgaaaatgagtgcaactggatgacctttgtccgtaaagca
aggactcgggaagaacagaatttggtggcctatccccatgaaggcaaaatttacttctgc
acttcacaagaactccacccagaccaggagttgctgttttactatagcaaagattacgcc
cgacagataggtgccccggagcagcccgatatgcatgtttgccactgtggaaaagaatgc
tcttcctacacagagtacaagtctcacgagagcacccacagccaaactcactccccgagc
caaagccaagggagcaggcatgccagtggccaccatagagaaggccttaggaagtggaag
tgctccatgtgcccccgggccttcacctcgtccaccaagctcaatgtccacttcttgggt
cacatgggcatgaagccacataagtgcgagttctgcagcaaggccttcagtgaccccagc
aacctgcggactcaccttaagatacacacaggtcagaagaactacaggtgtacagtttgc
gacaagtctttcacacagaaagcccacctggtgtcccatatggtcatccacacgggggag
aagaacttaaagtgtgattactgtgacaggatgttcatgaggaggcaggacctgaaacag
cacgcacttacccacacgcaagaacgacagataagttgccccaagtgtgacaagctgttt
tggcggaccaaccatttgaagaagcacctcaactcacatgagggaaagcgggactacatc
tgtgagaagtgctcaaaggccttcctcaccaaatatcatctcaccaggcacctcaaaatt
tgcaaaggaccgaaaagtgggctctctccccatgacctggatgaggaggaagaggacgag
gatgatgaggaagaagatgaagagttaatcgatgctgccgatactggagactgcagaatt
aatggggcatattcagctgaggagtctcgatccaggcagaaacattag
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