Latimeria chalumnae (coelacanth): 102361565
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Entry
102361565 CDS
T02913
Symbol
LRRC4C
Name
(RefSeq) leucine rich repeat containing 4C
KO
K07523
netrin-G1 ligand
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102361565 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102361565 (LRRC4C)
Cell adhesion molecules [BR:
lcm04515
]
Immunoglobulin superfamily
NGL family
102361565 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
V-set
Ig_2
LRR_9
LRRNT
Ig_6
DUF7617
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
102361565
NCBI-ProteinID:
XP_005986968
Ensembl:
ENSLACG00000013655
UniProt:
H3B0U0
LinkDB
All DBs
Position
Un
AA seq
641 aa
AA seq
DB search
MLNKMILRPQQTMIGPRSNRALFDPLLVALLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLRDVPDGISTNTRYLNLQENQIQVIKVDSFKHLRHLEILQLSKNHIRTIEIGAF
NGLTNLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLGMCNLRDIPNLTPLVKLDELELSGNQLSVIRPGSFQ
GLVHLQKLWMMHAQIQVIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHH
NPWNCNCDILWLSWWLKEMVPSNTTCCARCHTPASLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTIMTHGAYKVRISVLNDGTLNFTNVTVQD
TGLYTCMVSNSAGNTTASATLNVTATENNSVTYFTTVTVETMEPSLDDTRTTEHNVGPTP
TSSWETTNVTTSLIPRSTRSTEKTFTIPITDAGETGVPGLDEVMKTTKIIIGCFVAITLM
AAVMLIIFYKMRKQHHRQNHHAPTRTVEIINVDDGITGDTPIESHLPMPSIEHEHMNHYN
TYKTPFNHTTTVNTINSIHSSVHEPLLIRANSKDNVQETQI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgatattacgtccacagcagacgatgataggtccaagatctaacagg
gctctgtttgaccccctgcttgtggcgctgttggctcttcaacttctcgtggtggctggc
ctggtccgggctcagacctgcccttctgtctgttcctgtagcaaccagttcagcaaagtg
atctgtacgcggcgcaaccttcgggacgtccccgacggcatctccaccaacacacgctat
ttgaatctccaagagaaccagatccaggtcatcaaagtggacagcttcaagcacctgagg
catcttgagatcctgcagctcagcaagaaccacataaggaccatcgaaattggggccttc
aacggcttgaccaacctcaacacgttggaactctttgataatcggcttaccacaatccca
aatggggcttttgagtacttgtccaaactaaaggaactttggctaaggaacaaccccatt
gaaagcatcccgtcatatgcttttaatcgagtcccttctttgagaaggttggatttagga
gaactgaagaggctctcatacatttcagaaggtgcctttgaaggtctgtcaaacctgagg
tacttaaatctcggaatgtgcaaccttcgtgatattccgaatctcacgccacttgtgaag
ttggatgagttagaactttcgggcaaccagttgtctgtaattaggccaggttcctttcaa
ggtttggttcacttgcagaaactgtggatgatgcatgcccagattcaagtgattgagagg
aacgcttttgatgacctccagtcactggtggagctgaacctggcacacaacaacttgaca
ttgctgcctcatgacctctttacaccactccaccatctagagagggttcacttgcaccat
aacccttggaattgtaactgtgacatcctttggctcagctggtggctaaaggagatggtg
ccctcaaacacaacctgctgtgcccgctgccacacacctgctagcttaaaaggcaggtat
attggggaactggatcagaattatttcacatgttatgctccggtcatcgtggaacctcca
gcggacctcaatgtgactgagggcatggcagccgagttgaaatgtcgggcgtccacatcg
ctcacttctgtgagttggattacgccaaatggaacaataatgacccatggagcatacaaa
gttcgaatttctgtgctaaacgacggcacgctaaatttcactaatgtaactgttcaagac
acaggtttatacacgtgtatggtgagtaattctgcagggaatacaacagcctcagccacg
ctaaatgtcacagcaacagaaaataacagcgtcacttacttcacgaccgtcacggtagag
actatggaaccttcgctggacgacacgaggaccacggagcacaatgtggggcccacgccg
accagcagctgggagacgaccaacgtgacgacctcactcatcccacggagcacgaggtcg
acggagaagaccttcaccatccccatcacggacgcaggggagacgggcgtgccagggctg
gacgaggtgatgaagacgaccaaaatcatcatcggctgctttgtggccatcaccctcatg
gcggccgtgatgttgatcatcttctacaagatgcgcaagcagcaccatcggcagaaccac
cacgctccgacacggaccgtggagattatcaatgtggacgatgggatcacaggggacact
cctatagagagccatctacccatgccttccatagagcatgaacatatgaaccactacaac
acttacaaaactcctttcaaccacacgacgacagtaaatacaataaattcaatacacagt
tcagtgcatgaaccactgttaattcgagcaaactcgaaagacaatgtacaggaaactcaa
atttaa
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