Latimeria chalumnae (coelacanth): 102361635
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Entry
102361635 CDS
T02913
Symbol
JARID2
Name
(RefSeq) jumonji and AT-rich interaction domain containing 2
KO
K11478
protein Jumonji
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102361635 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102361635 (JARID2)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102361635 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
102361635 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
102361635
NCBI-ProteinID:
XP_014351634
LinkDB
All DBs
Position
Un
AA seq
1257 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRHHGDGGSAKNTNGP
FINGQSNGSGPNSLEKDDGSQASSHTNDGSSDSEDGPVRKRPRLQAQRKFAQSQPNSPST
TPIKRVEPLLPPPSTQISDLSKRKPKTEDFLTFLCLRGSPALPSSMIYFGSSQEEDDVAE
EEEEDCEDVKSVTNAASSSCHSTPRKGKVQGKHVLNGHVLNGSNRSSREKEMVHKHKSKE
ATPGKERNSEPNSQKEQTTIAAAAAANSTASNAGLSAKGLAANSQTLGKSAQDLRRQVSK
VNGITRASSLGAHTASVRKVREVRSSLSKTVKYTAMVTKGNVTYTKAKRELVKETKLNHH
KHSGAVNHTISGKSESSNAKTRKQVLSAGASKSSCVKVNGRVNGRACTKEEVRPGREGLR
NSKRRLEEASPVEKLQSSTKKMKVAVSSPETRSKKANVEKSLPNGHIKSETPEKNLERQR
PKRASAGKNAAGKQAHNKTETSASETRSTSATDSSHKLQDSTVKLEKSSSKAGWSTLCEV
PVLRPTMKEFHDPLAYLESVRAQVEKYGMCQVIPPSDWRPECKLNEEMRFVTQVQQIHKL
GRRWGPNVQRLACIKKHLKSQGITMEEPPLIGGCELDLARFFQLINDMGGMQQVTDLKKW
NKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDLLTPEEHKRLEKEVLAEKENLERKKGPL
EGHSENAHNSQCLPRFEPKNGLINGVVHKNGFRSKLKEIDAQLKTGRRRLFAQEKKASEE
ETGVLADLHKCIYKGRSVSLTTFYRIARNIMNMCFSKEPTASEVEQEYWRIAEQKDCHVA
VHSGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNSGSILRHLGAVPDYILKTCLSDTG
LCLNLFMPQKTAYLNLLLCSLLDRTINIILVPLLGTRHCIYLTVCLSSLPLPLLLSPRYC
IPAEEESKLDKVVHTLLQANGTPGLEMLESNIMISPEVLSKEGIKVYRTVQHSRQFIVCF
PGAFVSKVCCGYSVSETVHFATTQWTSMGYEAAKDLKRRCIAKPFSMEKLLYQIAMAEVK
RENGQTLSTIASLLEELRNIELKQRQQLFEAGLHSSARYGSHDNNQAGMDGKKKPRKWLP
IETSERRCQMCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQINS
LVNQICGKVSGKILNSNSDVSTSKPTLKRGPRKRATIDVPSSRFSSSNSSKSASSSS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatataattcagaagaaatacgatgacagtgatgga
attccatggtcagaagagagggtggtgcggaaggtcctttacttgtccctgaaggagttc
aaaaacgcacagaagaggcaccatggcgatggaggcagtgccaaaaacacaaacggtccc
ttcataaacggccaatcaaacggatcgggcccaaactcgttggaaaaagatgatgggtca
caggcatcttcgcacaccaatgatggcagttcagactctgaagacggcccagtcagaaag
aggccaaggctgcaagcacaaagaaaatttgcccagtctcaacccaactctcccagtaca
accccaataaagagagtggagcccttgttaccacctccgtctacacagatctcagacctc
tccaagcggaagcccaaaacggaagatttcctcacgtttctctgccttcgaggctcccct
gccctgcctagcagtatgatatactttggaagttctcaggaggaagatgatgtagctgag
gaggaggaggaggattgtgaagatgtgaagagtgttacaaatgctgcctcgtcttcatgc
cattctactcccaggaaaggaaaagtacagggcaaacatgtcctgaatggacacgttttg
aatggatccaacagatcgtccagagagaaagaaatggttcacaaacacaaaagcaaggag
gccacgccagggaaagagaggaacagtgagcccaacagccagaaggagcagactaccatc
gccgctgccgctgctgctaacagcactgcttcaaatgcaggcctttcggccaagggtctt
gctgcaaatagccagactctcggtaaatcagctcaggacctcagaagacaggtttcaaaa
gtaaatggaatcactcgagcatcatcacttggcgcccacacagcaagtgtcagaaaggtt
agagaggtcaggtcttcactgtccaaaactgtgaagtacactgcaatggtgacgaaggga
aatgtcacatacaccaaagccaagagagaactggtcaaagaaaccaaactgaatcatcat
aaacacagtggagctgttaaccacacaatctcagggaaatcagaaagtagcaatgcaaaa
acacgcaaacaggtgctatccgctggagcgtccaagtccagctgtgtcaaagtcaatggc
agagtgaatgggagagcttgcacaaaggaggaggtgagaccaggaagggaggggttgcgg
aactccaagaggaggctggaggaggccagtcctgtggagaaactgcagtcttcaaccaag
aaaatgaaagtagcagtgagctcgccggaaactagaagcaaaaaggcaaatgtagaaaag
tctttacccaatggacacataaagagcgaaacaccagagaagaacttggaaaggcagagg
cctaagagggcttctgcaggaaagaatgcagcaggaaaacaagcacacaacaaaacggaa
acctctgccagcgaaacgcgttctacctcagctactgattcctcgcacaagctgcaggac
tcgacggtgaagcttgaaaagagcagcagcaaggcgggctggtcaacgctatgcgaagtc
ccagtcctcaggcccaccatgaaggagtttcacgaccctctcgcttacctggagtcagtc
agagcccaggtggagaaatacgggatgtgccaggtgatacccccctcggactggaggcca
gagtgcaaactcaacgaggagatgcggttcgtgacacaagttcagcagatacacaaactg
gggaggcgctggggacccaatgtacaacggctggcttgcatcaagaagcaccttaaatct
cagggcattaccatggaagagcccccactcataggaggttgtgagctggatctggcccgc
tttttccagctgatcaatgacatgggcggcatgcagcaagtgactgacctcaaaaagtgg
aacaaactggcggacatgctgcgaatccccaagactgcacaggacaggctggccaagctg
caggaggcctactgccagtacctgctctcgtacgacttgctgacaccggaggagcacaag
aggctggagaaggaggtcctagcggagaaggaaaacctggaaaggaagaagggccccctg
gagggacactcggagaacgcccacaactcccagtgcctgcccaggtttgagcccaaaaac
ggactcatcaatggggtggtgcacaaaaacggcttccggagcaagctgaaagagatagac
gctcaacttaaaacgggcagacggcggctgtttgctcaggaaaagaaggcaagcgaagag
gaaactggagttcttgctgacctgcacaagtgtatatacaagggaagatcggtttcttta
acaacgttctaccggatcgcaaggaatataatgaatatgtgcttcagtaaggagcccaca
gcctctgaagtagagcaagagtactggaggatagcagaacagaaggattgccatgtggcg
gtgcattctgggaaagtggatacaaacacacacgggagcggcttccctgttggaaagtct
gaaccgttttcaaggcatgggtggaacctcacagtccttcctaataattcaggatccatc
ctgcgacaccttggtgctgtgcctgattatatactgaagacctgcttgagtgacacaggc
ctgtgtctgaacctctttatgcctcagaaaactgcctatctaaatctgttactgtgctcc
ctactagacaggaccattaacattatcctggtgccgctactgggtacacgtcactgtata
tatctaactgtgtgcctttcctccctgccccttcccctgctcctttcacctaggtattgc
attcctgctgaggaggagagcaaacttgataaagtagtgcacaccttgctgcaagccaac
ggcactccagggctggaaatgcttgaaagtaacataatgatctccccagaggtgctgtca
aaagaggggatcaaggtgtaccgtactgtacagcacagcaggcagttcattgtctgcttc
cccggagccttcgtgtcaaaagtgtgctgcggctacagtgtttcggaaactgtgcacttt
gctaccacccagtggacaagcatgggctatgaagctgctaaggacttgaagcgtcgctgc
attgcaaagccattttcaatggagaagctgttgtaccagatagccatggcagaggtgaaa
cgggagaatgggcagacgctgagtacaatcgcttcgctactggaagagctcaggaatata
gaattgaaacaacgtcagcagctctttgaggcagggctgcattcttcagcccggtatggt
agtcatgacaacaaccaggctggtatggatgggaagaaaaagcctcgaaagtggctgcca
atagaaacttctgagaggagatgtcagatgtgccagcacctgtgttacctttcaatggtt
gtacaagaaaatgaaaatgttgtgttctgtttggaatgtgcgcttcgccatgtagaaaaa
cagaagtcctgccgtgggttaaagttgatgtatcgctatgatgaggaacaaatcaacagt
ttagtcaaccagatctgtggaaaagtatcggggaagatcttgaacagcaacagtgacgtt
agcaccagcaagcctacgctgaaacgggggcctcgaaaacgcgccaccattgatgtgcca
tcatctaggttttcatcctccaactcatccaaaagtgcttcaagttcttcatga
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