Latimeria chalumnae (coelacanth): 102361724
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Entry
102361724 CDS
T02913
Symbol
TSEN2
Name
(RefSeq) tRNA splicing endonuclease subunit 2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcm03016
]
102361724 (TSEN2)
Enzymes [BR:
lcm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
102361724 (TSEN2)
Transfer RNA biogenesis [BR:
lcm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102361724 (TSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
102361724
NCBI-ProteinID:
XP_014349011
LinkDB
All DBs
Position
Un
AA seq
618 aa
AA seq
DB search
MAEAVFCAPRRKRRVFETYEASLPVPTTQEEANLSIPRVYQAELFNNHVIVRHPGDIEVL
YKKGYFGKGILSRSKPEYYVSDPLLAAKWKGINVTRMPVISSAKYQHHVDWARSILQEQG
LDQCTVNKTLADYTQQIDISFHMLDEKNKKSTKRNCCTAAEVTGVENSQAASDPTLASER
KNSCSGTDQAIVPTLGTGKCTVKKTPLALPQGSDEPFLELDKKNAATNGTLNAEVMAIEN
DDTLLNDQGLPPDEELAGSGEEQVVQLCDSEACTVNKIPAGCPQHIEKALPGLDEENKEA
TEGNCSLVAQAAAANNSSLLNDEAFTPDGDTPCKSPSKKKPCLEGNTLYDPLAKYKCNDP
DQVDIEASAKVHCHKHDDLIVDCGCRNEDLIKELFHKHSPKDSEFPPDHEYVLVQEEEEH
LANENEGLGKNLVKENLVCRRNPYRIFEYLQLSLEEAFFLVYALGCLTVYYEEKPLTIAE
LWDICGVLHPTFKTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASFSVVVEMV
DYCYQGVPRRPFSWRSLCGLNRITANVSKELLLCYLIKPSDMTDEDLSSPECMRRIKVQE
LLLNRWVSSRERTEQDEI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgttttttgtgctccaagaaggaagaggagagtttttgaaacctatgaa
gcttcacttcctgtccccacaacccaggaagaagcgaacctgagcatacctagggtgtac
caagcagagctgtttaataatcatgtgattgtgaggcatcctggtgacatagaagttttg
tataaaaagggctactttggaaaaggcattctgtccagaagtaaacctgaatactatgtt
tcagaccctttactggctgcaaagtggaaaggtatcaatgttacgcgtatgcctgtaatc
tcatcagcaaagtaccagcatcatgttgactgggctaggagcatcctgcaagagcaaggt
ttggaccaatgtacagtaaacaaaactctcgcagattacacccagcaaatagacatttct
ttccatatgctggatgagaaaaataagaaaagtactaaaagaaactgttgtactgctgct
gaagtgacaggtgttgagaacagccaggcagcaagtgatccaaccttggcatctgaaagg
aagaactcatgcagtggtacagatcaagccattgtgccaacactggggacaggaaaatgc
acagtaaagaaaactcctctagccttaccccagggtagtgatgaaccttttcttgagctg
gacaagaaaaatgcagcaacaaatggcactctgaatgctgaagtgatggctattgaaaat
gacgacacattgctaaatgatcaaggtttgcctcctgacgaggaactagctggtagtggt
gaagaacaagttgtacaattatgtgattcagaagcatgcacggtaaataaaattcctgca
ggttgtcctcagcatattgaaaaagctttacctggactggatgaggaaaataaagaagct
acagaaggaaactgctctcttgttgcacaggcagcagctgctaataactcctccttatta
aatgatgaagctttcacccctgatggtgacactccatgcaaaagtccaagtaaaaagaag
ccttgcttagaaggaaatactttgtatgaccccttagctaaatacaaatgtaatgatcct
gatcaagtggacattgaagccagtgccaaagtacactgtcataaacatgatgatttgatt
gtggactgtggctgtagaaatgaagacctaattaaagaattatttcacaaacattcaccc
aaagactctgagtttcccccagatcatgaatatgtgttggtgcaagaagaagaagagcac
ttggccaatgagaatgagggattgggtaaaaatctggtaaaggagaatttagtctgcaga
agaaacccatacaggatatttgaatatttgcagctcagcttagaagaggcctttttcttg
gtttatgctttaggatgcttaacagtgtattacgaagagaagccattaactattgcagag
ctttgggatatctgtggtgtgcttcatcctacttttaaaaccacatacatggcataccat
tattttcggagcaagggctgggtgccaaaagtgggactgaagtatggaacagatctgttg
ttatatcgaaaaggacctcctttttaccatgcaagtttctctgtagtggtggagatggtt
gattactgctatcagggtgttcctcgtaggcctttcagctggaggtcactatgtggcctc
aacagaattacagccaatgtctctaaggagcttctgctctgttatttgattaaaccgtct
gatatgaccgatgaagacttgtcctctccagaatgtatgagaagaattaaagttcaagaa
cttcttctgaatcgctgggtttcttcacgtgaacgtactgaacaggatgaaatataa
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