Latimeria chalumnae (coelacanth): 102361761
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Entry
102361761 CDS
T02913
Symbol
CFAP52, WDR16
Name
(RefSeq) cilia and flagella associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102361761 (CFAP52)
Cilium and associated proteins [BR:
lcm03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
102361761 (CFAP52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_like
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WDR54
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
102361761
NCBI-ProteinID:
XP_014340142
Ensembl:
ENSLACG00000012206
UniProt:
M3XI68
LinkDB
All DBs
Position
Un
AA seq
619 aa
AA seq
DB search
MSVDGSQDGVVELELEVIIGFNGQVPAGLIAHPDRENILYPLGCTVIIQSLKNKKQSFLH
GHTNNVCCLGVSRDGTYLASGQVTYMGFKADVIIWNYAQRELYARLSLHKAKVQSVAFSP
NGLYLATLGGQDDGSLVIWNVAKKEAICGSPASAVSSGNALTVKFSNHSDEIFITAGNTT
IRVWELDLPNRKIRSSECQTGQLKRIVNCIEISEDDAFFYCGTTTGDILKLGLKNKLLSS
YAPQKEKFGLGVTALALLKTGDFLVGSGDGFVALCKPSTLKIVKKAHLHGAVNSIALRGE
GHQFFAGTGCAQIYRFNYVEFKEELIAACHNEAVNDIAFPFGTSELFATCSKSDIRVWHT
QSKKELLRITIPNMTCHGIDFMKDGKSIISGWNDGKIRAFTPESGRLMYVINNAHSIGVT
AIAAIGSCKRIVSGGGEGMVRVWEIGQGFNTLIESMKEHKASVSCIRVKSNDQECVTAST
DGTCIIWDIVRFVRNQMVLANTLFRCVCYHPEGYQIITSGTDRKIAYWEVFDGTPIRELE
ASVSGSVNGMDISQDGKYFATGGDEKLIKLWGYNEGEVTHVGIGHSSSIIRLRICPMGRY
IISVSADGAILLWRYPYVS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggacggtagccaggacggagtcgtggagctggaactcgaggttatcattggt
ttcaatggacaggtacctgccgggctgattgcccatcctgaccgggaaaatatcctctac
cccttgggctgcacagtcatcattcaaagtctaaagaataaaaaacagagctttctgcat
ggccacaccaacaatgtttgctgtctcggtgtaagcagagatggaacctaccttgcttct
gggcaggtcacttacatgggctttaaggcagatgtcattatctggaactacgcacaaaga
gaactctatgcaagactatccctgcataaggcaaaggttcaatctgtggcattttctcct
aatggcctttacctggcaactcttggaggtcaggatgatggcagccttgttatctggaac
gtggcgaagaaagaagcaatctgtggcagcccagcctcagctgtcagttcaggaaatgcc
ctgactgtgaagttctccaaccatagtgacgagattttcatcacagcaggaaatacaaca
attcgtgtctgggagctggacctgccgaacagaaagattcgatcaagtgaatgtcaaact
ggacaactgaagagaattgtgaactgtattgaaatatctgaggacgatgctttcttctac
tgtggaactacgactggagacattttaaaactgggcctgaaaaacaagcttctcagcagc
tatgcgccccagaaggagaagtttggtttgggagtgacagcactggcattgctgaagaca
ggagatttcctcgtgggatcaggagatggttttgttgctctgtgcaaaccctcaacctta
aaaatagtcaagaaagcgcatttacatggggcagtaaactccatcgcactacggggcgaa
ggtcaccagttctttgctggcactggatgcgcacagatttaccggtttaactatgtcgag
tttaaggaagaactcattgccgcatgccacaatgaagctgtcaatgacattgcttttcct
tttggaacatctgaactctttgctacatgttcgaagagtgacatccgggtatggcacacc
cagtccaagaaggagctgttacgaatcactatccccaatatgacctgtcatggcattgat
tttatgaaggatggaaagagcatcatcagcggttggaatgatgggaagatccgtgccttc
acccctgagagtggtcgcttgatgtatgtcattaacaacgcccacagcataggagtgaca
gccattgctgctattggcagctgtaaaaggattgtcagtggaggcggggaagggatggtg
agagtgtgggagattggtcagggcttcaacacgttgatagaaagcatgaaggaacataag
gcctctgtatcttgcatcagagtaaagagtaacgaccaggaatgtgtgacagccagcacc
gatggtacctgcatcatctgggacatagtgcgctttgtgaggaatcagatggtcttggcc
aacaccctgttccgctgtgtttgttaccacccggaggggtaccagattatcaccagtggg
accgacagaaagattgcatattgggaggtgtttgatggcactccaatcagagaactggaa
gcctctgtgtctggaagtgtaaacggaatggacatttcccaggatgggaagtactttgct
acgggtggagatgagaagctgattaaactttgggggtacaacgaaggggaggtgacccac
gttggaataggtcacagcagcagcatcattcgcctccgaatctgccccatgggccggtac
attatcagcgtgagcgcagatggagccatcctcctgtggagatacccatatgttagctaa
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integrated database retrieval system
