Latimeria chalumnae (coelacanth): 102361814
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Entry
102361814 CDS
T02913
Name
(RefSeq) survival motor neuron protein 1-like
KO
K13129
survival motor neuron protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102361814
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102361814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
Tudor_2
DUF4537
DUF7464
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
102361814
NCBI-ProteinID:
XP_006002377
LinkDB
All DBs
Position
Un
AA seq
431 aa
AA seq
DB search
MATCEGEIVYQLGDKNEGSDVHDDTALVKAYEKAVQSCKDSLRSNESSDNQEEHEEGESK
PKEKTEKEKKASSEVVCALGGAAPLWHEWKVGDSCRAMWSEDGFVYAATVQSINESKQTC
VVMFEGYGNEDELSLADLLPPSDAVDRNGQERAQWRVGDSCTAVWSEDGAAYSATIKSIN
QSSGMCVVVYRGYGNEEVQNLCDLLPPSDDSEDDSKYLKKQWQVGDPCYAVWSGDGLVYP
AAIKSIHKARRKCVVVYEGYGNEEELSLSDLLPSSYIFTEGKSRRHQEKAGKTRAASSQE
QEQATKKQSKSSKKSSNHWSNWPWPVPPPSPGPLPHVPAYNSTQDYPWYGMPPPHLQGHP
PLVPSWPPVIPPFPPPPPPVTPEFDDDADSTLVCMLLAWYMSGYHTGYYMGLKHGQAKAT
GSSQKKHPKRK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctgcgaaggagaaattgtatatcagctgggagataagaatgaaggctcagat
gttcacgatgacacagccctcgttaaggcttatgaaaaagcagttcagtcatgcaaggat
tccctgagaagtaatgaaagtagcgacaatcaggaggagcatgaggagggagagtccaag
ccaaaggaaaaaactgaaaaggaaaagaaagccagttcagaggtggtgtgtgctttaggt
ggtgctgcacctctgtggcacgagtggaaggttggggattcatgccgtgccatgtggtcg
gaagatggatttgtgtatgctgccactgtccagtccatcaatgaaagcaaacagacctgt
gtggttatgtttgaggggtacgggaatgaggacgagctcagtttggctgatctgctgcct
cccagtgatgctgtagaccgcaatggacaggaaagggcgcagtggagagtcggagattct
tgcactgctgtttggtcagaggatggggccgcctattcagctactattaaatcaatcaac
caaagctcggggatgtgtgtggttgtgtacagaggatatgggaatgaagaagtgcagaac
ctctgtgatcttttgccccctagtgacgacagtgaagatgacagcaaatatttgaaaaag
caatggcaggttggtgacccctgttatgctgtttggtcaggagatggcctggtctatcca
gctgctataaaatcaatacataaagctaggaggaagtgtgtggttgtgtacgaagggtat
ggcaatgaggaagagctcagtctatctgatctgctgccttctagctacatattcacagaa
ggcaagagcaggagacaccaggagaaagctggaaagactagagctgcatcgtctcaagaa
caggagcaagccacaaaaaagcagagtaaaagtagtaagaaatcctcaaaccattggtca
aattggccatggccagttccacccccttctccaggacctcttccacatgtaccagcctac
aacagcactcaggactatccctggtatggaatgcctccccctcatttacaaggacatcca
cccctggtgccatcttggcctcctgtgattcccccttttcctcctccccctcccccagtg
actcctgaatttgacgatgatgctgacagtactttagtctgcatgttactagcctggtat
atgagtggatatcacacaggatattacatgggtcttaaacatggccaggcaaaagctaca
ggatcatcccagaaaaaacaccccaaacggaagtaa
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